RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 C7orf31Q8N865 590 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 LARP4BQ92615 738 aaKnown RBP13.9□□□□□ -0.18
SHMT2-221ENST00000555773 VTI1AQ96AJ9 217 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 CEP170P1Q96L14 293 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 CCDC43Q96MW1 224 aaKnown RBP13.9□□□□□ -0.18
SHMT2-221ENST00000555773 BHMT2Q9H2M3 363 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 CYP26B1Q9NR63 512 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 BLOC1S4Q9NUP1 217 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 KCND2Q9NZV8 630 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 TCHHQ07283 1943 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 MYH15Q9Y2K3 1946 aa13.9□□□□□ -0.18
SHMT2-221ENST00000555773 COL1A2P08123 1366 aa13.89□□□□□ -0.19
SHMT2-221ENST00000555773 A0A087WWV3 80 aa13.89□□□□□ -0.19
SHMT2-221ENST00000555773 ARHGEF35A5YM69 484 aa13.89□□□□□ -0.19
SHMT2-221ENST00000555773 MAGEB2O15479 319 aa13.89□□□□□ -0.19
SHMT2-221ENST00000555773 INSRRP14616 1297 aa13.89□□□□□ -0.19
SHMT2-221ENST00000555773 RFC5P40937 340 aa13.89□□□□□ -0.19
SHMT2-221ENST00000555773 SLC12A3P55017 1021 aa13.89□□□□□ -0.19
SHMT2-221ENST00000555773 ITGA7Q13683 1181 aa13.89□□□□□ -0.19
SHMT2-221ENST00000555773 SKOR2Q2VWA4 1001 aaPredicted RBP13.89□□□□□ -0.19
SHMT2-221ENST00000555773 NBPF20Q3BBV1 942 aa13.89□□□□□ -0.19
SHMT2-221ENST00000555773 COL13A1Q5TAT6 717 aaPredicted RBP13.89□□□□□ -0.19
SHMT2-221ENST00000555773 KRBA2Q6ZNG9 492 aa13.89□□□□□ -0.19
SHMT2-221ENST00000555773 TRMT1LQ7Z2T5 733 aaKnown RBP13.89□□□□□ -0.19
SHMT2-221ENST00000555773 CNNM3Q8NE01 707 aa13.89□□□□□ -0.19
SHMT2-221ENST00000555773 JPH2Q9BR39 696 aaPredicted RBP13.89□□□□□ -0.19
SHMT2-221ENST00000555773 TNMDQ9H2S6 317 aa13.89□□□□□ -0.19
SHMT2-221ENST00000555773 STARD7Q9NQZ5 370 aa13.89□□□□□ -0.19
SHMT2-221ENST00000555773 BMP2KQ9NSY1 1161 aaPredicted RBP13.89□□□□□ -0.19
SHMT2-221ENST00000555773 KBTBD4Q9NVX7 518 aa13.89□□□□□ -0.19
SHMT2-221ENST00000555773 SEPT9Q9UHD8 586 aaPredicted RBP13.89□□□□□ -0.19
SHMT2-221ENST00000555773 SERTAD1Q9UHV2 236 aa13.89□□□□□ -0.19
SHMT2-221ENST00000555773 CENPFP49454 3210 aa13.88□□□□□ -0.19
SHMT2-221ENST00000555773 A0A0U1RQG5 324 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-221ENST00000555773 A0A1W2PQ45 241 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-221ENST00000555773 A0A1W2PQY0 241 aa13.88□□□□□ -0.19
SHMT2-221ENST00000555773 ACTN4O43707 911 aaKnown RBP13.88□□□□□ -0.19
SHMT2-221ENST00000555773 KINO60870 393 aaKnown RBP13.88□□□□□ -0.19
SHMT2-221ENST00000555773 NR1I2O75469 434 aa13.88□□□□□ -0.19
SHMT2-221ENST00000555773 DGAT1O75907 488 aa13.88□□□□□ -0.19
SHMT2-221ENST00000555773 MYL1P05976 194 aa13.88□□□□□ -0.19
SHMT2-221ENST00000555773 SMIM10L2AP0DMW4 78 aa13.88□□□□□ -0.19
SHMT2-221ENST00000555773 SMIM10L2BP0DMW5 78 aa13.88□□□□□ -0.19
SHMT2-221ENST00000555773 MNX1P50219 401 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-221ENST00000555773 NPEPPSP55786 919 aa13.88□□□□□ -0.19
SHMT2-221ENST00000555773 PPFIA1Q13136 1202 aa13.88□□□□□ -0.19
SHMT2-221ENST00000555773 MCM6Q14566 821 aa13.88□□□□□ -0.19
SHMT2-221ENST00000555773 PADI6Q6TGC4 694 aa13.88□□□□□ -0.19
SHMT2-221ENST00000555773 SLC43A3Q8NBI5 491 aa13.88□□□□□ -0.19
SHMT2-221ENST00000555773 CEP89Q96ST8 783 aa13.88□□□□□ -0.19
SHMT2-221ENST00000555773 TIPINQ9BVW5 301 aa13.88□□□□□ -0.19
SHMT2-221ENST00000555773 DACT1Q9NYF0 836 aa13.88□□□□□ -0.19
SHMT2-221ENST00000555773 HOOK1Q9UJC3 728 aaKnown RBP13.88□□□□□ -0.19
SHMT2-221ENST00000555773 C17orf102A2RUQ5 167 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 ZBTB42B2RXF5 422 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 ARVCFO00192 962 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 GAS2O43903 313 aaKnown RBP13.87□□□□□ -0.19
SHMT2-221ENST00000555773 MAFO75444 373 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-221ENST00000555773 SSBP05455 408 aaKnown RBP eCLIP13.87□□□□□ -0.19
SHMT2-221ENST00000555773 CYP11B2P19099 503 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 HOXC8P31273 242 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 CHMP4BP1P59074 171 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 TBC1D8BQ0IIM8 1120 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 NFKBIBQ15653 356 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 GRIK4Q16099 956 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 MTERF2Q49AM1 385 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 PLA2G4FQ68DD2 849 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 RINT1Q6NUQ1 792 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 CNNM4Q6P4Q7 775 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 C1orf186Q6ZWK4 172 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 SH3RF1Q7Z6J0 888 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 RETREG2Q8NC44 543 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 LRRC15Q8TF66 581 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 SLC7A3Q8WY07 619 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 PAGE5Q96GU1 130 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 DHX33Q9H6R0 707 aaKnown RBP13.87□□□□□ -0.19
SHMT2-221ENST00000555773 PDLIM7Q9NR12 457 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 SETD4Q9NVD3 440 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 HDAC6Q9UBN7 1215 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 GTF2IRD1Q9UHL9 959 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 GRIN2DO15399 1336 aa13.87□□□□□ -0.19
SHMT2-221ENST00000555773 IGKV6-21A0A0C4DH24 114 aa13.86□□□□□ -0.19
SHMT2-221ENST00000555773 MBLAC1A4D2B0 266 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-221ENST00000555773 TMEM150BA6NC51 233 aa13.86□□□□□ -0.19
SHMT2-221ENST00000555773 COL6A1P12109 1028 aa13.86□□□□□ -0.19
SHMT2-221ENST00000555773 GUCY2CP25092 1073 aa13.86□□□□□ -0.19
SHMT2-221ENST00000555773 KLRC1P26715 233 aa13.86□□□□□ -0.19
SHMT2-221ENST00000555773 POLGP54098 1239 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-221ENST00000555773 ADAM17P78536 824 aa13.86□□□□□ -0.19
SHMT2-221ENST00000555773 DHX8Q14562 1220 aaKnown RBP13.86□□□□□ -0.19
SHMT2-221ENST00000555773 C1orf53Q5VUE5 145 aa13.86□□□□□ -0.19
SHMT2-221ENST00000555773 MTHFD1LQ6UB35 978 aa13.86□□□□□ -0.19
SHMT2-221ENST00000555773 NECAB2Q7Z6G3 386 aa13.86□□□□□ -0.19
SHMT2-221ENST00000555773 GPBP1Q86WP2 473 aa13.86□□□□□ -0.19
SHMT2-221ENST00000555773 MCPH1Q8NEM0 835 aa13.86□□□□□ -0.19
SHMT2-221ENST00000555773 GPT2Q8TD30 523 aa13.86□□□□□ -0.19
SHMT2-221ENST00000555773 C7orf25Q9BPX7 421 aa13.86□□□□□ -0.19
SHMT2-221ENST00000555773 SENP6Q9GZR1 1112 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-221ENST00000555773 KIAA0100Q14667 2235 aaKnown RBP13.86□□□□□ -0.19
SHMT2-221ENST00000555773 GTPBP6O43824 516 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms