RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 GPR162Q16538 588 aa5.41□□□□□ -1.54
ATXN3-227ENST00000554491 INF2Q27J81 1249 aa5.41□□□□□ -1.54
ATXN3-227ENST00000554491 NBPF6Q5VWK0 638 aa5.41□□□□□ -1.54
ATXN3-227ENST00000554491 CD300LDQ6UXZ3 194 aa5.41□□□□□ -1.54
ATXN3-227ENST00000554491 ETV3LQ6ZN32 361 aa5.41□□□□□ -1.54
ATXN3-227ENST00000554491 NBPF5PQ86XG9 351 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-227ENST00000554491 FAM169BQ8N8A8 192 aa5.41□□□□□ -1.54
ATXN3-227ENST00000554491 ZNF428Q96B54 188 aa5.41□□□□□ -1.54
ATXN3-227ENST00000554491 NBPF4Q96M43 638 aa5.41□□□□□ -1.54
ATXN3-227ENST00000554491 MTFR1LQ9H019 292 aa5.41□□□□□ -1.54
ATXN3-227ENST00000554491 EMC9Q9Y3B6 208 aa5.41□□□□□ -1.54
ATXN3-227ENST00000554491 SPATA31A1Q5TZJ5 1347 aa5.41□□□□□ -1.54
ATXN3-227ENST00000554491 ATP7BP35670 1465 aa5.4□□□□□ -1.54
ATXN3-227ENST00000554491 TULP4Q9NRJ4 1543 aa5.4□□□□□ -1.54
ATXN3-227ENST00000554491 LOC102724159A0A0B4J2E5 919 aa5.4□□□□□ -1.54
ATXN3-227ENST00000554491 ANKRD34BA5PLL1 514 aa5.4□□□□□ -1.54
ATXN3-227ENST00000554491 SCAMP3O14828 347 aaKnown RBP5.4□□□□□ -1.54
ATXN3-227ENST00000554491 RPL13P26373 211 aaKnown RBP5.4□□□□□ -1.54
ATXN3-227ENST00000554491 NASPP49321 788 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-227ENST00000554491 CYP4F3Q08477 520 aa5.4□□□□□ -1.54
ATXN3-227ENST00000554491 HDAC1Q13547 482 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-227ENST00000554491 PWP2Q15269 919 aaKnown RBP5.4□□□□□ -1.54
ATXN3-227ENST00000554491 C9orf131Q5VYM1 1079 aa5.4□□□□□ -1.54
ATXN3-227ENST00000554491 MCTP2Q6DN12 878 aa5.4□□□□□ -1.54
ATXN3-227ENST00000554491 VHLLQ6RSH7 139 aa5.4□□□□□ -1.54
ATXN3-227ENST00000554491 KRT28Q7Z3Y7 464 aa5.4□□□□□ -1.54
ATXN3-227ENST00000554491 MIB1Q86YT6 1006 aa5.4□□□□□ -1.54
ATXN3-227ENST00000554491 DCP2Q8IU60 420 aaKnown RBP5.4□□□□□ -1.54
ATXN3-227ENST00000554491 OR6P1Q8NGX9 317 aa5.4□□□□□ -1.54
ATXN3-227ENST00000554491 RASGRP4Q8TDF6 673 aa5.4□□□□□ -1.54
ATXN3-227ENST00000554491 SPATA32Q96LK8 384 aa5.4□□□□□ -1.54
ATXN3-227ENST00000554491 C8orf49Q96NF6 230 aa5.4□□□□□ -1.54
ATXN3-227ENST00000554491 MMP19Q99542 508 aa5.4□□□□□ -1.54
ATXN3-227ENST00000554491 TSPYL1Q9H0U9 437 aa5.4□□□□□ -1.54
ATXN3-227ENST00000554491 INVSQ9Y283 1065 aa5.4□□□□□ -1.54
ATXN3-227ENST00000554491 GOLGB1Q14789 3259 aaKnown RBP5.4□□□□□ -1.55
ATXN3-227ENST00000554491 SSH2Q76I76 1423 aa5.4□□□□□ -1.55
ATXN3-227ENST00000554491 C22orf46C9J442 243 aa5.39□□□□□ -1.55
ATXN3-227ENST00000554491 MATN3O15232 486 aa5.39□□□□□ -1.55
ATXN3-227ENST00000554491 PLATP00750 562 aa5.39□□□□□ -1.55
ATXN3-227ENST00000554491 FPR2P25090 351 aa5.39□□□□□ -1.55
ATXN3-227ENST00000554491 STAT5AP42229 794 aa5.39□□□□□ -1.55
ATXN3-227ENST00000554491 CASP7P55210 303 aa5.39□□□□□ -1.55
ATXN3-227ENST00000554491 ITGA1P56199 1179 aa5.39□□□□□ -1.55
ATXN3-227ENST00000554491 MYBPC2Q14324 1141 aa5.39□□□□□ -1.55
ATXN3-227ENST00000554491 KYQ8NBH2 561 aa5.39□□□□□ -1.55
ATXN3-227ENST00000554491 FRS2Q8WU20 508 aa5.39□□□□□ -1.55
ATXN3-227ENST00000554491 SGSM3Q96HU1 749 aa5.39□□□□□ -1.55
ATXN3-227ENST00000554491 LOXL4Q96JB6 756 aa5.39□□□□□ -1.55
ATXN3-227ENST00000554491 TSPAN18Q96SJ8 248 aa5.39□□□□□ -1.55
ATXN3-227ENST00000554491 AP5M1Q9H0R1 490 aa5.39□□□□□ -1.55
ATXN3-227ENST00000554491 RRAGDQ9NQL2 400 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-227ENST00000554491 RIPOR2Q9Y4F9 1068 aa5.39□□□□□ -1.55
ATXN3-227ENST00000554491 NHSQ6T4R5 1651 aa5.39□□□□□ -1.55
ATXN3-227ENST00000554491 TNS2Q63HR2 1409 aa5.39□□□□□ -1.55
ATXN3-227ENST00000554491 ITSN1Q15811 1721 aa5.38□□□□□ -1.55
ATXN3-227ENST00000554491 ARNTLO00327 626 aa5.38□□□□□ -1.55
ATXN3-227ENST00000554491 DDX3XO00571 662 aaKnown RBP eCLIP5.38□□□□□ -1.55
ATXN3-227ENST00000554491 AKAP8O43823 692 aaKnown RBP5.38□□□□□ -1.55
ATXN3-227ENST00000554491 ZNF500O60304 480 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-227ENST00000554491 ZNF20P17024 532 aa5.38□□□□□ -1.55
ATXN3-227ENST00000554491 ZXDAP98168 799 aa5.38□□□□□ -1.55
ATXN3-227ENST00000554491 LMOD3Q0VAK6 560 aa5.38□□□□□ -1.55
ATXN3-227ENST00000554491 PRR31Q5SQ13 230 aa5.38□□□□□ -1.55
ATXN3-227ENST00000554491 CPZQ66K79 652 aa5.38□□□□□ -1.55
ATXN3-227ENST00000554491 GTF2IRD2BQ6EKJ0 949 aa5.38□□□□□ -1.55
ATXN3-227ENST00000554491 GTF2IRD2Q86UP8 949 aa5.38□□□□□ -1.55
ATXN3-227ENST00000554491 BVESQ8NE79 360 aa5.38□□□□□ -1.55
ATXN3-227ENST00000554491 SSBP3Q9BWW4 388 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-227ENST00000554491 FEZ2Q9UHY8 353 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-227ENST00000554491 ZHX1Q9UKY1 873 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-227ENST00000554491 DHX57Q6P158 1386 aaKnown RBP5.38□□□□□ -1.55
ATXN3-227ENST00000554491 AATKQ6ZMQ8 1374 aa5.38□□□□□ -1.55
ATXN3-227ENST00000554491 PIK3C2AO00443 1686 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 KIAA1210Q9ULL0 1709 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 MROH6A6NGR9 719 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 E9PSI1 815 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 PLSCR1O15162 318 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 ANP32CO43423 234 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 TBX1O43435 398 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 GJA8P48165 433 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 FAM26FQ5R3K3 315 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 L1TD1Q5T7N2 865 aaKnown RBP5.37□□□□□ -1.55
ATXN3-227ENST00000554491 LIMS2Q7Z4I7 341 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 MILR1Q7Z6M3 343 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 CCDC103Q8IW40 242 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 TRIM59Q8IWR1 403 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 LGI4Q8N135 537 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 SDR16C5Q8N3Y7 309 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 DNAJC5GQ8N7S2 189 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 TXNDC5Q8NBS9 432 aaKnown RBP5.37□□□□□ -1.55
ATXN3-227ENST00000554491 NPLOC4Q8TAT6 608 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 CPLX3Q8WVH0 158 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 MRGPRX3Q96LB0 322 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 SAMD11Q96NU1 681 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 APBA2Q99767 749 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 STK32BQ9NY57 414 aa5.37□□□□□ -1.55
ATXN3-227ENST00000554491 TMEFF2Q9UIK5 374 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-227ENST00000554491 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-227ENST00000554491 PLEKHH1Q9ULM0 1364 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms