RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 OTUD6AQ7L8S5 288 aa11.99□□□□□ -0.49
LINC00239-201ENST00000556973 C4orf19Q8IY42 314 aa11.99□□□□□ -0.49
LINC00239-201ENST00000556973 KIAA0319LQ8IZA0 1049 aa11.99□□□□□ -0.49
LINC00239-201ENST00000556973 C4orf32Q8N8J7 132 aa11.99□□□□□ -0.49
LINC00239-201ENST00000556973 USP38Q8NB14 1042 aa11.99□□□□□ -0.49
LINC00239-201ENST00000556973 NEK9Q8TD19 979 aa11.99□□□□□ -0.49
LINC00239-201ENST00000556973 DYDC2Q96IM9 177 aa11.99□□□□□ -0.49
LINC00239-201ENST00000556973 HSD17B14Q9BPX1 270 aa11.99□□□□□ -0.49
LINC00239-201ENST00000556973 FAM49AQ9H0Q0 323 aaPredicted RBP11.99□□□□□ -0.49
LINC00239-201ENST00000556973 ZSWIM4Q9H7M6 989 aa11.99□□□□□ -0.49
LINC00239-201ENST00000556973 CXXC1Q9P0U4 656 aaPredicted RBP11.99□□□□□ -0.49
LINC00239-201ENST00000556973 SEPT9Q9UHD8 586 aaPredicted RBP11.99□□□□□ -0.49
LINC00239-201ENST00000556973 PCDHB6Q9Y5E3 794 aa11.99□□□□□ -0.49
LINC00239-201ENST00000556973 SLC4A7Q9Y6M7 1214 aa11.99□□□□□ -0.49
LINC00239-201ENST00000556973 SQORQ9Y6N5 450 aa11.99□□□□□ -0.49
LINC00239-201ENST00000556973 SIP14410 1827 aa11.99□□□□□ -0.49
LINC00239-201ENST00000556973 LOXHD1Q8IVV2 1947 aa11.99□□□□□ -0.49
LINC00239-201ENST00000556973 ZBBXA8MT70 800 aa11.98□□□□□ -0.49
LINC00239-201ENST00000556973 PTGDRQ13258 359 aa11.98□□□□□ -0.49
LINC00239-201ENST00000556973 PDIA5Q14554 519 aa11.98□□□□□ -0.49
LINC00239-201ENST00000556973 ANO5Q75V66 913 aa11.98□□□□□ -0.49
LINC00239-201ENST00000556973 BRAPQ7Z569 592 aa11.98□□□□□ -0.49
LINC00239-201ENST00000556973 TPH2Q8IWU9 490 aa11.98□□□□□ -0.49
LINC00239-201ENST00000556973 EXOC8Q8IYI6 725 aa11.98□□□□□ -0.49
LINC00239-201ENST00000556973 ZNF710Q8N1W2 664 aa11.98□□□□□ -0.49
LINC00239-201ENST00000556973 METTL13Q8N6R0 699 aa11.98□□□□□ -0.49
LINC00239-201ENST00000556973 DBF4BQ8NFT6 615 aa11.98□□□□□ -0.49
LINC00239-201ENST00000556973 PHOSPHO2Q8TCD6 241 aa11.98□□□□□ -0.49
LINC00239-201ENST00000556973 SEPT8Q92599 483 aa11.98□□□□□ -0.49
LINC00239-201ENST00000556973 LRCH3Q96II8 777 aa11.98□□□□□ -0.49
LINC00239-201ENST00000556973 EIF2AK1Q9BQI3 630 aaKnown RBP11.98□□□□□ -0.49
LINC00239-201ENST00000556973 CELF4Q9BZC1 486 aaKnown RBP11.98□□□□□ -0.49
LINC00239-201ENST00000556973 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.98□□□□□ -0.49
LINC00239-201ENST00000556973 RGL1Q9NZL6 768 aa11.98□□□□□ -0.49
LINC00239-201ENST00000556973 CDY2AQ9Y6F7 541 aa11.98□□□□□ -0.49
LINC00239-201ENST00000556973 KDM3AQ9Y4C1 1321 aa11.97□□□□□ -0.49
LINC00239-201ENST00000556973 XRCC6P12956 609 aaKnown RBP eCLIP11.97□□□□□ -0.49
LINC00239-201ENST00000556973 PDIA4P13667 645 aaKnown RBP11.97□□□□□ -0.49
LINC00239-201ENST00000556973 SYT1P21579 422 aa11.97□□□□□ -0.49
LINC00239-201ENST00000556973 YWHABP31946 246 aaKnown RBP11.97□□□□□ -0.49
LINC00239-201ENST00000556973 FXR2P51116 673 aaKnown RBP eCLIP11.97□□□□□ -0.49
LINC00239-201ENST00000556973 TBC1D8BQ0IIM8 1120 aa11.97□□□□□ -0.49
LINC00239-201ENST00000556973 CTTNQ14247 550 aaKnown RBP11.97□□□□□ -0.49
LINC00239-201ENST00000556973 NBR1Q14596 966 aa11.97□□□□□ -0.49
LINC00239-201ENST00000556973 TMEM266Q2M3C6 531 aa11.97□□□□□ -0.49
LINC00239-201ENST00000556973 MTERF2Q49AM1 385 aa11.97□□□□□ -0.49
LINC00239-201ENST00000556973 FAM43BQ6ZT52 329 aaPredicted RBP11.97□□□□□ -0.49
LINC00239-201ENST00000556973 TET1Q8NFU7 2136 aa11.97□□□□□ -0.49
LINC00239-201ENST00000556973 ERMNQ8TAM6 284 aa11.97□□□□□ -0.49
LINC00239-201ENST00000556973 APBB2Q92870 758 aa11.97□□□□□ -0.49
LINC00239-201ENST00000556973 CEP89Q96ST8 783 aa11.97□□□□□ -0.49
LINC00239-201ENST00000556973 JPH2Q9BR39 696 aaPredicted RBP11.97□□□□□ -0.49
LINC00239-201ENST00000556973 LXNQ9BS40 222 aa11.97□□□□□ -0.49
LINC00239-201ENST00000556973 RAB34Q9BZG1 259 aa11.97□□□□□ -0.49
LINC00239-201ENST00000556973 CYP26B1Q9NR63 512 aa11.97□□□□□ -0.49
LINC00239-201ENST00000556973 FOXD4L1Q9NU39 408 aa11.97□□□□□ -0.49
LINC00239-201ENST00000556973 WRAP73Q9P2S5 460 aaPredicted RBP11.97□□□□□ -0.49
LINC00239-201ENST00000556973 PPME1Q9Y570 386 aa11.97□□□□□ -0.49
LINC00239-201ENST00000556973 TRPV2Q9Y5S1 764 aa11.97□□□□□ -0.49
LINC00239-201ENST00000556973 STK24Q9Y6E0 443 aa11.97□□□□□ -0.49
LINC00239-201ENST00000556973 RANBP2P49792 3224 aaKnown RBP11.96□□□□□ -0.49
LINC00239-201ENST00000556973 GBF1Q92538 1859 aa11.96□□□□□ -0.49
LINC00239-201ENST00000556973 IGKV6-21A0A0C4DH24 114 aa11.96□□□□□ -0.49
LINC00239-201ENST00000556973 VPS37CA5D8V6 355 aaPredicted RBP11.96□□□□□ -0.49
LINC00239-201ENST00000556973 MAFO75444 373 aaPredicted RBP11.96□□□□□ -0.49
LINC00239-201ENST00000556973 LYPLA2O95372 231 aa11.96□□□□□ -0.49
LINC00239-201ENST00000556973 ATP2A2P16615 1042 aaKnown RBP11.96□□□□□ -0.49
LINC00239-201ENST00000556973 PRPHP41219 470 aa11.96□□□□□ -0.49
LINC00239-201ENST00000556973 KCNJ6P48051 423 aa11.96□□□□□ -0.49
LINC00239-201ENST00000556973 DNM2P50570 870 aa11.96□□□□□ -0.49
LINC00239-201ENST00000556973 CRYBB1P53674 252 aaPredicted RBP11.96□□□□□ -0.49
LINC00239-201ENST00000556973 CDC42EP1Q00587 391 aa11.96□□□□□ -0.49
LINC00239-201ENST00000556973 CYP4A11Q02928 519 aa11.96□□□□□ -0.49
LINC00239-201ENST00000556973 TMEM62Q0P6H9 643 aa11.96□□□□□ -0.49
LINC00239-201ENST00000556973 LPIN1Q14693 890 aa11.96□□□□□ -0.49
LINC00239-201ENST00000556973 FBXO47Q5MNV8 452 aa11.96□□□□□ -0.49
LINC00239-201ENST00000556973 FAM109BQ6ICB4 259 aaPredicted RBP11.96□□□□□ -0.49
LINC00239-201ENST00000556973 TSHZ1Q6ZSZ6 1077 aa11.96□□□□□ -0.49
LINC00239-201ENST00000556973 LINC01465Q8N7H1 131 aa11.96□□□□□ -0.49
LINC00239-201ENST00000556973 CEP170P1Q96L14 293 aa11.96□□□□□ -0.49
LINC00239-201ENST00000556973 SLC9A7Q96T83 725 aa11.96□□□□□ -0.49
LINC00239-201ENST00000556973 IFIH1Q9BYX4 1025 aaKnown RBP11.96□□□□□ -0.49
LINC00239-201ENST00000556973 OSBPL7Q9BZF2 842 aa11.96□□□□□ -0.49
LINC00239-201ENST00000556973 SUGCTQ9HAC7 445 aa11.96□□□□□ -0.49
LINC00239-201ENST00000556973 TUFT1Q9NNX1 390 aa11.96□□□□□ -0.49
LINC00239-201ENST00000556973 ARID2Q68CP9 1835 aa11.95□□□□□ -0.5
LINC00239-201ENST00000556973 TMEM150BA6NC51 233 aa11.95□□□□□ -0.5
LINC00239-201ENST00000556973 POTEMA6NI47 508 aa11.95□□□□□ -0.5
LINC00239-201ENST00000556973 GPR32O75388 356 aa11.95□□□□□ -0.5
LINC00239-201ENST00000556973 HSP90AA1P07900 732 aaKnown RBP11.95□□□□□ -0.5
LINC00239-201ENST00000556973 SPATA31C1P0DKV0 1188 aa11.95□□□□□ -0.5
LINC00239-201ENST00000556973 GHRP10912 638 aa11.95□□□□□ -0.5
LINC00239-201ENST00000556973 MUTP22033 750 aa11.95□□□□□ -0.5
LINC00239-201ENST00000556973 RPA1P27694 616 aa11.95□□□□□ -0.5
LINC00239-201ENST00000556973 RFC5P40937 340 aa11.95□□□□□ -0.5
LINC00239-201ENST00000556973 NPEPPSP55786 919 aa11.95□□□□□ -0.5
LINC00239-201ENST00000556973 WDR5P61964 334 aaKnown RBP11.95□□□□□ -0.5
LINC00239-201ENST00000556973 RAB30Q15771 203 aa11.95□□□□□ -0.5
LINC00239-201ENST00000556973 TCTN1Q2MV58 587 aa11.95□□□□□ -0.5
LINC00239-201ENST00000556973 ODR4Q5SWX8 454 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms