RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 NPEPPSP55786 919 aa23.75■■□□□ 1.39
CASC4-204ENST00000557945 TLE2Q04725 743 aa23.75■■□□□ 1.39
CASC4-204ENST00000557945 PTGISQ16647 500 aa23.75■■□□□ 1.39
CASC4-204ENST00000557945 XKR9Q5GH70 373 aa23.75■■□□□ 1.39
CASC4-204ENST00000557945 HYIQ5T013 277 aa23.75■■□□□ 1.39
CASC4-204ENST00000557945 ADALQ6DHV7 355 aa23.75■■□□□ 1.39
CASC4-204ENST00000557945 ANKEF1Q9NU02 776 aa23.75■■□□□ 1.39
CASC4-204ENST00000557945 FAM13BQ9NYF5 915 aa23.75■■□□□ 1.39
CASC4-204ENST00000557945 DNM3Q9UQ16 869 aa23.75■■□□□ 1.39
CASC4-204ENST00000557945 DCDC2CA8MYV0 355 aa23.74■■□□□ 1.39
CASC4-204ENST00000557945 B4GALT4O60513 344 aa23.74■■□□□ 1.39
CASC4-204ENST00000557945 XRCC6P12956 609 aaKnown RBP eCLIP23.74■■□□□ 1.39
CASC4-204ENST00000557945 TMEM119Q4V9L6 283 aa23.74■■□□□ 1.39
CASC4-204ENST00000557945 RESP18Q5W5W9 173 aa23.74■■□□□ 1.39
CASC4-204ENST00000557945 FAM126BQ8IXS8 530 aa23.74■■□□□ 1.39
CASC4-204ENST00000557945 HTATIP2Q9BUP3 242 aa23.74■■□□□ 1.39
CASC4-204ENST00000557945 PANK2Q9BZ23 570 aa23.74■■□□□ 1.39
CASC4-204ENST00000557945 CYP26B1Q9NR63 512 aa23.74■■□□□ 1.39
CASC4-204ENST00000557945 ZBTB42B2RXF5 422 aa23.73■■□□□ 1.39
CASC4-204ENST00000557945 E9PMD0 336 aa23.73■■□□□ 1.39
CASC4-204ENST00000557945 TREHO43280 583 aa23.73■■□□□ 1.39
CASC4-204ENST00000557945 PLCG1P19174 1290 aa23.73■■□□□ 1.39
CASC4-204ENST00000557945 KLRC1P26715 233 aa23.73■■□□□ 1.39
CASC4-204ENST00000557945 HOXC8P31273 242 aa23.73■■□□□ 1.39
CASC4-204ENST00000557945 MARCH8Q5T0T0 291 aa23.73■■□□□ 1.39
CASC4-204ENST00000557945 RRAGBQ5VZM2 374 aa23.73■■□□□ 1.39
CASC4-204ENST00000557945 ANKRD33Q7Z3H0 272 aa23.73■■□□□ 1.39
CASC4-204ENST00000557945 KCNK18Q7Z418 384 aa23.73■■□□□ 1.39
CASC4-204ENST00000557945 ZBTB10Q96DT7 871 aa23.73■■□□□ 1.39
CASC4-204ENST00000557945 TUBE1Q9UJT0 475 aa23.73■■□□□ 1.39
CASC4-204ENST00000557945 CMA1P23946 247 aa23.72■■□□□ 1.39
CASC4-204ENST00000557945 RARRES1P49788 294 aa23.72■■□□□ 1.39
CASC4-204ENST00000557945 TBC1D8BQ0IIM8 1120 aa23.72■■□□□ 1.39
CASC4-204ENST00000557945 TARBP2Q15633 366 aaKnown RBP23.72■■□□□ 1.39
CASC4-204ENST00000557945 PDILTQ8N807 584 aa23.72■■□□□ 1.39
CASC4-204ENST00000557945 TOX2Q96NM4 488 aa23.72■■□□□ 1.39
CASC4-204ENST00000557945 GBP4Q96PP9 640 aa23.72■■□□□ 1.39
CASC4-204ENST00000557945 BHMT2Q9H2M3 363 aa23.72■■□□□ 1.39
CASC4-204ENST00000557945 DBR1Q9UK59 544 aaKnown RBP23.72■■□□□ 1.39
CASC4-204ENST00000557945 KAT6AQ92794 2004 aa23.72■■□□□ 1.39
CASC4-204ENST00000557945 ARHGEF35A5YM69 484 aa23.71■■□□□ 1.39
CASC4-204ENST00000557945 EYA4O95677 639 aa23.71■■□□□ 1.39
CASC4-204ENST00000557945 SSBP05455 408 aaKnown RBP eCLIP23.71■■□□□ 1.39
CASC4-204ENST00000557945 MTHFD1LQ6UB35 978 aa23.71■■□□□ 1.39
CASC4-204ENST00000557945 CCDC73Q6ZRK6 1079 aa23.71■■□□□ 1.39
CASC4-204ENST00000557945 A0A1W2PQ27 194 aa23.7■■□□□ 1.38
CASC4-204ENST00000557945 A0A1W2PQ64 194 aa23.7■■□□□ 1.38
CASC4-204ENST00000557945 A0A1W2PQD8 194 aa23.7■■□□□ 1.38
CASC4-204ENST00000557945 MAGEB2O15479 319 aa23.7■■□□□ 1.38
CASC4-204ENST00000557945 C22orf31O95567 290 aa23.7■■□□□ 1.38
CASC4-204ENST00000557945 CYP2C9P11712 490 aa23.7■■□□□ 1.38
CASC4-204ENST00000557945 STAT6P42226 847 aa23.7■■□□□ 1.38
CASC4-204ENST00000557945 POLGP54098 1239 aaPredicted RBP23.7■■□□□ 1.38
CASC4-204ENST00000557945 ADAM17P78536 824 aa23.7■■□□□ 1.38
CASC4-204ENST00000557945 CLEC17AQ6ZS10 378 aa23.7■■□□□ 1.38
CASC4-204ENST00000557945 KCTD17Q8N5Z5 321 aa23.7■■□□□ 1.38
CASC4-204ENST00000557945 METTL13Q8N6R0 699 aa23.7■■□□□ 1.38
CASC4-204ENST00000557945 FSIP1Q8NA03 581 aa23.7■■□□□ 1.38
CASC4-204ENST00000557945 BMP2KQ9NSY1 1161 aaPredicted RBP23.7■■□□□ 1.38
CASC4-204ENST00000557945 A0A087X0B3 334 aa23.69■■□□□ 1.38
CASC4-204ENST00000557945 A0A1B0GVL5 298 aa23.69■■□□□ 1.38
CASC4-204ENST00000557945 MBLAC1A4D2B0 266 aaPredicted RBP23.69■■□□□ 1.38
CASC4-204ENST00000557945 CD4P01730 458 aa23.69■■□□□ 1.38
CASC4-204ENST00000557945 RUFY4Q6ZNE9 571 aa23.69■■□□□ 1.38
CASC4-204ENST00000557945 SLC7A3Q8WY07 619 aa23.69■■□□□ 1.38
CASC4-204ENST00000557945 MRPS27Q92552 414 aaKnown RBP23.69■■□□□ 1.38
CASC4-204ENST00000557945 DPF3Q92784 378 aa23.69■■□□□ 1.38
CASC4-204ENST00000557945 CEP89Q96ST8 783 aa23.69■■□□□ 1.38
CASC4-204ENST00000557945 SUGCTQ9HAC7 445 aa23.69■■□□□ 1.38
CASC4-204ENST00000557945 KCNH3Q9ULD8 1083 aa23.69■■□□□ 1.38
CASC4-204ENST00000557945 PPME1Q9Y570 386 aa23.69■■□□□ 1.38
CASC4-204ENST00000557945 PCDHA2Q9Y5H9 948 aa23.69■■□□□ 1.38
CASC4-204ENST00000557945 USO1O60763 962 aaKnown RBP23.68■■□□□ 1.38
CASC4-204ENST00000557945 PLA2G4BP0C869 781 aa23.68■■□□□ 1.38
CASC4-204ENST00000557945 PFKFB1P16118 471 aa23.68■■□□□ 1.38
CASC4-204ENST00000557945 RFC5P40937 340 aa23.68■■□□□ 1.38
CASC4-204ENST00000557945 FAAP100Q0VG06 881 aa23.68■■□□□ 1.38
CASC4-204ENST00000557945 PTK7Q13308 1070 aa23.68■■□□□ 1.38
CASC4-204ENST00000557945 DHX8Q14562 1220 aaKnown RBP23.68■■□□□ 1.38
CASC4-204ENST00000557945 EFCAB12Q6NXP0 572 aa23.68■■□□□ 1.38
CASC4-204ENST00000557945 SERINC5Q86VE9 423 aa23.68■■□□□ 1.38
CASC4-204ENST00000557945 TMEM87AQ8NBN3 555 aa23.68■■□□□ 1.38
CASC4-204ENST00000557945 RETREG2Q8NC44 543 aa23.68■■□□□ 1.38
CASC4-204ENST00000557945 RAD54LQ92698 747 aa23.68■■□□□ 1.38
CASC4-204ENST00000557945 DHX58Q96C10 678 aa23.68■■□□□ 1.38
CASC4-204ENST00000557945 CTAGE1Q96RT6 745 aa23.68■■□□□ 1.38
CASC4-204ENST00000557945 FAM49AQ9H0Q0 323 aaPredicted RBP23.68■■□□□ 1.38
CASC4-204ENST00000557945 STK17AQ9UEE5 414 aa23.68■■□□□ 1.38
CASC4-204ENST00000557945 POLR2DO15514 142 aaKnown RBP23.67■■□□□ 1.38
CASC4-204ENST00000557945 PRPF40AO75400 957 aaKnown RBP23.67■■□□□ 1.38
CASC4-204ENST00000557945 CLTBP09497 229 aa23.67■■□□□ 1.38
CASC4-204ENST00000557945 TAF2Q6P1X5 1199 aa23.67■■□□□ 1.38
CASC4-204ENST00000557945 PADI6Q6TGC4 694 aa23.67■■□□□ 1.38
CASC4-204ENST00000557945 EXOC8Q8IYI6 725 aa23.67■■□□□ 1.38
CASC4-204ENST00000557945 C7orf61Q8IZ16 206 aa23.67■■□□□ 1.38
CASC4-204ENST00000557945 LRRC71Q8N4P6 559 aa23.67■■□□□ 1.38
CASC4-204ENST00000557945 LRRC15Q8TF66 581 aa23.67■■□□□ 1.38
CASC4-204ENST00000557945 JPH2Q9BR39 696 aaPredicted RBP23.67■■□□□ 1.38
CASC4-204ENST00000557945 PRDM5Q9NQX1 630 aaPredicted RBP23.67■■□□□ 1.38
CASC4-204ENST00000557945 BLOC1S4Q9NUP1 217 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms