RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	RFC1	P35251	1148 aa	Predicted RBP	13.36	□□□□□ -0.27
TMPO-212	ENST00000556029	NFIA	Q12857	509 aa		13.36	□□□□□ -0.27
TMPO-212	ENST00000556029	TNFAIP1	Q13829	316 aa		13.36	□□□□□ -0.27
TMPO-212	ENST00000556029	CIAPIN1	Q6FI81	312 aa		13.36	□□□□□ -0.27
TMPO-212	ENST00000556029	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.36	□□□□□ -0.27
TMPO-212	ENST00000556029	FNBP1	Q96RU3	617 aa		13.36	□□□□□ -0.27
TMPO-212	ENST00000556029	MMTAG2	Q9BU76	263 aa	Known RBP	13.36	□□□□□ -0.27
TMPO-212	ENST00000556029	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.36	□□□□□ -0.27
TMPO-212	ENST00000556029	hCG_1984214	I3L0E3	225 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	EPHB6	O15197	1021 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	EXOC3	O60645	756 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	POLR2M	P0CAP2	368 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	EPB41	P11171	864 aa	Known RBP	13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	PSMD2	Q13200	908 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	VPS52	Q8N1B4	723 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	ZNF713	Q8N859	430 aa	Predicted RBP	13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	LRRC45	Q96CN5	670 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	GLT8D2	Q9H1C3	349 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	LCMT1	Q9UIC8	334 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	TULP2	O00295	520 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	SYF2	O95926	243 aa	Known RBP	13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	MYBL2	P10244	700 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	PAK2	Q13177	524 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	PDXDC1	Q6P996	788 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	FOXR1	Q6PIV2	292 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	NUCKS1	Q9H1E3	243 aa	Known RBP	13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	BLOC1S4	Q9NUP1	217 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	EHD2	Q9NZN4	543 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	ZNF263	O14978	683 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	SLURP2	P0DP57	97 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	EHHADH	Q08426	723 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	PRAMEF18	Q5VWM3	479 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	CDC42EP5	Q6NZY7	148 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	LRRC31	Q6UY01	552 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	RUFY4	Q6ZNE9	571 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	TSKS	Q9UJT2	592 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	TTLL3	Q9Y4R7	772 aa		13.35	□□□□□ -0.27
TMPO-212	ENST00000556029	GON4L	Q3T8J9	2241 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029		F5H6K3	240 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	AARS	P49588	968 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	FXR2	P51116	673 aa	Known RBP eCLIP	13.34	□□□□□ -0.27	9e-8	■■■□□ 16.8
TMPO-212	ENST00000556029	EPHB4	P54760	987 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	TPD52	P55327	224 aa	Predicted RBP	13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	KLRC3	Q07444	240 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	DDR1	Q08345	913 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	SLC51A	Q86UW1	340 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	MMGT1	Q8N4V1	131 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	U2AF1L4	Q8WU68	220 aa	Known RBP	13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	GJA10	Q969M2	543 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	PNMA5	Q96PV4	448 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	ZNF341	Q9BYN7	854 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	PIM2	Q9P1W9	311 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	MYH13	Q9UKX3	1938 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	CD19	P15391	556 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	GUCY2D	Q02846	1103 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	COASY	Q13057	564 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	FAM83B	Q5T0W9	1011 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	CREG2	Q8IUH2	290 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	CTAGE3P	Q8IX95	158 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	SIK3	Q9Y2K2	1263 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	NKRF	O15226	690 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	PPFIA4	O75335	1185 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	FTCD	O95954	541 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	PDHB	P11177	359 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	IFT88	Q13099	833 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	PDIA5	Q14554	519 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	HDAC7	Q8WUI4	952 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	IFT74	Q96LB3	600 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	NT5C3A	Q9H0P0	336 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	DMGDH	Q9UI17	866 aa	Known RBP	13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	LTBP4	Q8N2S1	1624 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	CA8	P35219	290 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	SYDE2	Q5VT97	1194 aa		13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	NAP1L4	Q99733	375 aa	Known RBP	13.34	□□□□□ -0.27
TMPO-212	ENST00000556029	COL4A1	P02462	1669 aa		13.33	□□□□□ -0.27
TMPO-212	ENST00000556029	GPR75-ASB3	A0A0A6YYF3	556 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	ESYT2	A0FGR8	921 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	GOLGA8K	D6RF30	607 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	CYP2J2	P51589	502 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	STAT2	P52630	851 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	HHAT	Q5VTY9	493 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	MIPOL1	Q8TD10	442 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	NUDT12	Q9BQG2	462 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	CAPS2	Q9BXY5	557 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	KCNQ5	Q9NR82	932 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	TMEM51	Q9NW97	253 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	ROBO3	Q96MS0	1386 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	PNMA6F	A0A0J9YX94	578 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	SERPING1	P05155	500 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	SMARCA1	P28370	1054 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	GCK	P35557	465 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	CLUL1	Q15846	466 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	CASC4	Q6P4E1	433 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	XIRP1	Q702N8	1843 aa	Known RBP	13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	TAF1	P21675	1872 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	CASZ1	Q86V15	1759 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	RGS16	O15492	202 aa	Predicted RBP	13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	GNA14	O95837	355 aa		13.33	□□□□□ -0.28
TMPO-212	ENST00000556029	TM4SF1	P30408	202 aa		13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms