RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 SLC9A2Q9UBY0 812 aa15.96■□□□□ 0.15
ACTN1-219ENST00000556432 MYO15AQ9UKN7 3530 aa15.96■□□□□ 0.15
ACTN1-219ENST00000556432 LOXHD1Q8IVV2 1947 aa15.96■□□□□ 0.14
ACTN1-219ENST00000556432 HIDE1A8MVS5 230 aa15.95■□□□□ 0.14
ACTN1-219ENST00000556432 C2CD4DB7Z1M9 353 aa15.95■□□□□ 0.14
ACTN1-219ENST00000556432 MGEA5O60502 916 aa15.95■□□□□ 0.14
ACTN1-219ENST00000556432 FGFR1P11362 822 aa15.95■□□□□ 0.14
ACTN1-219ENST00000556432 TROAPQ12815 778 aa15.95■□□□□ 0.14
ACTN1-219ENST00000556432 HDAC1Q13547 482 aaPredicted RBP15.95■□□□□ 0.14
ACTN1-219ENST00000556432 ODR4Q5SWX8 454 aa15.95■□□□□ 0.14
ACTN1-219ENST00000556432 SLC24A5Q71RS6 500 aa15.95■□□□□ 0.14
ACTN1-219ENST00000556432 TMC7Q7Z402 723 aa15.95■□□□□ 0.14
ACTN1-219ENST00000556432 NME8Q8N427 588 aa15.95■□□□□ 0.14
ACTN1-219ENST00000556432 RASGRP4Q8TDF6 673 aa15.95■□□□□ 0.14
ACTN1-219ENST00000556432 MRPS27Q92552 414 aaKnown RBP15.95■□□□□ 0.14
ACTN1-219ENST00000556432 CASP10Q92851 521 aa15.95■□□□□ 0.14
ACTN1-219ENST00000556432 NECTIN4Q96NY8 510 aa15.95■□□□□ 0.14
ACTN1-219ENST00000556432 PPP1R16BQ96T49 567 aa15.95■□□□□ 0.14
ACTN1-219ENST00000556432 PCYT2Q99447 389 aa15.95■□□□□ 0.14
ACTN1-219ENST00000556432 SMOC2Q9H3U7 446 aa15.95■□□□□ 0.14
ACTN1-219ENST00000556432 POMKQ9H5K3 350 aa15.95■□□□□ 0.14
ACTN1-219ENST00000556432 PSTPIP2Q9H939 334 aa15.95■□□□□ 0.14
ACTN1-219ENST00000556432 ERVK-5Q9HDB9 667 aa15.95■□□□□ 0.14
ACTN1-219ENST00000556432 NGRNQ9NPE2 291 aaKnown RBP15.95■□□□□ 0.14
ACTN1-219ENST00000556432 LZTS1Q9Y250 596 aa15.95■□□□□ 0.14
ACTN1-219ENST00000556432 KDM3AQ9Y4C1 1321 aa15.94■□□□□ 0.14
ACTN1-219ENST00000556432 SMIM35A0A1B0GVV1 85 aa15.94■□□□□ 0.14
ACTN1-219ENST00000556432 SPDYE3A6NKU9 549 aa15.94■□□□□ 0.14
ACTN1-219ENST00000556432 ASGR2P07307 311 aa15.94■□□□□ 0.14
ACTN1-219ENST00000556432 KRT17Q04695 432 aa15.94■□□□□ 0.14
ACTN1-219ENST00000556432 KCNC3Q14003 757 aa15.94■□□□□ 0.14
ACTN1-219ENST00000556432 UBE2SQ16763 222 aa15.94■□□□□ 0.14
ACTN1-219ENST00000556432 MTHFD1LQ6UB35 978 aa15.94■□□□□ 0.14
ACTN1-219ENST00000556432 FLCNQ8NFG4 579 aa15.94■□□□□ 0.14
ACTN1-219ENST00000556432 CTCFLQ8NI51 663 aaPredicted RBP15.94■□□□□ 0.14
ACTN1-219ENST00000556432 SDF4Q9BRK5 362 aa15.94■□□□□ 0.14
ACTN1-219ENST00000556432 RGS18Q9NS28 235 aa15.94■□□□□ 0.14
ACTN1-219ENST00000556432 ST3GAL5Q9UNP4 418 aa15.94■□□□□ 0.14
ACTN1-219ENST00000556432 NOC2LQ9Y3T9 749 aaKnown RBP15.94■□□□□ 0.14
ACTN1-219ENST00000556432 UBIAD1Q9Y5Z9 338 aa15.94■□□□□ 0.14
ACTN1-219ENST00000556432 VPS13AQ96RL7 3174 aa15.94■□□□□ 0.14
ACTN1-219ENST00000556432 FNDC1Q4ZHG4 1894 aaPredicted RBP15.93■□□□□ 0.14
ACTN1-219ENST00000556432 GPR182O15218 404 aa15.93■□□□□ 0.14
ACTN1-219ENST00000556432 WEE2P0C1S8 567 aa15.93■□□□□ 0.14
ACTN1-219ENST00000556432 PDE4AP27815 886 aa15.93■□□□□ 0.14
ACTN1-219ENST00000556432 KIF5BP33176 963 aa15.93■□□□□ 0.14
ACTN1-219ENST00000556432 PBX3P40426 434 aa15.93■□□□□ 0.14
ACTN1-219ENST00000556432 STAT5BP51692 787 aa15.93■□□□□ 0.14
ACTN1-219ENST00000556432 ACTR2P61160 394 aa15.93■□□□□ 0.14
ACTN1-219ENST00000556432 ITIH3Q06033 890 aa15.93■□□□□ 0.14
ACTN1-219ENST00000556432 ABI1Q8IZP0 508 aa15.93■□□□□ 0.14
ACTN1-219ENST00000556432 TDRD5Q8NAT2 981 aaKnown RBP15.93■□□□□ 0.14
ACTN1-219ENST00000556432 ZNF558Q96NG5 402 aa15.93■□□□□ 0.14
ACTN1-219ENST00000556432 MYL10Q9BUA6 226 aa15.93■□□□□ 0.14
ACTN1-219ENST00000556432 SPZ1Q9BXG8 430 aa15.93■□□□□ 0.14
ACTN1-219ENST00000556432 CWH43Q9H720 699 aa15.93■□□□□ 0.14
ACTN1-219ENST00000556432 JADE2Q9NQC1 790 aa15.93■□□□□ 0.14
ACTN1-219ENST00000556432 C9IYK1 514 aa15.92■□□□□ 0.14
ACTN1-219ENST00000556432 KLRC1P26715 233 aa15.92■□□□□ 0.14
ACTN1-219ENST00000556432 PPM1AP35813 382 aa15.92■□□□□ 0.14
ACTN1-219ENST00000556432 MTHFRP42898 656 aa15.92■□□□□ 0.14
ACTN1-219ENST00000556432 PLCB3Q01970 1234 aa15.92■□□□□ 0.14
ACTN1-219ENST00000556432 RARS2Q5T160 578 aaKnown RBP15.92■□□□□ 0.14
ACTN1-219ENST00000556432 KCNT2Q6UVM3 1135 aa15.92■□□□□ 0.14
ACTN1-219ENST00000556432 PLPPR4Q7Z2D5 763 aa15.92■□□□□ 0.14
ACTN1-219ENST00000556432 PLEKHM2Q8IWE5 1019 aa15.92■□□□□ 0.14
ACTN1-219ENST00000556432 TMEM87AQ8NBN3 555 aa15.92■□□□□ 0.14
ACTN1-219ENST00000556432 TMEM40Q8WWA1 233 aa15.92■□□□□ 0.14
ACTN1-219ENST00000556432 ADAM7Q9H2U9 754 aa15.92■□□□□ 0.14
ACTN1-219ENST00000556432 TMEM161AQ9NX61 479 aa15.92■□□□□ 0.14
ACTN1-219ENST00000556432 LIMD1Q9UGP4 676 aa15.92■□□□□ 0.14
ACTN1-219ENST00000556432 HCFC2Q9Y5Z7 792 aa15.92■□□□□ 0.14
ACTN1-219ENST00000556432 U3KPZ7 1027 aaPredicted RBP15.92■□□□□ 0.14
ACTN1-219ENST00000556432 MYO10Q9HD67 2058 aa15.91■□□□□ 0.14
ACTN1-219ENST00000556432 BACH1O14867 736 aa15.91■□□□□ 0.14
ACTN1-219ENST00000556432 MAFGO15525 162 aa15.91■□□□□ 0.14
ACTN1-219ENST00000556432 HOXA2O43364 376 aa15.91■□□□□ 0.14
ACTN1-219ENST00000556432 SMC1AQ14683 1233 aaKnown RBP15.91■□□□□ 0.14
ACTN1-219ENST00000556432 KIZQ2M2Z5 673 aa15.91■□□□□ 0.14
ACTN1-219ENST00000556432 CHD1LQ86WJ1 897 aa15.91■□□□□ 0.14
ACTN1-219ENST00000556432 LRRC43Q8N309 656 aa15.91■□□□□ 0.14
ACTN1-219ENST00000556432 RNF169Q8NCN4 708 aa15.91■□□□□ 0.14
ACTN1-219ENST00000556432 NCOA7Q8NI08 942 aa15.91■□□□□ 0.14
ACTN1-219ENST00000556432 KCNG4Q8TDN1 519 aa15.91■□□□□ 0.14
ACTN1-219ENST00000556432 TMEM117Q9H0C3 514 aa15.91■□□□□ 0.14
ACTN1-219ENST00000556432 CDHR5Q9HBB8 845 aa15.91■□□□□ 0.14
ACTN1-219ENST00000556432 KCNH7Q9NS40 1196 aa15.91■□□□□ 0.14
ACTN1-219ENST00000556432 SPG21Q9NZD8 308 aa15.91■□□□□ 0.14
ACTN1-219ENST00000556432 DBR1Q9UK59 544 aaKnown RBP15.91■□□□□ 0.14
ACTN1-219ENST00000556432 CLCN5P51795 746 aa15.9■□□□□ 0.14
ACTN1-219ENST00000556432 BMS1Q14692 1282 aaKnown RBP15.9■□□□□ 0.14
ACTN1-219ENST00000556432 FAM43BQ6ZT52 329 aaPredicted RBP15.9■□□□□ 0.14
ACTN1-219ENST00000556432 KIAA0319LQ8IZA0 1049 aa15.9■□□□□ 0.14
ACTN1-219ENST00000556432 ZNF654Q8IZM8 581 aa15.9■□□□□ 0.14
ACTN1-219ENST00000556432 OSMRQ99650 979 aa15.9■□□□□ 0.14
ACTN1-219ENST00000556432 LZTS2Q9BRK4 669 aa15.9■□□□□ 0.14
ACTN1-219ENST00000556432 IL25Q9H293 177 aa15.9■□□□□ 0.14
ACTN1-219ENST00000556432 PCDHA6Q9UN73 950 aa15.9■□□□□ 0.14
ACTN1-219ENST00000556432 PCDHA8Q9Y5H6 950 aa15.9■□□□□ 0.14
ACTN1-219ENST00000556432 WDR87Q6ZQQ6 2873 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms