RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 SMCR8Q8TEV9 937 aaPredicted RBP16.11■□□□□ 0.17
PPP4R3A-201ENST00000554308 RMDN3Q96TC7 470 aa16.11■□□□□ 0.17
PPP4R3A-201ENST00000554308 POLR3CQ9BUI4 534 aaPredicted RBP16.11■□□□□ 0.17
PPP4R3A-201ENST00000554308 SELENOOQ9BVL4 669 aa16.11■□□□□ 0.17
PPP4R3A-201ENST00000554308 SAMM50Q9Y512 469 aa16.11■□□□□ 0.17
PPP4R3A-201ENST00000554308 PCDHA2Q9Y5H9 948 aa16.11■□□□□ 0.17
PPP4R3A-201ENST00000554308 MAGEA9P43362 315 aa16.11■□□□□ 0.17
PPP4R3A-201ENST00000554308 DNM2P50570 870 aa16.11■□□□□ 0.17
PPP4R3A-201ENST00000554308 MRPS9P82933 396 aaKnown RBP16.11■□□□□ 0.17
PPP4R3A-201ENST00000554308 PPP2R5CQ13362 524 aa16.11■□□□□ 0.17
PPP4R3A-201ENST00000554308 SNRNP48Q6IEG0 339 aaKnown RBP16.11■□□□□ 0.17
PPP4R3A-201ENST00000554308 BANK1Q8NDB2 785 aa16.11■□□□□ 0.17
PPP4R3A-201ENST00000554308 CAGE1Q8TC20 777 aa16.11■□□□□ 0.17
PPP4R3A-201ENST00000554308 HDAC7Q8WUI4 952 aa16.11■□□□□ 0.17
PPP4R3A-201ENST00000554308 SCFD1Q8WVM8 642 aa16.11■□□□□ 0.17
PPP4R3A-201ENST00000554308 SYT17Q9BSW7 474 aa16.11■□□□□ 0.17
PPP4R3A-201ENST00000554308 VIPAS39Q9H9C1 493 aa16.11■□□□□ 0.17
PPP4R3A-201ENST00000554308 WRAP73Q9P2S5 460 aaPredicted RBP16.11■□□□□ 0.17
PPP4R3A-201ENST00000554308 CAPN11Q9UMQ6 739 aa16.11■□□□□ 0.17
PPP4R3A-201ENST00000554308 TUBBP07437 444 aa16.1■□□□□ 0.17
PPP4R3A-201ENST00000554308 TRIM21P19474 475 aaKnown RBP16.1■□□□□ 0.17
PPP4R3A-201ENST00000554308 SETQ01105 290 aaPredicted RBP16.1■□□□□ 0.17
PPP4R3A-201ENST00000554308 LRRC63Q05C16 580 aa16.1■□□□□ 0.17
PPP4R3A-201ENST00000554308 MIIPQ5JXC2 388 aa16.1■□□□□ 0.17
PPP4R3A-201ENST00000554308 TEX2Q8IWB9 1127 aa16.1■□□□□ 0.17
PPP4R3A-201ENST00000554308 GOLGA6L1Q8N7Z2 621 aa16.1■□□□□ 0.17
PPP4R3A-201ENST00000554308 CNKSR2Q8WXI2 1034 aa16.1■□□□□ 0.17
PPP4R3A-201ENST00000554308 TSG101Q99816 390 aa16.1■□□□□ 0.17
PPP4R3A-201ENST00000554308 ADM5C9JUS6 153 aa16.1■□□□□ 0.17
PPP4R3A-201ENST00000554308 USP2O75604 605 aaPredicted RBP16.1■□□□□ 0.17
PPP4R3A-201ENST00000554308 CORO7P57737 925 aa16.1■□□□□ 0.17
PPP4R3A-201ENST00000554308 BAATQ14032 418 aaPredicted RBP16.1■□□□□ 0.17
PPP4R3A-201ENST00000554308 SFR1Q86XK3 245 aa16.1■□□□□ 0.17
PPP4R3A-201ENST00000554308 TEKT3Q9BXF9 490 aa16.1■□□□□ 0.17
PPP4R3A-201ENST00000554308 RNF146Q9NTX7 359 aa16.1■□□□□ 0.17
PPP4R3A-201ENST00000554308 MTMR1Q13613 665 aa16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 COG2Q14746 738 aa16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 KRT26Q7Z3Y9 468 aa16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 DRC1Q96MC2 740 aa16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 NHEJ1Q9H9Q4 299 aaPredicted RBP16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 SMARCAL1Q9NZC9 954 aa16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 TMOD4Q9NZQ9 345 aa16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 STK24Q9Y6E0 443 aa16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 PITPNM2Q9BZ72 1349 aa16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 TESPA1A2RU30 521 aaPredicted RBP16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 SLC26A4O43511 780 aa16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 PEX10O60683 326 aa16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 PPFIA4O75335 1185 aa16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 EYA4O95677 639 aa16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 PLEKP08567 350 aaPredicted RBP16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 YBX3P16989 372 aaKnown RBP eCLIP16.09■□□□□ 0.179e-9■□□□□ 9.1
PPP4R3A-201ENST00000554308 TKFCQ3LXA3 575 aa16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 ARHGEF16Q5VV41 709 aa16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 RINT1Q6NUQ1 792 aa16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 CCNI2Q6ZMN8 369 aaPredicted RBP16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 LRRC55Q6ZSA7 311 aa16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 SULF1Q8IWU6 871 aa16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 DCPSQ96C86 337 aaKnown RBP16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 JADE2Q9NQC1 790 aa16.09■□□□□ 0.17
PPP4R3A-201ENST00000554308 ZNF263O14978 683 aa16.08■□□□□ 0.17
PPP4R3A-201ENST00000554308 FKBP3Q00688 224 aaKnown RBP16.08■□□□□ 0.17
PPP4R3A-201ENST00000554308 VGLL4Q14135 290 aa16.08■□□□□ 0.17
PPP4R3A-201ENST00000554308 TMEM132BQ14DG7 1078 aa16.08■□□□□ 0.17
PPP4R3A-201ENST00000554308 TTC31Q49AM3 519 aaPredicted RBP16.08■□□□□ 0.17
PPP4R3A-201ENST00000554308 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.08■□□□□ 0.17
PPP4R3A-201ENST00000554308 SH2D3AQ9BRG2 576 aa16.08■□□□□ 0.17
PPP4R3A-201ENST00000554308 LXNQ9BS40 222 aa16.08■□□□□ 0.17
PPP4R3A-201ENST00000554308 EFCC1Q9HA90 598 aa16.08■□□□□ 0.17
PPP4R3A-201ENST00000554308 TUFT1Q9NNX1 390 aa16.08■□□□□ 0.17
PPP4R3A-201ENST00000554308 POLR2AP24928 1970 aaKnown RBP16.08■□□□□ 0.16
PPP4R3A-201ENST00000554308 C19orf81C9J6K1 198 aa16.08■□□□□ 0.16
PPP4R3A-201ENST00000554308 TBCAO75347 108 aaKnown RBP16.08■□□□□ 0.16
PPP4R3A-201ENST00000554308 FGFR1OPO95684 399 aaKnown RBP16.08■□□□□ 0.16
PPP4R3A-201ENST00000554308 ITGB3BPQ13352 177 aaPredicted RBP16.08■□□□□ 0.16
PPP4R3A-201ENST00000554308 PGM5Q15124 567 aa16.08■□□□□ 0.16
PPP4R3A-201ENST00000554308 TSR1Q2NL82 804 aaKnown RBP16.08■□□□□ 0.16
PPP4R3A-201ENST00000554308 PCNX4Q63HM2 1172 aa16.08■□□□□ 0.16
PPP4R3A-201ENST00000554308 TTC19Q6DKK2 380 aaPredicted RBP16.08■□□□□ 0.16
PPP4R3A-201ENST00000554308 MAEAQ7L5Y9 396 aa16.08■□□□□ 0.16
PPP4R3A-201ENST00000554308 CCDC155Q8N6L0 562 aa16.08■□□□□ 0.16
PPP4R3A-201ENST00000554308 CRACR2AQ9BSW2 395 aa16.08■□□□□ 0.16
PPP4R3A-201ENST00000554308 TTYH3Q9C0H2 523 aa16.08■□□□□ 0.16
PPP4R3A-201ENST00000554308 NDST4Q9H3R1 872 aa16.08■□□□□ 0.16
PPP4R3A-201ENST00000554308 ADARB2Q9NS39 739 aaKnown RBP16.08■□□□□ 0.16
PPP4R3A-201ENST00000554308 AFG3L2Q9Y4W6 797 aa16.08■□□□□ 0.16
PPP4R3A-201ENST00000554308 RPTORQ8N122 1335 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 SSC5DA1L4H1 1573 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 A0A1W2PQC6 194 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 FRMD3A2A2Y4 597 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 MYBP10242 640 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 DSG3P32926 999 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 KCNA1Q09470 495 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 MEA1Q16626 185 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 MAP9Q49MG5 647 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 VWA3BQ502W6 1294 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 ZCWPW2Q504Y3 356 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 FKBP15Q5T1M5 1219 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 C9orf131Q5VYM1 1079 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 MIER3Q7Z3K6 550 aa16.07■□□□□ 0.16
PPP4R3A-201ENST00000554308 PSMB7Q99436 277 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms