RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 NONOQ15233 471 aaKnown RBP eCLIP11□□□□□ -0.65
NEDD1-211ENST00000557454 IL31Q6EBC2 164 aa11□□□□□ -0.65
NEDD1-211ENST00000557454 TSSK4Q6SA08 328 aa11□□□□□ -0.65
NEDD1-211ENST00000557454 GPR149Q86SP6 731 aa11□□□□□ -0.65
NEDD1-211ENST00000557454 ERC1Q8IUD2 1116 aa11□□□□□ -0.65
NEDD1-211ENST00000557454 SLC44A3Q8N4M1 653 aa11□□□□□ -0.65
NEDD1-211ENST00000557454 DNAJB3Q8WWF6 145 aa11□□□□□ -0.65
NEDD1-211ENST00000557454 NELL1Q92832 810 aa11□□□□□ -0.65
NEDD1-211ENST00000557454 CLUAP1Q96AJ1 413 aa11□□□□□ -0.65
NEDD1-211ENST00000557454 BCO2Q9BYV7 579 aa11□□□□□ -0.65
NEDD1-211ENST00000557454 TMX1Q9H3N1 280 aa11□□□□□ -0.65
NEDD1-211ENST00000557454 PXMP2Q9NR77 195 aa11□□□□□ -0.65
NEDD1-211ENST00000557454 SEMA4GQ9NTN9 838 aa11□□□□□ -0.65
NEDD1-211ENST00000557454 PADI3Q9ULW8 664 aa11□□□□□ -0.65
NEDD1-211ENST00000557454 PCDHB7Q9Y5E2 793 aa11□□□□□ -0.65
NEDD1-211ENST00000557454 TSPY2A6NKD2 308 aa10.99□□□□□ -0.65
NEDD1-211ENST00000557454 MYCLP12524 364 aaPredicted RBP10.99□□□□□ -0.65
NEDD1-211ENST00000557454 PAK2Q13177 524 aa10.99□□□□□ -0.65
NEDD1-211ENST00000557454 PTPN14Q15678 1187 aa10.99□□□□□ -0.65
NEDD1-211ENST00000557454 UTP14CQ5TAP6 766 aaKnown RBP10.99□□□□□ -0.65
NEDD1-211ENST00000557454 KCNV1Q6PIU1 500 aa10.99□□□□□ -0.65
NEDD1-211ENST00000557454 KCNT2Q6UVM3 1135 aa10.99□□□□□ -0.65
NEDD1-211ENST00000557454 CABP7Q86V35 215 aa10.99□□□□□ -0.65
NEDD1-211ENST00000557454 TMEM121BQ9BXQ6 578 aaPredicted RBP10.99□□□□□ -0.65
NEDD1-211ENST00000557454 USP26Q9BXU7 913 aa10.99□□□□□ -0.65
NEDD1-211ENST00000557454 ZNF215Q9UL58 517 aaPredicted RBP10.99□□□□□ -0.65
NEDD1-211ENST00000557454 RAB23Q9ULC3 237 aa10.99□□□□□ -0.65
NEDD1-211ENST00000557454 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.98□□□□□ -0.65
NEDD1-211ENST00000557454 MGEA5O60502 916 aa10.98□□□□□ -0.65
NEDD1-211ENST00000557454 LRP3O75074 770 aa10.98□□□□□ -0.65
NEDD1-211ENST00000557454 APPP05067 770 aa10.98□□□□□ -0.65
NEDD1-211ENST00000557454 RETP07949 1114 aa10.98□□□□□ -0.65
NEDD1-211ENST00000557454 FGFR1P11362 822 aa10.98□□□□□ -0.65
NEDD1-211ENST00000557454 GBP2P32456 591 aaPredicted RBP10.98□□□□□ -0.65
NEDD1-211ENST00000557454 PPM1AP35813 382 aa10.98□□□□□ -0.65
NEDD1-211ENST00000557454 RBM25P49756 843 aaKnown RBP10.98□□□□□ -0.65
NEDD1-211ENST00000557454 KRT17Q04695 432 aa10.98□□□□□ -0.65
NEDD1-211ENST00000557454 LETM2Q2VYF4 491 aa10.98□□□□□ -0.65
NEDD1-211ENST00000557454 SOWAHCQ53LP3 525 aaPredicted RBP10.98□□□□□ -0.65
NEDD1-211ENST00000557454 LAIR1Q6GTX8 287 aa10.98□□□□□ -0.65
NEDD1-211ENST00000557454 ZSCAN25Q6NSZ9 544 aa10.98□□□□□ -0.65
NEDD1-211ENST00000557454 RHPN1Q8TCX5 695 aa10.98□□□□□ -0.65
NEDD1-211ENST00000557454 AUTS2Q8WXX7 1259 aa10.98□□□□□ -0.65
NEDD1-211ENST00000557454 OSBP2Q969R2 916 aa10.98□□□□□ -0.65
NEDD1-211ENST00000557454 ZBTB10Q96DT7 871 aa10.98□□□□□ -0.65
NEDD1-211ENST00000557454 ZFP91Q96JP5 570 aaPredicted RBP10.98□□□□□ -0.65
NEDD1-211ENST00000557454 FAM49AQ9H0Q0 323 aaPredicted RBP10.98□□□□□ -0.65
NEDD1-211ENST00000557454 SFXN1Q9H9B4 322 aa10.98□□□□□ -0.65
NEDD1-211ENST00000557454 TUBE1Q9UJT0 475 aa10.98□□□□□ -0.65
NEDD1-211ENST00000557454 TELO2Q9Y4R8 837 aa10.98□□□□□ -0.65
NEDD1-211ENST00000557454 COL4A3Q01955 1670 aa10.98□□□□□ -0.65
NEDD1-211ENST00000557454 TMEM8BA6NDV4 472 aa10.97□□□□□ -0.65
NEDD1-211ENST00000557454 GPAA1O43292 621 aa10.97□□□□□ -0.65
NEDD1-211ENST00000557454 IFIT2P09913 472 aaKnown RBP10.97□□□□□ -0.65
NEDD1-211ENST00000557454 CT47B1P0C2W7 299 aaPredicted RBP10.97□□□□□ -0.65
NEDD1-211ENST00000557454 PDHBP11177 359 aa10.97□□□□□ -0.65
NEDD1-211ENST00000557454 STARD6P59095 220 aa10.97□□□□□ -0.65
NEDD1-211ENST00000557454 TMEM62Q0P6H9 643 aa10.97□□□□□ -0.65
NEDD1-211ENST00000557454 PPFIA1Q13136 1202 aa10.97□□□□□ -0.65
NEDD1-211ENST00000557454 CSRP2Q16527 193 aa10.97□□□□□ -0.65
NEDD1-211ENST00000557454 TMEM266Q2M3C6 531 aa10.97□□□□□ -0.65
NEDD1-211ENST00000557454 FAM9BQ8IZU0 186 aa10.97□□□□□ -0.65
NEDD1-211ENST00000557454 TMEM57Q8N5G2 664 aa10.97□□□□□ -0.65
NEDD1-211ENST00000557454 IL31RAQ8NI17 732 aa10.97□□□□□ -0.65
NEDD1-211ENST00000557454 SLC22A17Q8WUG5 538 aa10.97□□□□□ -0.65
NEDD1-211ENST00000557454 GLG1Q92896 1179 aa10.97□□□□□ -0.65
NEDD1-211ENST00000557454 MAP4K1Q92918 833 aa10.97□□□□□ -0.65
NEDD1-211ENST00000557454 ZNF558Q96NG5 402 aa10.97□□□□□ -0.65
NEDD1-211ENST00000557454 PDCD2LQ9BRP1 358 aa10.97□□□□□ -0.65
NEDD1-211ENST00000557454 MTF2Q9Y483 593 aaPredicted RBP10.97□□□□□ -0.65
NEDD1-211ENST00000557454 IGSF10Q6WRI0 2623 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 FNDC1Q4ZHG4 1894 aaPredicted RBP10.96□□□□□ -0.65
NEDD1-211ENST00000557454 ABCB11O95342 1321 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 IGSF9BQ9UPX0 1349 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 KANSL1LA0AUZ9 987 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 CXCL14O95715 111 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 SLC3A2P08195 630 aaKnown RBP10.96□□□□□ -0.65
NEDD1-211ENST00000557454 HSPD1P10809 573 aaKnown RBP10.96□□□□□ -0.65
NEDD1-211ENST00000557454 SPINK2P20155 84 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 NOVP48745 357 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 PPARAQ07869 468 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 ZNF543Q08ER8 600 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 UBXN2BQ14CS0 331 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 GRIK4Q16099 956 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 PRR23BQ6ZRT6 265 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 LRRC55Q6ZSA7 311 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 MCF2L2Q86YR7 1114 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 IFNL3Q8IZI9 196 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 CLASRPQ8N2M8 674 aaKnown RBP10.96□□□□□ -0.65
NEDD1-211ENST00000557454 TMEM87AQ8NBN3 555 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 ST13P5Q8NFI4 369 aaPredicted RBP10.96□□□□□ -0.65
NEDD1-211ENST00000557454 ZCCHC14Q8WYQ9 949 aaKnown RBP10.96□□□□□ -0.65
NEDD1-211ENST00000557454 MYADMQ96S97 322 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 CPVLQ9H3G5 476 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 SPG21Q9NZD8 308 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 EPS15L1Q9UBC2 864 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.96□□□□□ -0.65
NEDD1-211ENST00000557454 TRPV2Q9Y5S1 764 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 SQORQ9Y6N5 450 aa10.96□□□□□ -0.65
NEDD1-211ENST00000557454 PATJQ8NI35 1801 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms