RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 CDX2Q99626 313 aaPredicted RBP10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 FAM83CQ9BQN1 747 aa10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 IL1RAPL2Q9NP60 686 aa10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 GPN3Q9UHW5 284 aaPredicted RBP10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 RNF112Q9ULX5 631 aa10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 ATP11BQ9Y2G3 1177 aa10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 RLFQ13129 1914 aa10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 VCANP13611 3396 aa10.76□□□□□ -0.69
GTF2A1-204ENST00000556268 KBTBD13C9JR72 458 aa10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 GOLIM4O00461 696 aa10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 PRKAB2O43741 272 aa10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 FLOT1O75955 427 aa10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 FCER1AP12319 257 aa10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 AKR1B1P15121 316 aa10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 ITGB8P26012 769 aa10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 ADD2P35612 726 aa10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 CDK8P49336 464 aa10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 SMAD3P84022 425 aaKnown RBP10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 TLE2Q04725 743 aa10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 TRIM60Q495X7 471 aa10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 ANO1Q5XXA6 986 aa10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 ALG1LQ6GMV1 187 aa10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 RIOX2Q8IUF8 465 aa10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 RPAP2Q8IXW5 612 aaPredicted RBP10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 CLASRPQ8N2M8 674 aaKnown RBP10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 KIF1BPQ96EK5 621 aa10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 TANGO6Q9C0B7 1094 aa10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 ZFYVE1Q9HBF4 777 aa10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 PDLIM7Q9NR12 457 aa10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 TACC3Q9Y6A5 838 aa10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 SMCHD1A6NHR9 2005 aa10.75□□□□□ -0.69
GTF2A1-204ENST00000556268 KIAA0355O15063 1070 aa10.74□□□□□ -0.69
GTF2A1-204ENST00000556268 WDR46O15213 610 aaKnown RBP10.74□□□□□ -0.69
GTF2A1-204ENST00000556268 ZNF865P0CJ78 1059 aaPredicted RBP10.74□□□□□ -0.69
GTF2A1-204ENST00000556268 EEF2P13639 858 aaKnown RBP10.74□□□□□ -0.69
GTF2A1-204ENST00000556268 ATP5JP18859 108 aa10.74□□□□□ -0.69
GTF2A1-204ENST00000556268 RNF43Q68DV7 783 aa10.74□□□□□ -0.69
GTF2A1-204ENST00000556268 C16orf86Q6ZW13 317 aa10.74□□□□□ -0.69
GTF2A1-204ENST00000556268 SPICE1Q8N0Z3 855 aa10.74□□□□□ -0.69
GTF2A1-204ENST00000556268 C3orf58Q8NDZ4 430 aa10.74□□□□□ -0.69
GTF2A1-204ENST00000556268 REPS2Q8NFH8 660 aa10.74□□□□□ -0.69
GTF2A1-204ENST00000556268 PANK1Q8TE04 598 aa10.74□□□□□ -0.69
GTF2A1-204ENST00000556268 TOX2Q96NM4 488 aa10.74□□□□□ -0.69
GTF2A1-204ENST00000556268 TINF2Q9BSI4 451 aa10.74□□□□□ -0.69
GTF2A1-204ENST00000556268 TTYH1Q9H313 450 aaPredicted RBP10.74□□□□□ -0.69
GTF2A1-204ENST00000556268 ARMT1Q9H993 441 aa10.74□□□□□ -0.69
GTF2A1-204ENST00000556268 KANSL2Q9H9L4 492 aa10.74□□□□□ -0.69
GTF2A1-204ENST00000556268 ZBTB40Q9NUA8 1239 aa10.74□□□□□ -0.69
GTF2A1-204ENST00000556268 VWA5AO00534 786 aa10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 RAB11FIP3O75154 756 aa10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 IFIT2P09913 472 aaKnown RBP10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 TAL1P17542 331 aaPredicted RBP10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 STAT3P40763 770 aa10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 EPHB4P54760 987 aa10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 ICA1Q05084 483 aa10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 LRP8Q14114 963 aa10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 PLS1Q14651 629 aa10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 UBE3CQ15386 1083 aa10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 FAM47AQ5JRC9 791 aa10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 ARTNQ5T4W7 220 aa10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 CCSAPQ6IQ19 270 aaPredicted RBP10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 ANKRD33Q7Z3H0 272 aa10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 MSL3Q8N5Y2 521 aaKnown RBP10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 KLHDC9Q8NEP7 349 aa10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 FERMT2Q96AC1 680 aa10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 FAM161BQ96MY7 647 aa10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 HAUS7Q99871 368 aa10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 OSBPL7Q9BZF2 842 aa10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 SH2D4AQ9H788 454 aa10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 TMEM39AQ9NV64 488 aa10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 FBXO28Q9NVF7 368 aa10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 ZNF214Q9UL59 606 aaPredicted RBP10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 ACTL7BQ9Y614 415 aa10.73□□□□□ -0.69
GTF2A1-204ENST00000556268 CYP2D7A0A087X1C5 515 aa10.72□□□□□ -0.69
GTF2A1-204ENST00000556268 ADAMTS4O75173 837 aa10.72□□□□□ -0.69
GTF2A1-204ENST00000556268 MBD4O95243 580 aa10.72□□□□□ -0.69
GTF2A1-204ENST00000556268 PGK2P07205 417 aa10.72□□□□□ -0.69
GTF2A1-204ENST00000556268 RARBP10826 455 aa10.72□□□□□ -0.69
GTF2A1-204ENST00000556268 USP11P51784 963 aa10.72□□□□□ -0.69
GTF2A1-204ENST00000556268 CDPF1Q6NVV7 123 aa10.72□□□□□ -0.69
GTF2A1-204ENST00000556268 CTR9Q6PD62 1173 aa10.72□□□□□ -0.69
GTF2A1-204ENST00000556268 MAMDC4Q6UXC1 1216 aa10.72□□□□□ -0.69
GTF2A1-204ENST00000556268 MMP19Q99542 508 aa10.72□□□□□ -0.69
GTF2A1-204ENST00000556268 BOLA2Q9H3K6 86 aa10.72□□□□□ -0.69
GTF2A1-204ENST00000556268 XPNPEP3Q9NQH7 507 aa10.72□□□□□ -0.69
GTF2A1-204ENST00000556268 RAD18Q9NS91 495 aa10.72□□□□□ -0.69
GTF2A1-204ENST00000556268 PAG1Q9NWQ8 432 aa10.72□□□□□ -0.69
GTF2A1-204ENST00000556268 PPP1R9AQ9ULJ8 1098 aa10.72□□□□□ -0.69
GTF2A1-204ENST00000556268 AP4E1Q9UPM8 1137 aa10.72□□□□□ -0.69
GTF2A1-204ENST00000556268 ZBED9Q6R2W3 1325 aa10.72□□□□□ -0.69
GTF2A1-204ENST00000556268 PRUNE2Q8WUY3 3088 aa10.72□□□□□ -0.69
GTF2A1-204ENST00000556268 ZNF236Q9UL36 1845 aa10.72□□□□□ -0.69
GTF2A1-204ENST00000556268 SPTBN5Q9NRC6 3674 aaKnown RBP10.71□□□□□ -0.69
GTF2A1-204ENST00000556268 DNAJC25-GNG10A0A024R161 153 aa10.71□□□□□ -0.69
GTF2A1-204ENST00000556268 TMEM265A0A087WTH1 108 aa10.71□□□□□ -0.69
GTF2A1-204ENST00000556268 ATP2A1O14983 1001 aa10.71□□□□□ -0.69
GTF2A1-204ENST00000556268 SNAI1O95863 264 aaPredicted RBP10.71□□□□□ -0.69
GTF2A1-204ENST00000556268 CHGBP05060 677 aa10.71□□□□□ -0.69
GTF2A1-204ENST00000556268 CLTBP09497 229 aa10.71□□□□□ -0.69
GTF2A1-204ENST00000556268 GSTT1P30711 240 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 1529 ms