RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 CLEC4DQ8WXI8 215 aa3.81□□□□□ -1.8
MTHFD1-212ENST00000555858 ASB15Q8WXK1 588 aa3.81□□□□□ -1.8
MTHFD1-212ENST00000555858 AUTS2Q8WXX7 1259 aa3.81□□□□□ -1.8
MTHFD1-212ENST00000555858 HPS3Q969F9 1004 aa3.81□□□□□ -1.8
MTHFD1-212ENST00000555858 FERMT2Q96AC1 680 aa3.81□□□□□ -1.8
MTHFD1-212ENST00000555858 EAF2Q96CJ1 260 aaPredicted RBP3.81□□□□□ -1.8
MTHFD1-212ENST00000555858 CCDC120Q96HB5 630 aa3.81□□□□□ -1.8
MTHFD1-212ENST00000555858 MAML3Q96JK9 1138 aa3.81□□□□□ -1.8
MTHFD1-212ENST00000555858 FAM193BQ96PV7 902 aaPredicted RBP3.81□□□□□ -1.8
MTHFD1-212ENST00000555858 STRBPQ96SI9 672 aaKnown RBP3.81□□□□□ -1.8
MTHFD1-212ENST00000555858 MAP3K14Q99558 947 aa3.81□□□□□ -1.8
MTHFD1-212ENST00000555858 ANO3Q9BYT9 981 aa3.81□□□□□ -1.8
MTHFD1-212ENST00000555858 SEMA4AQ9H3S1 761 aa3.81□□□□□ -1.8
MTHFD1-212ENST00000555858 POFUT1Q9H488 388 aa3.81□□□□□ -1.8
MTHFD1-212ENST00000555858 FAM204AQ9H8W3 233 aa3.81□□□□□ -1.8
MTHFD1-212ENST00000555858 SLAMF8Q9P0V8 285 aa3.81□□□□□ -1.8
MTHFD1-212ENST00000555858 EDARQ9UNE0 448 aa3.81□□□□□ -1.8
MTHFD1-212ENST00000555858 DNM3Q9UQ16 869 aa3.81□□□□□ -1.8
MTHFD1-212ENST00000555858 FAM50BQ9Y247 325 aa3.81□□□□□ -1.8
MTHFD1-212ENST00000555858 ASB1Q9Y576 335 aa3.81□□□□□ -1.8
MTHFD1-212ENST00000555858 ST20-MTHFSA0A0A6YYL1 179 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 TCRBV5S2A0A599 114 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 FITM1A5D6W6 292 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 ELL2O00472 640 aaPredicted RBP3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 SGSM2O43147 1006 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 MMEP08473 750 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 RHCEP18577 417 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 HTR3AP46098 478 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 USP14P54578 494 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 CYP4F8P98187 520 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 RHDQ02161 417 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 KIF23Q02241 960 aaPredicted RBP3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 MSMPQ1L6U9 139 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 MUM1Q2TAK8 710 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 PITRM1Q5JRX3 1037 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 TTC38Q5R3I4 469 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 ZBTB41Q5SVQ8 909 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 C10orf62Q5T681 223 aaPredicted RBP3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 BICRALQ6AI39 1079 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 RTN4RL1Q86UN2 441 aaPredicted RBP3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 SPICE1Q8N0Z3 855 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 THEMISQ8N1K5 641 aaPredicted RBP3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 OXR1Q8N573 874 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 HIPK4Q8NE63 616 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 PDZD8Q8NEN9 1154 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 DIS3LQ8TF46 1054 aaKnown RBP3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 ERCC4Q92889 916 aaPredicted RBP3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 FOXRED1Q96CU9 486 aaPredicted RBP3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 PKNOX2Q96KN3 472 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 GBP4Q96PP9 640 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 ELAC2Q9BQ52 826 aaKnown RBP3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 PLCD4Q9BRC7 762 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 GTPBP4Q9BZE4 634 aaKnown RBP3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 BSDC1Q9NW68 430 aaPredicted RBP3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 BCCIPQ9P287 314 aaKnown RBP eCLIP3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 TAGLN3Q9UI15 199 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 TUBD1Q9UJT1 453 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 NUDT5Q9UKK9 219 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 PALD1Q9ULE6 856 aa3.8□□□□□ -1.8
MTHFD1-212ENST00000555858 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 PRSS38A1L453 326 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 NOTOA8MTQ0 251 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 GOLGA6L22H0YM25 854 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 ACOT7O00154 380 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 TPP1O14773 563 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 PMM2O15305 246 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 DTNBO60941 627 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 PRPF6O94906 941 aaKnown RBP3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 ZBED1O96006 694 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 PRLP01236 227 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 HRGP04196 525 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 LPLP06858 475 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 HOXA10P31260 410 aaPredicted RBP3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 CD96P40200 585 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 HK2P52789 917 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 SLC16A1P53985 500 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 GJA9P57773 515 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 ZNF280AP59817 542 aaPredicted RBP3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 BNIP3Q12983 259 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 NR0B2Q15466 257 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 ZRSR2Q15696 482 aaKnown RBP3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 UAP1L1Q3KQV9 507 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 PAN2Q504Q3 1202 aaKnown RBP3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 PRAMEF9Q5VWM5 478 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 MBNL2Q5VZF2 373 aaKnown RBP3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 KIAA1841Q6NSI8 718 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 USP45Q70EL2 814 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 MILR1Q7Z6M3 343 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 MORC1Q86VD1 984 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 CILP2Q8IUL8 1156 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 GRAMD1CQ8IYS0 662 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 ZBTB34Q8NCN2 500 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 BCL7CQ8WUZ0 217 aaPredicted RBP3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 RSAD2Q8WXG1 361 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 C1GALT1C1Q96EU7 318 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 MVB12AQ96EY5 273 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 PEX11GQ96HA9 241 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 SLC2A13Q96QE2 648 aa3.79□□□□□ -1.8
MTHFD1-212ENST00000555858 TUBGCP5Q96RT8 1024 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms