RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 MTMR7Q9Y216 660 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 ZDHHC9Q9Y397 364 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 AFG3L2Q9Y4W6 797 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 FRMPD2Q68DX3 1309 aaPredicted RBP6.9□□□□□ -1.3
FOXN3-218ENST00000557718 hCG_1642624A0A1W2PR95 340 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 PTPDC1A2A3K4 754 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 ADAMTS3O15072 1205 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 FAM13AO94988 1023 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 CELF2O95319 508 aaKnown RBP6.89□□□□□ -1.31
FOXN3-218ENST00000557718 TIAF1O95411 115 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 DLGAP3O95886 979 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 WNT11O96014 354 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 IFNAR1P17181 557 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 GJB2P29033 226 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 SPP2Q13103 211 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 ZYXQ15942 572 aaKnown RBP6.89□□□□□ -1.31
FOXN3-218ENST00000557718 PKN1Q16512 942 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 SLFN13Q68D06 897 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 KCTD1Q719H9 257 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 SPICE1Q8N0Z3 855 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 ASAP3Q8TDY4 903 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 DCAF4Q8WV16 495 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 MTMR8Q96EF0 704 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 DDX11Q96FC9 970 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 LLPHQ9BRT6 129 aaKnown RBP6.89□□□□□ -1.31
FOXN3-218ENST00000557718 KIAA1683Q9H0B3 1180 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 VCPKMTQ9H867 229 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 ZNF408Q9H9D4 720 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 GBA2Q9HCG7 927 aaPredicted RBP6.89□□□□□ -1.31
FOXN3-218ENST00000557718 CYP4F12Q9HCS2 524 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 LATS2Q9NRM7 1088 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 SYNPO2Q9UMS6 1093 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 STK36Q9NRP7 1315 aa6.89□□□□□ -1.31
FOXN3-218ENST00000557718 TRIM75PA6NK02 468 aa6.88□□□□□ -1.31
FOXN3-218ENST00000557718 FZD6O60353 706 aa6.88□□□□□ -1.31
FOXN3-218ENST00000557718 PPP1R11O60927 126 aaPredicted RBP6.88□□□□□ -1.31
FOXN3-218ENST00000557718 PARP1P09874 1014 aaKnown RBP6.88□□□□□ -1.31
FOXN3-218ENST00000557718 CALM1P0DP23 149 aa6.88□□□□□ -1.31
FOXN3-218ENST00000557718 CALM2P0DP24 149 aa6.88□□□□□ -1.31
FOXN3-218ENST00000557718 CALM3P0DP25 149 aa6.88□□□□□ -1.31
FOXN3-218ENST00000557718 ESRRAP11474 423 aaPredicted RBP6.88□□□□□ -1.31
FOXN3-218ENST00000557718 NF2P35240 595 aa6.88□□□□□ -1.31
FOXN3-218ENST00000557718 SLC16A2P36021 539 aa6.88□□□□□ -1.31
FOXN3-218ENST00000557718 BACE1P56817 501 aa6.88□□□□□ -1.31
FOXN3-218ENST00000557718 ASPRV1Q53RT3 343 aa6.88□□□□□ -1.31
FOXN3-218ENST00000557718 FAM83BQ5T0W9 1011 aa6.88□□□□□ -1.31
FOXN3-218ENST00000557718 BTNL9Q6UXG8 535 aa6.88□□□□□ -1.31
FOXN3-218ENST00000557718 ANKRD13AQ8IZ07 590 aa6.88□□□□□ -1.31
FOXN3-218ENST00000557718 CCDC82Q8N4S0 544 aa6.88□□□□□ -1.31
FOXN3-218ENST00000557718 CTCFLQ8NI51 663 aaPredicted RBP6.88□□□□□ -1.31
FOXN3-218ENST00000557718 OPTNQ96CV9 577 aa6.88□□□□□ -1.31
FOXN3-218ENST00000557718 C12orf42Q96LP6 360 aa6.88□□□□□ -1.31
FOXN3-218ENST00000557718 SPZ1Q9BXG8 430 aa6.88□□□□□ -1.31
FOXN3-218ENST00000557718 UBA5Q9GZZ9 404 aa6.88□□□□□ -1.31
FOXN3-218ENST00000557718 RIOX1Q9H6W3 641 aa6.88□□□□□ -1.31
FOXN3-218ENST00000557718 PICK1Q9NRD5 415 aa6.88□□□□□ -1.31
FOXN3-218ENST00000557718 FBXO28Q9NVF7 368 aa6.88□□□□□ -1.31
FOXN3-218ENST00000557718 RBM28Q9NW13 759 aaKnown RBP6.88□□□□□ -1.31
FOXN3-218ENST00000557718 ZHX2Q9Y6X8 837 aa6.88□□□□□ -1.31
FOXN3-218ENST00000557718 A0A0G2JLL6 359 aaPredicted RBP6.87□□□□□ -1.31
FOXN3-218ENST00000557718 KLRF2D3W0D1 207 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 PRPF3O43395 683 aaKnown RBP6.87□□□□□ -1.31
FOXN3-218ENST00000557718 VCAM1P19320 739 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 SYT1P21579 422 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 YY1P25490 414 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 HMGCS2P54868 508 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 FKBP1BP68106 108 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 PPATQ06203 517 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 PPIL2Q13356 520 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 NPY5RQ15761 445 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 EXOSC6Q5RKV6 272 aaKnown RBP6.87□□□□□ -1.31
FOXN3-218ENST00000557718 TREML2Q5T2D2 321 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 OTUD7BQ6GQQ9 843 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 PHLDB3Q6NSJ2 640 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 SYNE3Q6ZMZ3 975 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 ARMC9Q7Z3E5 817 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 PRRT2Q7Z6L0 340 aaPredicted RBP6.87□□□□□ -1.31
FOXN3-218ENST00000557718 ERO1BQ86YB8 467 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 FBXL6Q8N531 539 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 WNK4Q96J92 1243 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 PIGSQ96S52 555 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 SLC26A6Q9BXS9 759 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 RNF26Q9BY78 433 aaPredicted RBP6.87□□□□□ -1.31
FOXN3-218ENST00000557718 JMJD4Q9H9V9 463 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 ZFYVE28Q9HCC9 887 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 ORC3Q9UBD5 711 aaPredicted RBP6.87□□□□□ -1.31
FOXN3-218ENST00000557718 SMC3Q9UQE7 1217 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 MTMR6Q9Y217 621 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.87□□□□□ -1.31
FOXN3-218ENST00000557718 CSADQ9Y600 493 aa6.87□□□□□ -1.31
FOXN3-218ENST00000557718 ZNF236Q9UL36 1845 aa6.86□□□□□ -1.31
FOXN3-218ENST00000557718 UNCXA6NJT0 531 aa6.86□□□□□ -1.31
FOXN3-218ENST00000557718 METTL12A8MUP2 240 aa6.86□□□□□ -1.31
FOXN3-218ENST00000557718 TMEM232C9JQI7 657 aa6.86□□□□□ -1.31
FOXN3-218ENST00000557718 WDR46O15213 610 aaKnown RBP6.86□□□□□ -1.31
FOXN3-218ENST00000557718 TOMM70O94826 608 aa6.86□□□□□ -1.31
FOXN3-218ENST00000557718 F13BP05160 661 aa6.86□□□□□ -1.31
FOXN3-218ENST00000557718 DRD2P14416 443 aa6.86□□□□□ -1.31
FOXN3-218ENST00000557718 SMARCA1P28370 1054 aa6.86□□□□□ -1.31
FOXN3-218ENST00000557718 KIF5BP33176 963 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms