RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 RFXAPO00287 272 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 UPP2O95045 317 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 TDP2O95551 362 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 GCFC2P16383 781 aaKnown RBP9.84□□□□□ -0.83
ACTN1-213ENST00000554508 CD52P31358 61 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 TMEM62Q0P6H9 643 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 GRB10Q13322 594 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 CCDC85BQ15834 202 aaPredicted RBP9.84□□□□□ -0.83
ACTN1-213ENST00000554508 B3GNT9Q6UX72 402 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 MIER3Q7Z3K6 550 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 NEK8Q86SG6 692 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 KIAA0319LQ8IZA0 1049 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 NECAB1Q8N987 351 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 ATXN2LQ8WWM7 1075 aaKnown RBP9.84□□□□□ -0.83
ACTN1-213ENST00000554508 SYMPKQ92797 1274 aaKnown RBP9.84□□□□□ -0.83
ACTN1-213ENST00000554508 ZBTB10Q96DT7 871 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 FAM20AQ96MK3 541 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 YME1L1Q96TA2 773 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 UNC45AQ9H3U1 944 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 BRMS1Q9HCU9 246 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 RNF216Q9NWF9 866 aaPredicted RBP9.84□□□□□ -0.83
ACTN1-213ENST00000554508 DDX25Q9UHL0 483 aaKnown RBP9.84□□□□□ -0.83
ACTN1-213ENST00000554508 PADI3Q9ULW8 664 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 TRANK1O15050 2925 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 A0A0C4DFX4 3053 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 COL4A4P53420 1690 aaPredicted RBP9.83□□□□□ -0.84
ACTN1-213ENST00000554508 COL4A6Q14031 1691 aa9.83□□□□□ -0.84
ACTN1-213ENST00000554508 SPTBN5Q9NRC6 3674 aaKnown RBP9.83□□□□□ -0.84
ACTN1-213ENST00000554508 TBX3O15119 743 aa9.83□□□□□ -0.84
ACTN1-213ENST00000554508 CHMP2AO43633 222 aa9.83□□□□□ -0.84
ACTN1-213ENST00000554508 RPS6KA5O75582 802 aa9.83□□□□□ -0.84
ACTN1-213ENST00000554508 LARGE1O95461 756 aa9.83□□□□□ -0.84
ACTN1-213ENST00000554508 C22orf31O95567 290 aa9.83□□□□□ -0.84
ACTN1-213ENST00000554508 OATP04181 439 aa9.83□□□□□ -0.84
ACTN1-213ENST00000554508 FDPSP14324 419 aaKnown RBP9.83□□□□□ -0.84
ACTN1-213ENST00000554508 TMOD1P28289 359 aa9.83□□□□□ -0.84
ACTN1-213ENST00000554508 KRT2P35908 639 aa9.83□□□□□ -0.84
ACTN1-213ENST00000554508 PAK2Q13177 524 aa9.83□□□□□ -0.84
ACTN1-213ENST00000554508 LETM2Q2VYF4 491 aa9.83□□□□□ -0.84
ACTN1-213ENST00000554508 METTL13Q8N6R0 699 aa9.83□□□□□ -0.84
ACTN1-213ENST00000554508 NSUN7Q8NE18 718 aaKnown RBP9.83□□□□□ -0.84
ACTN1-213ENST00000554508 ETNPPLQ8TBG4 499 aa9.83□□□□□ -0.84
ACTN1-213ENST00000554508 BACH2Q9BYV9 841 aa9.83□□□□□ -0.84
ACTN1-213ENST00000554508 AGO3Q9H9G7 860 aaKnown RBP9.83□□□□□ -0.84
ACTN1-213ENST00000554508 SUGCTQ9HAC7 445 aa9.83□□□□□ -0.84
ACTN1-213ENST00000554508 THEGQ9P2T0 379 aa9.83□□□□□ -0.84
ACTN1-213ENST00000554508 CUL9Q8IWT3 2517 aa9.83□□□□□ -0.84
ACTN1-213ENST00000554508 GPR182O15218 404 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 ZNF862O60290 1169 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 CCNT1O60563 726 aaKnown RBP9.82□□□□□ -0.84
ACTN1-213ENST00000554508 LPXNO60711 386 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 DKC1O60832 514 aaKnown RBP eCLIP9.82□□□□□ -0.841e-7■■■■■ 54.2
ACTN1-213ENST00000554508 BAG4O95429 457 aaKnown RBP9.82□□□□□ -0.84
ACTN1-213ENST00000554508 STAG3L1P0CL83 205 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 CRYBB1P53674 252 aaPredicted RBP9.82□□□□□ -0.84
ACTN1-213ENST00000554508 CDC42EP1Q00587 391 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 PRKCEQ02156 737 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 TRIM29Q14134 588 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 XKR3Q5GH77 459 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 EFCAB12Q6NXP0 572 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 PIK3AP1Q6ZUJ8 805 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 TRMT1LQ7Z2T5 733 aaKnown RBP9.82□□□□□ -0.84
ACTN1-213ENST00000554508 SPRED2Q7Z698 418 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 RTN4RL1Q86UN2 441 aaPredicted RBP9.82□□□□□ -0.84
ACTN1-213ENST00000554508 MICALL1Q8N3F8 863 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 FIBCD1Q8N539 461 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 FBXO22Q8NEZ5 403 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 OXER1Q8TDS5 423 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 GJA10Q969M2 543 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 ZSCAN31Q96LW9 406 aaPredicted RBP9.82□□□□□ -0.84
ACTN1-213ENST00000554508 MAP7D2Q96T17 732 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 COL25A1Q9BXS0 654 aaPredicted RBP9.82□□□□□ -0.84
ACTN1-213ENST00000554508 NIFKQ9BYG3 293 aaKnown RBP9.82□□□□□ -0.84
ACTN1-213ENST00000554508 KCNMB3Q9NPA1 279 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 GJB4Q9NTQ9 266 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 LIMCH1Q9UPQ0 1083 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 NOC2LQ9Y3T9 749 aaKnown RBP9.82□□□□□ -0.84
ACTN1-213ENST00000554508 RWDD3Q9Y3V2 267 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 FNDC1Q4ZHG4 1894 aaPredicted RBP9.82□□□□□ -0.84
ACTN1-213ENST00000554508 NCOR1O75376 2440 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 BRWD1Q9NSI6 2320 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 MYO7AQ13402 2215 aa9.82□□□□□ -0.84
ACTN1-213ENST00000554508 TCF20Q9UGU0 1960 aaKnown RBP9.81□□□□□ -0.84
ACTN1-213ENST00000554508 SLC37A4O43826 429 aa9.81□□□□□ -0.84
ACTN1-213ENST00000554508 MARCH6O60337 910 aa9.81□□□□□ -0.84
ACTN1-213ENST00000554508 GPR32O75388 356 aa9.81□□□□□ -0.84
ACTN1-213ENST00000554508 MMP1P03956 469 aa9.81□□□□□ -0.84
ACTN1-213ENST00000554508 RB1P06400 928 aa9.81□□□□□ -0.84
ACTN1-213ENST00000554508 PSMC5P62195 406 aa9.81□□□□□ -0.84
ACTN1-213ENST00000554508 MRPS5P82675 430 aaKnown RBP9.81□□□□□ -0.84
ACTN1-213ENST00000554508 TBC1D8BQ0IIM8 1120 aa9.81□□□□□ -0.84
ACTN1-213ENST00000554508 NFX1Q12986 1120 aaKnown RBP9.81□□□□□ -0.84
ACTN1-213ENST00000554508 PPP2R5CQ13362 524 aa9.81□□□□□ -0.84
ACTN1-213ENST00000554508 TARBP2Q15633 366 aaKnown RBP9.81□□□□□ -0.84
ACTN1-213ENST00000554508 EPC2Q52LR7 807 aa9.81□□□□□ -0.84
ACTN1-213ENST00000554508 TJAP1Q5JTD0 557 aa9.81□□□□□ -0.84
ACTN1-213ENST00000554508 NPAS4Q8IUM7 802 aa9.81□□□□□ -0.84
ACTN1-213ENST00000554508 TMEM192Q8IY95 271 aa9.81□□□□□ -0.84
ACTN1-213ENST00000554508 SLFN12Q8IYM2 578 aa9.81□□□□□ -0.84
ACTN1-213ENST00000554508 LINC01465Q8N7H1 131 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms