RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 DNAJC10Q8IXB1 793 aa5.37□□□□□ -1.55
SRP54-212ENST00000556992 RILPL2Q969X0 211 aa5.37□□□□□ -1.55
SRP54-212ENST00000556992 KAZALD1Q96I82 304 aa5.37□□□□□ -1.55
SRP54-212ENST00000556992 NOX5Q96PH1 765 aa5.37□□□□□ -1.55
SRP54-212ENST00000556992 IL1RAPL2Q9NP60 686 aa5.37□□□□□ -1.55
SRP54-212ENST00000556992 SUCOQ9UBS9 1254 aaKnown RBP5.37□□□□□ -1.55
SRP54-212ENST00000556992 FBLN5Q9UBX5 448 aa5.37□□□□□ -1.55
SRP54-212ENST00000556992 SALL3Q9BXA9 1300 aa5.37□□□□□ -1.55
SRP54-212ENST00000556992 USP42Q9H9J4 1324 aaKnown RBP5.37□□□□□ -1.55
SRP54-212ENST00000556992 COL15A1P39059 1388 aa5.37□□□□□ -1.55
SRP54-212ENST00000556992 MARF1Q9Y4F3 1742 aaKnown RBP5.37□□□□□ -1.55
SRP54-212ENST00000556992 MEIS3P2A8K0S8 358 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 HIP1O00291 1037 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 FGF10O15520 208 aaPredicted RBP5.36□□□□□ -1.55
SRP54-212ENST00000556992 ASGR2P07307 311 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 CD3EP07766 207 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 HSP90B1P14625 803 aaKnown RBP5.36□□□□□ -1.55
SRP54-212ENST00000556992 MCCP23508 829 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 CHMLP26374 656 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 IL6STP40189 918 aaPredicted RBP5.36□□□□□ -1.55
SRP54-212ENST00000556992 PIP4K2AP48426 406 aaPredicted RBP5.36□□□□□ -1.55
SRP54-212ENST00000556992 CASP7P55210 303 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 ZNF445P59923 1031 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 RABEP1Q15276 862 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 ZNF827Q17R98 1081 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 AXDND1Q5T1B0 1012 aaPredicted RBP5.36□□□□□ -1.55
SRP54-212ENST00000556992 ZFYVE27Q5T4F4 411 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 CWF19L1Q69YN2 538 aaKnown RBP5.36□□□□□ -1.55
SRP54-212ENST00000556992 LMBR1LQ6UX01 489 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 AACSQ86V21 672 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 HSCBQ8IWL3 235 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 CNTROBQ8N137 903 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 RUFY2Q8WXA3 655 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 NKD1Q969G9 470 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 EVI5LQ96CN4 794 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 FCRL3Q96P31 734 aaPredicted RBP5.36□□□□□ -1.55
SRP54-212ENST00000556992 SYT3Q9BQG1 590 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 ISCA1Q9BUE6 129 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 KRTAP9-8Q9BYQ0 159 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 PDLIM7Q9NR12 457 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 MRC1P22897 1456 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 LMO7Q8WWI1 1683 aa5.36□□□□□ -1.55
SRP54-212ENST00000556992 LRRC37A3O60309 1634 aa5.35□□□□□ -1.55
SRP54-212ENST00000556992 DISP2A7MBM2 1401 aa5.35□□□□□ -1.55
SRP54-212ENST00000556992 BCL9O00512 1426 aa5.35□□□□□ -1.55
SRP54-212ENST00000556992 AKAP8O43823 692 aaKnown RBP5.35□□□□□ -1.55
SRP54-212ENST00000556992 CIAO1O76071 339 aa5.35□□□□□ -1.55
SRP54-212ENST00000556992 PCCAP05165 728 aaPredicted RBP5.35□□□□□ -1.55
SRP54-212ENST00000556992 PMLP29590 882 aa5.35□□□□□ -1.55
SRP54-212ENST00000556992 IL15P40933 162 aaPredicted RBP5.35□□□□□ -1.55
SRP54-212ENST00000556992 RFX5P48382 616 aaPredicted RBP5.35□□□□□ -1.55
SRP54-212ENST00000556992 ZNF165P49910 485 aa5.35□□□□□ -1.55
SRP54-212ENST00000556992 ANAPC15P60006 121 aa5.35□□□□□ -1.55
SRP54-212ENST00000556992 CAP1Q01518 475 aa5.35□□□□□ -1.55
SRP54-212ENST00000556992 ZYXQ15942 572 aaKnown RBP5.35□□□□□ -1.55
SRP54-212ENST00000556992 EPHA10Q5JZY3 1008 aa5.35□□□□□ -1.55
SRP54-212ENST00000556992 NOL9Q5SY16 702 aaKnown RBP5.35□□□□□ -1.55
SRP54-212ENST00000556992 USP48Q86UV5 1035 aa5.35□□□□□ -1.55
SRP54-212ENST00000556992 CARFQ8N187 725 aa5.35□□□□□ -1.55
SRP54-212ENST00000556992 ZBTB38Q8NAP3 1195 aaPredicted RBP5.35□□□□□ -1.55
SRP54-212ENST00000556992 ALG3Q92685 438 aa5.35□□□□□ -1.55
SRP54-212ENST00000556992 ZDHHC15Q96MV8 337 aa5.35□□□□□ -1.55
SRP54-212ENST00000556992 GPR108Q9NPR9 543 aa5.35□□□□□ -1.55
SRP54-212ENST00000556992 PA2G4Q9UQ80 394 aaKnown RBP5.35□□□□□ -1.55
SRP54-212ENST00000556992 AHDC1Q5TGY3 1603 aaPredicted RBP5.34□□□□□ -1.55
SRP54-212ENST00000556992 BCL9LQ86UU0 1499 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 TNS2Q63HR2 1409 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 MAP3K15Q6ZN16 1313 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 EYA2O00167 538 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 NOBOXO60393 691 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 CSF1RP07333 972 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 ATP5JP18859 108 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 HMGB2P26583 209 aaKnown RBP5.34□□□□□ -1.55
SRP54-212ENST00000556992 MAGEA10P43363 369 aaPredicted RBP5.34□□□□□ -1.55
SRP54-212ENST00000556992 MCM2P49736 904 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 ADAM17P78536 824 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 TFCP2Q12800 502 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 CCDC57Q2TAC2 916 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 REXO1Q8N1G1 1221 aaKnown RBP5.34□□□□□ -1.55
SRP54-212ENST00000556992 FIBCD1Q8N539 461 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 SMARCC2Q8TAQ2 1214 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 EAF2Q96CJ1 260 aaPredicted RBP5.34□□□□□ -1.55
SRP54-212ENST00000556992 C8orf37Q96NL8 207 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 PTCHD1Q96NR3 888 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 PLA2G12BQ9BX93 195 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 SIL1Q9H173 461 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 NOL6Q9H6R4 1146 aaKnown RBP5.34□□□□□ -1.55
SRP54-212ENST00000556992 GP6Q9HCN6 339 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 DIAPH3Q9NSV4 1193 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 CHMP5Q9NZZ3 219 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 PALD1Q9ULE6 856 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 MYRFQ9Y2G1 1151 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 RWDD3Q9Y3V2 267 aa5.34□□□□□ -1.55
SRP54-212ENST00000556992 COL18A1P39060 1754 aa5.34□□□□□ -1.56
SRP54-212ENST00000556992 SH3D21A4FU49 640 aa5.33□□□□□ -1.56
SRP54-212ENST00000556992 HSP90AA1P07900 732 aaKnown RBP5.33□□□□□ -1.56
SRP54-212ENST00000556992 NCAM1P13591 858 aa5.33□□□□□ -1.56
SRP54-212ENST00000556992 TNFRSF1AP19438 455 aa5.33□□□□□ -1.56
SRP54-212ENST00000556992 EIF5P55010 431 aaKnown RBP5.33□□□□□ -1.56
SRP54-212ENST00000556992 IFIT5Q13325 482 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms