RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 TTLL1O95922 423 aa12.42□□□□□ -0.42
SRP54-213ENST00000556994 PLCG2P16885 1265 aa12.42□□□□□ -0.42
SRP54-213ENST00000556994 EPHA7Q15375 998 aa12.42□□□□□ -0.42
SRP54-213ENST00000556994 FAM98CQ17RN3 349 aaKnown RBP12.42□□□□□ -0.42
SRP54-213ENST00000556994 RUFY4Q6ZNE9 571 aa12.42□□□□□ -0.42
SRP54-213ENST00000556994 TMC3Q7Z5M5 1100 aa12.42□□□□□ -0.42
SRP54-213ENST00000556994 ZC3H3Q8IXZ2 948 aaKnown RBP12.42□□□□□ -0.42
SRP54-213ENST00000556994 CCDC114Q96M63 670 aa12.42□□□□□ -0.42
SRP54-213ENST00000556994 SLC40A1Q9NP59 571 aa12.42□□□□□ -0.42
SRP54-213ENST00000556994 SIX2Q9NPC8 291 aa12.42□□□□□ -0.42
SRP54-213ENST00000556994 DDX4Q9NQI0 724 aaKnown RBP12.42□□□□□ -0.42
SRP54-213ENST00000556994 GEMIN8Q9NWZ8 242 aaKnown RBP12.42□□□□□ -0.42
SRP54-213ENST00000556994 GCNT4Q9P109 453 aa12.42□□□□□ -0.42
SRP54-213ENST00000556994 BZW2Q9Y6E2 419 aaKnown RBP12.42□□□□□ -0.42
SRP54-213ENST00000556994 TNRC6CQ9HCJ0 1690 aaKnown RBP12.41□□□□□ -0.42
SRP54-213ENST00000556994 FGGP02679 453 aa12.41□□□□□ -0.42
SRP54-213ENST00000556994 ABCB4P21439 1286 aa12.41□□□□□ -0.42
SRP54-213ENST00000556994 HOXA7P31268 230 aaPredicted RBP12.41□□□□□ -0.42
SRP54-213ENST00000556994 GALCP54803 685 aa12.41□□□□□ -0.42
SRP54-213ENST00000556994 SNAP25P60880 206 aa12.41□□□□□ -0.42
SRP54-213ENST00000556994 CYP4A11Q02928 519 aa12.41□□□□□ -0.42
SRP54-213ENST00000556994 PRR16Q569H4 304 aa12.41□□□□□ -0.42
SRP54-213ENST00000556994 PPP4R3CPQ6ZMV5 832 aa12.41□□□□□ -0.42
SRP54-213ENST00000556994 FRMD5Q7Z6J6 570 aa12.41□□□□□ -0.42
SRP54-213ENST00000556994 NT5DC3Q86UY8 548 aa12.41□□□□□ -0.42
SRP54-213ENST00000556994 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.41□□□□□ -0.42
SRP54-213ENST00000556994 SEC16BQ96JE7 1060 aa12.41□□□□□ -0.42
SRP54-213ENST00000556994 CALR3Q96L12 384 aaKnown RBP12.41□□□□□ -0.42
SRP54-213ENST00000556994 MYCBPQ99417 103 aaPredicted RBP12.41□□□□□ -0.42
SRP54-213ENST00000556994 ATF5Q9Y2D1 282 aaPredicted RBP12.41□□□□□ -0.42
SRP54-213ENST00000556994 STXBP5LQ9Y2K9 1186 aa12.41□□□□□ -0.42
SRP54-213ENST00000556994 DAGLAQ9Y4D2 1042 aa12.41□□□□□ -0.42
SRP54-213ENST00000556994 ARFGEF1Q9Y6D6 1849 aa12.41□□□□□ -0.42
SRP54-213ENST00000556994 AHDC1Q5TGY3 1603 aaPredicted RBP12.4□□□□□ -0.42
SRP54-213ENST00000556994 FRMD3A2A2Y4 597 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 BHMG1C9JSJ3 638 aaPredicted RBP12.4□□□□□ -0.42
SRP54-213ENST00000556994 GCFC2P16383 781 aaKnown RBP12.4□□□□□ -0.42
SRP54-213ENST00000556994 BIRC3Q13489 604 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 GLYCTKQ8IVS8 523 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 CCDC26Q8TAB7 109 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 KCNMB3Q9NPA1 279 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 PPP1R9AQ9ULJ8 1098 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 TRAF3IP3Q9Y228 551 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 SPATA31A5Q5VU36 1347 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 SPATA31A7Q8IWB4 1347 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 IGKV6D-41A0A0C4DH26 115 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 CCDC188H7C350 402 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 TAL1P17542 331 aaPredicted RBP12.4□□□□□ -0.42
SRP54-213ENST00000556994 POLD1P28340 1107 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 MAP2K2P36507 400 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 PRKCIP41743 596 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 SMTNP53814 917 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 GABPAQ06546 454 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 IFFO1Q0D2I5 559 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 ZNF211Q13398 564 aaPredicted RBP12.4□□□□□ -0.42
SRP54-213ENST00000556994 BYSLQ13895 437 aaKnown RBP12.4□□□□□ -0.42
SRP54-213ENST00000556994 SHROOM1Q2M3G4 852 aaPredicted RBP12.4□□□□□ -0.42
SRP54-213ENST00000556994 FAM182BQ5T319 152 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 PPP1R18Q6NYC8 613 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 SLC30A10Q6XR72 485 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 SLFN11Q7Z7L1 901 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 RASGEF1CQ8N431 466 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 EIF1ADQ8N9N8 165 aaKnown RBP12.4□□□□□ -0.42
SRP54-213ENST00000556994 LNX1Q8TBB1 728 aaPredicted RBP12.4□□□□□ -0.42
SRP54-213ENST00000556994 ZKSCAN4Q969J2 545 aaPredicted RBP12.4□□□□□ -0.42
SRP54-213ENST00000556994 P2RX7Q99572 595 aaKnown RBP12.4□□□□□ -0.42
SRP54-213ENST00000556994 ANO3Q9BYT9 981 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 GOPCQ9HD26 462 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 SUCLA2Q9P2R7 463 aaPredicted RBP12.4□□□□□ -0.42
SRP54-213ENST00000556994 UTP11Q9Y3A2 253 aaKnown RBP12.4□□□□□ -0.42
SRP54-213ENST00000556994 PCDHA1Q9Y5I3 950 aa12.4□□□□□ -0.42
SRP54-213ENST00000556994 ATAD5Q96QE3 1844 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 F8VZ95 297 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 EVI5O60447 810 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 BUB1BO60566 1050 aaPredicted RBP12.39□□□□□ -0.43
SRP54-213ENST00000556994 CAND2O75155 1236 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 RASSF9O75901 435 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 GCNT3O95395 438 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 NR3C1P04150 777 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 SHBGP04278 402 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 JAM2P57087 298 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 GTF2IP78347 998 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 MTMR3Q13615 1198 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 QRICH1Q2TAL8 776 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 CPLX4Q7Z7G2 160 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 KSR1Q8IVT5 923 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 SLC35G2Q8TBE7 412 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 LMBR1Q8WVP7 490 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 GLG1Q92896 1179 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 SLC35C1Q96A29 364 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 AMFRQ9UKV5 643 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 PNMA2Q9UL42 364 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 DNM3Q9UQ16 869 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 ASTN1O14525 1302 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 IGSF9BQ9UPX0 1349 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 SMIM23A6NLE4 172 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 SPATA31C1P0DKV0 1188 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 IL1R1P14778 569 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 GSCP56915 257 aaPredicted RBP12.39□□□□□ -0.43
SRP54-213ENST00000556994 DDR1Q08345 913 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms