RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 BEX3Q00994 111 aa13.57□□□□□ -0.24
HMGB1P8-201ENST00000558211 NEDD9Q14511 834 aa13.57□□□□□ -0.24
HMGB1P8-201ENST00000558211 CALCRLQ16602 461 aa13.57□□□□□ -0.24
HMGB1P8-201ENST00000558211 TRAF7Q6Q0C0 670 aa13.57□□□□□ -0.24
HMGB1P8-201ENST00000558211 TNS4Q8IZW8 715 aa13.57□□□□□ -0.24
HMGB1P8-201ENST00000558211 MBOAT7Q96N66 472 aa13.57□□□□□ -0.24
HMGB1P8-201ENST00000558211 SDF4Q9BRK5 362 aa13.57□□□□□ -0.24
HMGB1P8-201ENST00000558211 SPC25Q9HBM1 224 aa13.57□□□□□ -0.24
HMGB1P8-201ENST00000558211 PAK6Q9NQU5 681 aaPredicted RBP13.57□□□□□ -0.24
HMGB1P8-201ENST00000558211 GNEQ9Y223 722 aaKnown RBP13.57□□□□□ -0.24
HMGB1P8-201ENST00000558211 HTTP42858 3142 aa13.56□□□□□ -0.24
HMGB1P8-201ENST00000558211 ST8SIA5O15466 376 aa13.56□□□□□ -0.24
HMGB1P8-201ENST00000558211 ZIC2O95409 532 aaPredicted RBP13.56□□□□□ -0.24
HMGB1P8-201ENST00000558211 BAG4O95429 457 aaKnown RBP13.56□□□□□ -0.24
HMGB1P8-201ENST00000558211 TXKP42681 527 aa13.56□□□□□ -0.24
HMGB1P8-201ENST00000558211 ARHGAP1Q07960 439 aa13.56□□□□□ -0.24
HMGB1P8-201ENST00000558211 ITGB3BPQ13352 177 aaPredicted RBP13.56□□□□□ -0.24
HMGB1P8-201ENST00000558211 CELF3Q5SZQ8 465 aaKnown RBP13.56□□□□□ -0.24
HMGB1P8-201ENST00000558211 ABHD8Q96I13 439 aa13.56□□□□□ -0.24
HMGB1P8-201ENST00000558211 SPATA33Q96N06 139 aa13.56□□□□□ -0.24
HMGB1P8-201ENST00000558211 SENP7Q9BQF6 1050 aa13.56□□□□□ -0.24
HMGB1P8-201ENST00000558211 FTOQ9C0B1 505 aaKnown RBP eCLIP13.56□□□□□ -0.24
HMGB1P8-201ENST00000558211 TMEM60Q9H2L4 133 aa13.56□□□□□ -0.24
HMGB1P8-201ENST00000558211 ZFAND3Q9H8U3 227 aa13.56□□□□□ -0.24
HMGB1P8-201ENST00000558211 TMPRSS4Q9NRS4 437 aa13.56□□□□□ -0.24
HMGB1P8-201ENST00000558211 TFIP11Q9UBB9 837 aaKnown RBP13.56□□□□□ -0.24
HMGB1P8-201ENST00000558211 TELO2Q9Y4R8 837 aa13.56□□□□□ -0.24
HMGB1P8-201ENST00000558211 SYNRGQ9UMZ2 1314 aa13.56□□□□□ -0.24
HMGB1P8-201ENST00000558211 MYH15Q9Y2K3 1946 aa13.56□□□□□ -0.24
HMGB1P8-201ENST00000558211 FRMPD3Q5JV73 1810 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 MYADML2A6NDP7 307 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 CCDC85CA6NKD9 419 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 NOP56O00567 594 aaKnown RBP13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 AXIN1O15169 862 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 CHMP2AO43633 222 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 GAS7O60861 476 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 FARP2O94887 1054 aaPredicted RBP13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 SGPL1O95470 568 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 GJB1P08034 283 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 DDIT3P35638 169 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 RAB15P59190 212 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 LAMC2Q13753 1193 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 SF3A1Q15459 793 aaKnown RBP13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 GNASQ5JWF2 1037 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 LRCH2Q5VUJ6 765 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 GIMAP8Q8ND71 665 aaPredicted RBP13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 ETNPPLQ8TBG4 499 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 U2AF1L4Q8WU68 220 aaKnown RBP13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 AFG1LQ8WV93 481 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 HAS1Q92839 578 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 SLC5A5Q92911 643 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 ZNF396Q96N95 335 aaPredicted RBP13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 TEKT3Q9BXF9 490 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 TBC1D22BQ9NU19 505 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 TCEAL9Q9UHQ7 104 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 CLIC4Q9Y696 253 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 CENPFP49454 3210 aa13.55□□□□□ -0.24
HMGB1P8-201ENST00000558211 KIAA0100Q14667 2235 aaKnown RBP13.54□□□□□ -0.24
HMGB1P8-201ENST00000558211 CAPN5O15484 640 aaPredicted RBP13.54□□□□□ -0.24
HMGB1P8-201ENST00000558211 DHX15O43143 795 aaKnown RBP13.54□□□□□ -0.24
HMGB1P8-201ENST00000558211 MYL3P08590 195 aa13.54□□□□□ -0.24
HMGB1P8-201ENST00000558211 OR52Z1P0C646 297 aa13.54□□□□□ -0.24
HMGB1P8-201ENST00000558211 NCLP19338 710 aaKnown RBP13.54□□□□□ -0.24
HMGB1P8-201ENST00000558211 GJA9P57773 515 aa13.54□□□□□ -0.24
HMGB1P8-201ENST00000558211 HSDL1Q3SXM5 330 aa13.54□□□□□ -0.24
HMGB1P8-201ENST00000558211 METTL7BQ6UX53 244 aa13.54□□□□□ -0.24
HMGB1P8-201ENST00000558211 RNF180Q86T96 592 aa13.54□□□□□ -0.24
HMGB1P8-201ENST00000558211 CHAMP1Q96JM3 812 aa13.54□□□□□ -0.24
HMGB1P8-201ENST00000558211 FAM20AQ96MK3 541 aa13.54□□□□□ -0.24
HMGB1P8-201ENST00000558211 USP28Q96RU2 1077 aa13.54□□□□□ -0.24
HMGB1P8-201ENST00000558211 JPH1Q9HDC5 661 aaPredicted RBP13.54□□□□□ -0.24
HMGB1P8-201ENST00000558211 KCNMB3Q9NPA1 279 aa13.54□□□□□ -0.24
HMGB1P8-201ENST00000558211 SLC9A2Q9UBY0 812 aa13.54□□□□□ -0.24
HMGB1P8-201ENST00000558211 Q9Y3F1 56 aa13.54□□□□□ -0.24
HMGB1P8-201ENST00000558211 SAMM50Q9Y512 469 aa13.54□□□□□ -0.24
HMGB1P8-201ENST00000558211 NFASCO94856 1347 aa13.54□□□□□ -0.24
HMGB1P8-201ENST00000558211 TBX3O15119 743 aa13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 LILRA1O75019 489 aa13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 ADAMTS4O75173 837 aa13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 TECP42680 631 aa13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 CHMP4BP1P59074 171 aa13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 DNM1Q05193 864 aaKnown RBP13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 ORC2Q13416 577 aaPredicted RBP13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 LRRC41Q15345 812 aa13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 FSCN1Q16658 493 aaKnown RBP13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 BRDTQ58F21 947 aaPredicted RBP13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 UTP14CQ5TAP6 766 aaKnown RBP13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 SLFN12Q8IYM2 578 aa13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 C4orf32Q8N8J7 132 aa13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 ARRDC4Q8NCT1 418 aa13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 MTMR9Q96QG7 549 aa13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 RIT2Q99578 217 aa13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 UPF3AQ9H1J1 476 aaKnown RBP13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 UNC45AQ9H3U1 944 aa13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 TTC12Q9H892 705 aaPredicted RBP13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 PGPEP1Q9NXJ5 209 aa13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 CHMP5Q9NZZ3 219 aa13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 PCDHA12Q9UN75 941 aa13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 CEP131Q9UPN4 1083 aa13.53□□□□□ -0.24
HMGB1P8-201ENST00000558211 TCHHQ07283 1943 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms