RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 CCDC60Q8IWA6 550 aaPredicted RBP4.41□□□□□ -1.7
LINC00648-202ENST00000555985 FBXO18Q8NFZ0 1043 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 RDM1Q8NG50 284 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 LMBR1Q8WVP7 490 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 WASF1Q92558 559 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 TMX3Q96JJ7 454 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 ALG1Q9BT22 464 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 OSBPL7Q9BZF2 842 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 IL23AQ9NPF7 189 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 TBC1D22BQ9NU19 505 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 TMEM39AQ9NV64 488 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 TET1Q8NFU7 2136 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 NRCAMQ92823 1304 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 KDM3AQ9Y4C1 1321 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 IGKV6-21A0A0C4DH24 114 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 TLR3O15455 904 aaKnown RBP4.41□□□□□ -1.7
LINC00648-202ENST00000555985 ZNF862O60290 1169 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 PFKMP08237 780 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 GCFC2P16383 781 aaKnown RBP4.41□□□□□ -1.7
LINC00648-202ENST00000555985 SLC26A2P50443 739 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 TOB1P50616 345 aaPredicted RBP4.41□□□□□ -1.7
LINC00648-202ENST00000555985 SMAD3P84022 425 aaKnown RBP4.41□□□□□ -1.7
LINC00648-202ENST00000555985 MDM2Q00987 491 aaPredicted RBP4.41□□□□□ -1.7
LINC00648-202ENST00000555985 FPGSQ05932 587 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 ORC2Q13416 577 aaPredicted RBP4.41□□□□□ -1.7
LINC00648-202ENST00000555985 PTGISQ16647 500 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 BRDTQ58F21 947 aaPredicted RBP4.41□□□□□ -1.7
LINC00648-202ENST00000555985 RUFY4Q6ZNE9 571 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 PLA2G4DQ86XP0 818 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 PPP1R13LQ8WUF5 828 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.41□□□□□ -1.7
LINC00648-202ENST00000555985 FOXP1Q9H334 677 aaPredicted RBP4.41□□□□□ -1.7
LINC00648-202ENST00000555985 UNC45AQ9H3U1 944 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 HIPK3Q9H422 1215 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 SMARCAD1Q9H4L7 1026 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 MLXIPQ9HAP2 919 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 SPTLC3Q9NUV7 552 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 NLRC5Q86WI3 1866 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 CPLX1O14810 134 aa4.4□□□□□ -1.7
LINC00648-202ENST00000555985 TREHO43280 583 aa4.4□□□□□ -1.7
LINC00648-202ENST00000555985 CTIFO43310 598 aaKnown RBP4.4□□□□□ -1.7
LINC00648-202ENST00000555985 CYP2C9P11712 490 aa4.4□□□□□ -1.7
LINC00648-202ENST00000555985 CSF2RAP15509 400 aa4.4□□□□□ -1.7
LINC00648-202ENST00000555985 CYP2C18P33260 490 aa4.4□□□□□ -1.7
LINC00648-202ENST00000555985 KRT2P35908 639 aa4.4□□□□□ -1.7
LINC00648-202ENST00000555985 MCM2P49736 904 aa4.4□□□□□ -1.7
LINC00648-202ENST00000555985 NLRP5P59047 1200 aa4.4□□□□□ -1.7
LINC00648-202ENST00000555985 PPIGQ13427 754 aaKnown RBP eCLIP4.4□□□□□ -1.7
LINC00648-202ENST00000555985 NONOQ15233 471 aaKnown RBP eCLIP4.4□□□□□ -1.7
LINC00648-202ENST00000555985 UGCGQ16739 394 aa4.4□□□□□ -1.7
LINC00648-202ENST00000555985 PLEKHG4Q58EX7 1191 aa4.4□□□□□ -1.7
LINC00648-202ENST00000555985 FAM43BQ6ZT52 329 aaPredicted RBP4.4□□□□□ -1.7
LINC00648-202ENST00000555985 NOL8Q76FK4 1167 aaKnown RBP4.4□□□□□ -1.7
LINC00648-202ENST00000555985 NEK8Q86SG6 692 aa4.4□□□□□ -1.7
LINC00648-202ENST00000555985 CCDC83Q8IWF9 413 aa4.4□□□□□ -1.7
LINC00648-202ENST00000555985 FAM20AQ96MK3 541 aa4.4□□□□□ -1.7
LINC00648-202ENST00000555985 ZNF577Q9BSK1 485 aa4.4□□□□□ -1.7
LINC00648-202ENST00000555985 NIFKQ9BYG3 293 aaKnown RBP4.4□□□□□ -1.7
LINC00648-202ENST00000555985 TSPYL1Q9H0U9 437 aa4.4□□□□□ -1.7
LINC00648-202ENST00000555985 ERAP1Q9NZ08 941 aa4.4□□□□□ -1.7
LINC00648-202ENST00000555985 CALCOCO1Q9P1Z2 691 aa4.4□□□□□ -1.7
LINC00648-202ENST00000555985 WRAP73Q9P2S5 460 aaPredicted RBP4.4□□□□□ -1.7
LINC00648-202ENST00000555985 PCDHA2Q9Y5H9 948 aa4.4□□□□□ -1.7
LINC00648-202ENST00000555985 SQORQ9Y6N5 450 aa4.4□□□□□ -1.7
LINC00648-202ENST00000555985 MORC2Q9Y6X9 1032 aaPredicted RBP4.4□□□□□ -1.7
LINC00648-202ENST00000555985 PRUNE2Q8WUY3 3088 aa4.4□□□□□ -1.71
LINC00648-202ENST00000555985 C17orf102A2RUQ5 167 aa4.4□□□□□ -1.71
LINC00648-202ENST00000555985 BTBD18B2RXH4 712 aa4.4□□□□□ -1.71
LINC00648-202ENST00000555985 EML1O00423 815 aa4.4□□□□□ -1.71
LINC00648-202ENST00000555985 PARNO95453 639 aaKnown RBP4.4□□□□□ -1.71
LINC00648-202ENST00000555985 C22orf31O95567 290 aa4.4□□□□□ -1.71
LINC00648-202ENST00000555985 CHRNA1P02708 482 aa4.4□□□□□ -1.71
LINC00648-202ENST00000555985 LINC00271P0C7V0 271 aa4.4□□□□□ -1.71
LINC00648-202ENST00000555985 SELPP16109 830 aa4.4□□□□□ -1.71
LINC00648-202ENST00000555985 NUCB2P80303 420 aa4.4□□□□□ -1.71
LINC00648-202ENST00000555985 KRT76Q01546 638 aa4.4□□□□□ -1.71
LINC00648-202ENST00000555985 AKAP17AQ02040 695 aaKnown RBP4.4□□□□□ -1.71
LINC00648-202ENST00000555985 TERF2Q15554 542 aa4.4□□□□□ -1.71
LINC00648-202ENST00000555985 INF2Q27J81 1249 aa4.4□□□□□ -1.71
LINC00648-202ENST00000555985 CPLX2Q6PUV4 134 aaKnown RBP4.4□□□□□ -1.71
LINC00648-202ENST00000555985 MAMSTRQ6ZN01 415 aa4.4□□□□□ -1.71
LINC00648-202ENST00000555985 GPT2Q8TD30 523 aa4.4□□□□□ -1.71
LINC00648-202ENST00000555985 ATP8B4Q8TF62 1192 aa4.4□□□□□ -1.71
LINC00648-202ENST00000555985 SDF4Q9BRK5 362 aa4.4□□□□□ -1.71
LINC00648-202ENST00000555985 YY1AP1Q9H869 796 aa4.4□□□□□ -1.71
LINC00648-202ENST00000555985 RC3H2Q9HBD1 1191 aaKnown RBP4.4□□□□□ -1.71
LINC00648-202ENST00000555985 COL6A3P12111 3177 aa4.4□□□□□ -1.71
LINC00648-202ENST00000555985 FNDC1Q4ZHG4 1894 aaPredicted RBP4.4□□□□□ -1.71
LINC00648-202ENST00000555985 TMEM265A0A087WTH1 108 aa4.39□□□□□ -1.71
LINC00648-202ENST00000555985 SMIM35A0A1B0GVV1 85 aa4.39□□□□□ -1.71
LINC00648-202ENST00000555985 SORBS3O60504 671 aa4.39□□□□□ -1.71
LINC00648-202ENST00000555985 GPR32O75388 356 aa4.39□□□□□ -1.71
LINC00648-202ENST00000555985 BAIAP3O94812 1187 aa4.39□□□□□ -1.71
LINC00648-202ENST00000555985 LYPLA2O95372 231 aa4.39□□□□□ -1.71
LINC00648-202ENST00000555985 SFNP31947 248 aa4.39□□□□□ -1.71
LINC00648-202ENST00000555985 GRIK4Q16099 956 aa4.39□□□□□ -1.71
LINC00648-202ENST00000555985 IL17AQ16552 155 aa4.39□□□□□ -1.71
LINC00648-202ENST00000555985 PRR16Q569H4 304 aa4.39□□□□□ -1.71
LINC00648-202ENST00000555985 ZNF618Q5T7W0 954 aa4.39□□□□□ -1.71
LINC00648-202ENST00000555985 MTHFD1LQ6UB35 978 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms