RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 GRXCR1A8MXD5 290 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 GIPC1O14908 333 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 GSC2O15499 205 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 PGK1P00558 417 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 SLFN14P0C7P3 912 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 FCER1AP12319 257 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 LIG1P18858 919 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 MCCP23508 829 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 EIF4BP23588 611 aaKnown RBP5.87□□□□□ -1.47
ATXN3-247ENST00000557311 MAP4P27816 1152 aaKnown RBP5.87□□□□□ -1.47
ATXN3-247ENST00000557311 ABCB5Q2M3G0 1257 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 CERKLQ49MI3 558 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-247ENST00000557311 TMEM31Q5JXX7 168 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 PAOXQ6QHF9 649 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 TTC6Q86TZ1 520 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 SULF2Q8IWU5 870 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 TMEM199Q8N511 208 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 FBXL6Q8N531 539 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 MB21D1Q8N884 522 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 ACER1Q8TDN7 264 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 FBLIM1Q8WUP2 373 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 SSH1Q8WYL5 1049 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 HERVK_113Q902F9 699 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 ANP32BQ92688 251 aaKnown RBP5.87□□□□□ -1.47
ATXN3-247ENST00000557311 MAML3Q96JK9 1138 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 TRIM56Q9BRZ2 755 aaKnown RBP5.87□□□□□ -1.47
ATXN3-247ENST00000557311 OSBPL7Q9BZF2 842 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 EPHX3Q9H6B9 360 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 SLC28A3Q9HAS3 691 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 PIDD1Q9HB75 910 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 STARD7Q9NQZ5 370 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 SAP30BPQ9UHR5 308 aaKnown RBP5.87□□□□□ -1.47
ATXN3-247ENST00000557311 SERPINB13Q9UIV8 391 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 DIS3Q9Y2L1 958 aaKnown RBP5.87□□□□□ -1.47
ATXN3-247ENST00000557311 SAMM50Q9Y512 469 aa5.87□□□□□ -1.47
ATXN3-247ENST00000557311 ELP1O95163 1332 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 MROH7Q68CQ1 1323 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 FAM95CA0A1B0GW59 222 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 ERC2O15083 957 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 SRGAP3O43295 1099 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 PRPF40AO75400 957 aaKnown RBP5.86□□□□□ -1.47
ATXN3-247ENST00000557311 SLC25A27O95847 323 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 FGBP02675 491 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 CTSBP07858 339 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 HSP90AA1P07900 732 aaKnown RBP5.86□□□□□ -1.47
ATXN3-247ENST00000557311 USP17L7P0C7H9 530 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 ADH5P11766 374 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 AKR1A1P14550 325 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 MCAMP43121 646 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 ASPAP45381 313 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 CDK7P50613 346 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 ACLYP53396 1101 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 PSRC1Q6PGN9 363 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-247ENST00000557311 ZNF365Q70YC5 407 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 CERS3Q8IU89 383 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 CLEC10AQ8IUN9 316 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 KLHDC9Q8NEP7 349 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 GIMAP7Q8NHV1 300 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 NECAB3Q96P71 396 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-247ENST00000557311 DUSP9Q99956 384 aaKnown RBP5.86□□□□□ -1.47
ATXN3-247ENST00000557311 TINF2Q9BSI4 451 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 EMILIN2Q9BXX0 1053 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 CEP44Q9C0F1 390 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 MTIF3Q9H2K0 278 aaKnown RBP5.86□□□□□ -1.47
ATXN3-247ENST00000557311 C12orf49Q9H741 205 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 SUGCTQ9HAC7 445 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 MRS2Q9HD23 443 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 SSU72Q9NP77 194 aaKnown RBP5.86□□□□□ -1.47
ATXN3-247ENST00000557311 TBX21Q9UL17 535 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 HIF3AQ9Y2N7 669 aa5.86□□□□□ -1.47
ATXN3-247ENST00000557311 A0A1B0GUL6 1792 aa5.85□□□□□ -1.47
ATXN3-247ENST00000557311 ARVCFO00192 962 aa5.85□□□□□ -1.47
ATXN3-247ENST00000557311 RNGTTO60942 597 aaKnown RBP5.85□□□□□ -1.47
ATXN3-247ENST00000557311 ADAMTS4O75173 837 aa5.85□□□□□ -1.47
ATXN3-247ENST00000557311 IGLV1-40P01703 118 aa5.85□□□□□ -1.47
ATXN3-247ENST00000557311 GSTP1P09211 210 aaKnown RBP5.85□□□□□ -1.47
ATXN3-247ENST00000557311 ZNF865P0CJ78 1059 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-247ENST00000557311 ACRP10323 421 aa5.85□□□□□ -1.47
ATXN3-247ENST00000557311 CSF2RAP15509 400 aa5.85□□□□□ -1.47
ATXN3-247ENST00000557311 POU3F3P20264 500 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-247ENST00000557311 DYNLL1P63167 89 aaKnown RBP5.85□□□□□ -1.47
ATXN3-247ENST00000557311 SETQ01105 290 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-247ENST00000557311 PSMD2Q13200 908 aa5.85□□□□□ -1.47
ATXN3-247ENST00000557311 G3BP1Q13283 466 aaKnown RBP eCLIP5.85□□□□□ -1.47
ATXN3-247ENST00000557311 PLS1Q14651 629 aa5.85□□□□□ -1.47
ATXN3-247ENST00000557311 KCTD2Q14681 263 aa5.85□□□□□ -1.47
ATXN3-247ENST00000557311 KCNA10Q16322 511 aa5.85□□□□□ -1.47
ATXN3-247ENST00000557311 ZNF792Q3KQV3 632 aa5.85□□□□□ -1.47
ATXN3-247ENST00000557311 ALDH1L2Q3SY69 923 aa5.85□□□□□ -1.47
ATXN3-247ENST00000557311 CCDC158Q5M9N0 1113 aa5.85□□□□□ -1.47
ATXN3-247ENST00000557311 ADGRA1Q86SQ6 560 aa5.85□□□□□ -1.47
ATXN3-247ENST00000557311 PCSK9Q8NBP7 692 aaKnown RBP5.85□□□□□ -1.47
ATXN3-247ENST00000557311 MFSD14AQ96MC6 490 aa5.85□□□□□ -1.47
ATXN3-247ENST00000557311 GLT1D1Q96MS3 346 aa5.85□□□□□ -1.47
ATXN3-247ENST00000557311 FRMD6Q96NE9 622 aa5.85□□□□□ -1.47
ATXN3-247ENST00000557311 MMP19Q99542 508 aa5.85□□□□□ -1.47
ATXN3-247ENST00000557311 FAM83CQ9BQN1 747 aa5.85□□□□□ -1.47
ATXN3-247ENST00000557311 NKX2-4Q9H2Z4 354 aa5.85□□□□□ -1.47
ATXN3-247ENST00000557311 CCDC86Q9H6F5 360 aaKnown RBP5.85□□□□□ -1.47
ATXN3-247ENST00000557311 IL23AQ9NPF7 189 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms