RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 MED24O75448 989 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 FLOT1O75955 427 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 HEXIM1O94992 359 aaKnown RBP7.66□□□□□ -1.18
TDP1-213ENST00000555880 FTCDO95954 541 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 FAM228BP0C875 321 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 EPB41P11171 864 aaKnown RBP7.66□□□□□ -1.18
TDP1-213ENST00000555880 EEF2P13639 858 aaKnown RBP7.66□□□□□ -1.18
TDP1-213ENST00000555880 RPA1P27694 616 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 STAT3P40763 770 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 PTPN5P54829 565 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 GUCY2DQ02846 1103 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 DDR1Q08345 913 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 RPS6KA1Q15418 735 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 EXOC3L4Q17RC7 722 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 CERKLQ49MI3 558 aaPredicted RBP7.66□□□□□ -1.18
TDP1-213ENST00000555880 Q4G0T1 1027 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 DNAJC21Q5F1R6 531 aaKnown RBP7.66□□□□□ -1.18
TDP1-213ENST00000555880 CFAP58Q5T655 872 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 MEI1Q5TIA1 1274 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 FBXO11Q86XK2 927 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 C10orf67Q8IYJ2 551 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 LMBR1Q8WVP7 490 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 IFT81Q8WYA0 676 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 MKL1Q969V6 931 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 MS4A14Q96JA4 679 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 FAM20AQ96MK3 541 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 UIMC1Q96RL1 719 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 CAPS2Q9BXY5 557 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 FGFBP2Q9BYJ0 223 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 GANQ9H2C0 597 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 EHD2Q9NZN4 543 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 ADAMTS1Q9UHI8 967 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 TRAF3IP3Q9Y228 551 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 UCHL3P15374 230 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 NPR1P16066 1061 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 GAP43P17677 238 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 KLRC1P26715 233 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 ALDH1B1P30837 517 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 PDE6BP35913 854 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 ZNF76P36508 570 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 NOP2P46087 812 aaKnown RBP7.66□□□□□ -1.18
TDP1-213ENST00000555880 CRKP46108 304 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 RBM5P52756 815 aaKnown RBP eCLIP7.66□□□□□ -1.18
TDP1-213ENST00000555880 ICA1Q05084 483 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 TRAF1Q13077 416 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 PABPC4Q13310 644 aaKnown RBP eCLIP7.66□□□□□ -1.18
TDP1-213ENST00000555880 GIT2Q14161 759 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 ARSHQ5FYA8 562 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 DCAF17Q5H9S7 520 aaPredicted RBP7.66□□□□□ -1.18
TDP1-213ENST00000555880 TCERG1LQ5VWI1 586 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 APOBEC3HQ6NTF7 200 aaKnown RBP7.66□□□□□ -1.18
TDP1-213ENST00000555880 PAXIP1Q6ZW49 1069 aaPredicted RBP7.66□□□□□ -1.18
TDP1-213ENST00000555880 SFR1Q86XK3 245 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 CATSPER3Q86XQ3 398 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 KCTD17Q8N5Z5 321 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 SYT2Q8N9I0 419 aaPredicted RBP7.66□□□□□ -1.18
TDP1-213ENST00000555880 ETNPPLQ8TBG4 499 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 WHAMMQ8TF30 809 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.66□□□□□ -1.188e-7■■■■■ 32.1
TDP1-213ENST00000555880 PBKQ96KB5 322 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 KRT12Q99456 494 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 SH3GL2Q99962 352 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 REEP2Q9BRK0 252 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 EPB41L5Q9HCM4 733 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 GDF3Q9NR23 364 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 TYW1Q9NV66 732 aaKnown RBP7.66□□□□□ -1.18
TDP1-213ENST00000555880 PI4KBQ9UBF8 816 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 NFU1Q9UMS0 254 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 GOLGA6L10A6NI86 522 aa7.65□□□□□ -1.18
TDP1-213ENST00000555880 KCNK3O14649 394 aa7.65□□□□□ -1.18
TDP1-213ENST00000555880 MEIS2O14770 477 aa7.65□□□□□ -1.18
TDP1-213ENST00000555880 NR3C1P04150 777 aa7.65□□□□□ -1.18
TDP1-213ENST00000555880 SREBF1P36956 1147 aa7.65□□□□□ -1.18
TDP1-213ENST00000555880 MRPS25P82663 173 aaKnown RBP7.65□□□□□ -1.18
TDP1-213ENST00000555880 PTK2Q05397 1052 aa7.65□□□□□ -1.18
TDP1-213ENST00000555880 NFIAQ12857 509 aa7.65□□□□□ -1.18
TDP1-213ENST00000555880 USH1GQ495M9 461 aa7.65□□□□□ -1.18
TDP1-213ENST00000555880 TMEM179Q6ZVK1 233 aa7.65□□□□□ -1.18
TDP1-213ENST00000555880 COL23A1Q86Y22 540 aaPredicted RBP7.65□□□□□ -1.18
TDP1-213ENST00000555880 FMNL3Q8IVF7 1028 aa7.65□□□□□ -1.18
TDP1-213ENST00000555880 SYCE1Q8N0S2 351 aa7.65□□□□□ -1.18
TDP1-213ENST00000555880 USP38Q8NB14 1042 aa7.65□□□□□ -1.18
TDP1-213ENST00000555880 GMCL1Q96IK5 515 aa7.65□□□□□ -1.18
TDP1-213ENST00000555880 ZDHHC15Q96MV8 337 aa7.65□□□□□ -1.18
TDP1-213ENST00000555880 LCMT1Q9UIC8 334 aa7.65□□□□□ -1.18
TDP1-213ENST00000555880 RABGAP1Q9Y3P9 1069 aa7.65□□□□□ -1.18
TDP1-213ENST00000555880 ATP8B3O60423 1300 aa7.65□□□□□ -1.18
TDP1-213ENST00000555880 ANKRD31Q8N7Z5 1873 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 MEIS1O00470 390 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 EBAG9O00559 213 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 GCNT3O95395 438 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 GLI1P08151 1106 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 FERP16591 822 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 PON1P27169 355 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 IRAK1P51617 712 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 CASP5P51878 434 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 GNGT1P63211 74 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 SPIRE1Q08AE8 756 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 TCP10Q12799 353 aa7.64□□□□□ -1.19
TDP1-213ENST00000555880 CUL1Q13616 776 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms