RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 SERINC5Q86VE9 423 aa7.95□□□□□ -1.14
SPTLC2-206ENST00000557566 ZNF444Q8N0Y2 327 aaPredicted RBP7.95□□□□□ -1.14
SPTLC2-206ENST00000557566 STK11IPQ8N1F8 1099 aa7.95□□□□□ -1.14
SPTLC2-206ENST00000557566 PLPP7Q8NBV4 271 aa7.95□□□□□ -1.14
SPTLC2-206ENST00000557566 FLCNQ8NFG4 579 aa7.95□□□□□ -1.14
SPTLC2-206ENST00000557566 DNERQ8NFT8 737 aa7.95□□□□□ -1.14
SPTLC2-206ENST00000557566 HPS1Q92902 700 aa7.95□□□□□ -1.14
SPTLC2-206ENST00000557566 GMCL1Q96IK5 515 aa7.95□□□□□ -1.14
SPTLC2-206ENST00000557566 CHAMP1Q96JM3 812 aa7.95□□□□□ -1.14
SPTLC2-206ENST00000557566 TBC1D32Q96NH3 1257 aa7.95□□□□□ -1.14
SPTLC2-206ENST00000557566 CDK15Q96Q40 435 aa7.95□□□□□ -1.14
SPTLC2-206ENST00000557566 KCTD15Q96SI1 283 aaPredicted RBP7.95□□□□□ -1.14
SPTLC2-206ENST00000557566 DNAJC2Q99543 621 aaKnown RBP7.95□□□□□ -1.14
SPTLC2-206ENST00000557566 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.95□□□□□ -1.14
SPTLC2-206ENST00000557566 RC3H2Q9HBD1 1191 aaKnown RBP7.95□□□□□ -1.14
SPTLC2-206ENST00000557566 ZNF287Q9HBT7 754 aa7.95□□□□□ -1.14
SPTLC2-206ENST00000557566 PRR12Q9ULL5 1215 aa7.95□□□□□ -1.14
SPTLC2-206ENST00000557566 PLXNA4Q9HCM2 1894 aa7.95□□□□□ -1.14
SPTLC2-206ENST00000557566 TTC3P53804 2025 aa7.95□□□□□ -1.14
SPTLC2-206ENST00000557566 SETXQ7Z333 2677 aaKnown RBP7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 GOLGA6L3A6NEY3 463 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 HAS3O00219 553 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 NFIBO00712 420 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 CAND2O75155 1236 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 ITGB1P05556 798 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 CT47B1P0C2W7 299 aaPredicted RBP7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 AOC1P19801 751 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 MCCP23508 829 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 DNAJB1P25685 340 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 ADD2P35612 726 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 PDE4CQ08493 712 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 SBK1Q52WX2 424 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 CWF19L1Q69YN2 538 aaKnown RBP7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 CCDC62Q6P9F0 684 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 ZC3H14Q6PJT7 736 aaKnown RBP7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 SLC30A10Q6XR72 485 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 RNF207Q6ZRF8 634 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 KCTD1Q719H9 257 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 DTWD2Q8NBA8 298 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 SPPL3Q8TCT6 385 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 ATP8B4Q8TF62 1192 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 POF1BQ8WVV4 589 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 ARHGAP45Q92619 1136 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 CDCA3Q99618 268 aaPredicted RBP7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 RTP3Q9BQQ7 232 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 TRAIPQ9BWF2 469 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 VRTNQ9H8Y1 702 aa7.94□□□□□ -1.14
SPTLC2-206ENST00000557566 MINDY4BA8MYZ0 360 aa7.93□□□□□ -1.14
SPTLC2-206ENST00000557566 BCAR3O75815 825 aa7.93□□□□□ -1.14
SPTLC2-206ENST00000557566 CTSHP09668 335 aa7.93□□□□□ -1.14
SPTLC2-206ENST00000557566 ZNF286BP0CG31 522 aa7.93□□□□□ -1.14
SPTLC2-206ENST00000557566 WDR4P57081 412 aaKnown RBP7.93□□□□□ -1.14
SPTLC2-206ENST00000557566 ATP8B2P98198 1209 aa7.93□□□□□ -1.14
SPTLC2-206ENST00000557566 NR5A1Q13285 461 aa7.93□□□□□ -1.14
SPTLC2-206ENST00000557566 ELOAQ14241 798 aaKnown RBP7.93□□□□□ -1.14
SPTLC2-206ENST00000557566 LY6KQ17RY6 165 aa7.93□□□□□ -1.14
SPTLC2-206ENST00000557566 RCSD1Q6JBY9 416 aa7.93□□□□□ -1.14
SPTLC2-206ENST00000557566 SEPT14Q6ZU15 432 aa7.93□□□□□ -1.14
SPTLC2-206ENST00000557566 KLHL23Q8NBE8 558 aa7.93□□□□□ -1.14
SPTLC2-206ENST00000557566 MICAL1Q8TDZ2 1067 aa7.93□□□□□ -1.14
SPTLC2-206ENST00000557566 ATP6V0A1Q93050 837 aa7.93□□□□□ -1.14
SPTLC2-206ENST00000557566 CHMP4CQ96CF2 233 aa7.93□□□□□ -1.14
SPTLC2-206ENST00000557566 ZNF689Q96CS4 500 aaPredicted RBP7.93□□□□□ -1.14
SPTLC2-206ENST00000557566 CHMP5Q9NZZ3 219 aa7.93□□□□□ -1.14
SPTLC2-206ENST00000557566 RALYQ9UKM9 306 aaKnown RBP7.93□□□□□ -1.14
SPTLC2-206ENST00000557566 R4GN57 208 aa7.93□□□□□ -1.14
SPTLC2-206ENST00000557566 PLIN4Q96Q06 1357 aa7.93□□□□□ -1.14
SPTLC2-206ENST00000557566 GPR179Q6PRD1 2367 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 KAT6AQ92794 2004 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 C17orf102A2RUQ5 167 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 C2CD4DB7Z1M9 353 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 PER2O15055 1255 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 AXIN1O15169 862 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 EIF5BO60841 1220 aaKnown RBP7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 TSPY3P0CV98 308 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 TSPY8P0CW00 308 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 PDIA4P13667 645 aaKnown RBP7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 TECP42680 631 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 ATXN1P54253 815 aaKnown RBP7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 RPS6P62753 249 aaKnown RBP7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 RBM10P98175 930 aaKnown RBP7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 UBE3CQ15386 1083 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 DUSP6Q16828 381 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 ANKRD54Q6NXT1 300 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 ERC1Q8IUD2 1116 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 CCDC116Q8IYX3 515 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 DCLK2Q8N568 766 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 VN1R2Q8NFZ6 395 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 PPTC7Q8NI37 304 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 NECTIN4Q96NY8 510 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 S1PR5Q9H228 398 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 RANBP17Q9H2T7 1088 aaKnown RBP7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 SMOC2Q9H3U7 446 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 PNMA2Q9UL42 364 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 USTQ9Y2C2 406 aa7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 MRPL42Q9Y6G3 142 aaKnown RBP7.92□□□□□ -1.14
SPTLC2-206ENST00000557566 PI15O43692 258 aa7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 PRDM1O75626 825 aa7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 DGKIO75912 1065 aa7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 IGHDP01880 384 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms