RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 STK24Q9Y6E0 443 aa16.61■□□□□ 0.25
MTHFD1-204ENST00000553405 IGKV6-21A0A0C4DH24 114 aa16.6■□□□□ 0.25
MTHFD1-204ENST00000553405 TREHO43280 583 aa16.6■□□□□ 0.25
MTHFD1-204ENST00000553405 DKC1O60832 514 aaKnown RBP eCLIP16.6■□□□□ 0.25
MTHFD1-204ENST00000553405 NCLP19338 710 aaKnown RBP16.6■□□□□ 0.25
MTHFD1-204ENST00000553405 ME1P48163 572 aa16.6■□□□□ 0.25
MTHFD1-204ENST00000553405 RARRES1P49788 294 aa16.6■□□□□ 0.25
MTHFD1-204ENST00000553405 CHMP4BP1P59074 171 aa16.6■□□□□ 0.25
MTHFD1-204ENST00000553405 MKRN4PQ13434 485 aaPredicted RBP16.6■□□□□ 0.25
MTHFD1-204ENST00000553405 KARSQ15046 597 aaKnown RBP16.6■□□□□ 0.25
MTHFD1-204ENST00000553405 ADALQ6DHV7 355 aa16.6■□□□□ 0.25
MTHFD1-204ENST00000553405 SH2D3AQ9BRG2 576 aa16.6■□□□□ 0.25
MTHFD1-204ENST00000553405 PDLIM7Q9NR12 457 aa16.6■□□□□ 0.25
MTHFD1-204ENST00000553405 NRBP2Q9NSY0 501 aa16.6■□□□□ 0.25
MTHFD1-204ENST00000553405 ANKEF1Q9NU02 776 aa16.6■□□□□ 0.25
MTHFD1-204ENST00000553405 DDX19AQ9NUU7 478 aaKnown RBP16.6■□□□□ 0.25
MTHFD1-204ENST00000553405 DBR1Q9UK59 544 aaKnown RBP16.6■□□□□ 0.25
MTHFD1-204ENST00000553405 KIAA1024Q9UPX6 916 aa16.6■□□□□ 0.25
MTHFD1-204ENST00000553405 KAT6AQ92794 2004 aa16.6■□□□□ 0.25
MTHFD1-204ENST00000553405 C17orf102A2RUQ5 167 aa16.59■□□□□ 0.25
MTHFD1-204ENST00000553405 RRN3P2A6NIE6 340 aa16.59■□□□□ 0.25
MTHFD1-204ENST00000553405 DDX11L8A8MPP1 907 aa16.59■□□□□ 0.25
MTHFD1-204ENST00000553405 PQBP1O60828 265 aaKnown RBP16.59■□□□□ 0.25
MTHFD1-204ENST00000553405 UBA7P41226 1012 aa16.59■□□□□ 0.25
MTHFD1-204ENST00000553405 E2F4Q16254 413 aa16.59■□□□□ 0.25
MTHFD1-204ENST00000553405 FAM47CQ5HY64 1035 aa16.59■□□□□ 0.25
MTHFD1-204ENST00000553405 MTHFD1LQ6UB35 978 aa16.59■□□□□ 0.25
MTHFD1-204ENST00000553405 RUFY4Q6ZNE9 571 aa16.59■□□□□ 0.25
MTHFD1-204ENST00000553405 CKAP2LQ8IYA6 745 aa16.59■□□□□ 0.25
MTHFD1-204ENST00000553405 KCTD17Q8N5Z5 321 aa16.59■□□□□ 0.25
MTHFD1-204ENST00000553405 NACC1Q96RE7 527 aa16.59■□□□□ 0.25
MTHFD1-204ENST00000553405 DHX33Q9H6R0 707 aaKnown RBP16.59■□□□□ 0.25
MTHFD1-204ENST00000553405 CYP26B1Q9NR63 512 aa16.59■□□□□ 0.25
MTHFD1-204ENST00000553405 SEPT9Q9UHD8 586 aaPredicted RBP16.59■□□□□ 0.25
MTHFD1-204ENST00000553405 HPSEQ9Y251 543 aa16.59■□□□□ 0.25
MTHFD1-204ENST00000553405 MROH7Q68CQ1 1323 aa16.59■□□□□ 0.25
MTHFD1-204ENST00000553405 KDM3AQ9Y4C1 1321 aa16.59■□□□□ 0.25
MTHFD1-204ENST00000553405 A0A1W2PQ27 194 aa16.58■□□□□ 0.24
MTHFD1-204ENST00000553405 A0A1W2PQ64 194 aa16.58■□□□□ 0.24
MTHFD1-204ENST00000553405 A0A1W2PQD8 194 aa16.58■□□□□ 0.24
MTHFD1-204ENST00000553405 E9PMD0 336 aa16.58■□□□□ 0.24
MTHFD1-204ENST00000553405 MAFO75444 373 aaPredicted RBP16.58■□□□□ 0.24
MTHFD1-204ENST00000553405 PLCG1P19174 1290 aa16.58■□□□□ 0.24
MTHFD1-204ENST00000553405 CMA1P23946 247 aa16.58■□□□□ 0.24
MTHFD1-204ENST00000553405 RBL2Q08999 1139 aa16.58■□□□□ 0.24
MTHFD1-204ENST00000553405 PTGISQ16647 500 aa16.58■□□□□ 0.24
MTHFD1-204ENST00000553405 TRAF7Q6Q0C0 670 aa16.58■□□□□ 0.24
MTHFD1-204ENST00000553405 TRMT1LQ7Z2T5 733 aaKnown RBP16.58■□□□□ 0.24
MTHFD1-204ENST00000553405 SH3RF1Q7Z6J0 888 aa16.58■□□□□ 0.24
MTHFD1-204ENST00000553405 XPNPEP1Q9NQW7 623 aa16.58■□□□□ 0.24
MTHFD1-204ENST00000553405 TUBE1Q9UJT0 475 aa16.58■□□□□ 0.24
MTHFD1-204ENST00000553405 ATP11BQ9Y2G3 1177 aa16.58■□□□□ 0.24
MTHFD1-204ENST00000553405 PPME1Q9Y570 386 aa16.58■□□□□ 0.24
MTHFD1-204ENST00000553405 PCDHA2Q9Y5H9 948 aa16.58■□□□□ 0.24
MTHFD1-204ENST00000553405 LOXHD1Q8IVV2 1947 aa16.58■□□□□ 0.24
MTHFD1-204ENST00000553405 CEP290O15078 2479 aa16.58■□□□□ 0.24
MTHFD1-204ENST00000553405 EYA4O95677 639 aa16.57■□□□□ 0.24
MTHFD1-204ENST00000553405 CYP2C9P11712 490 aa16.57■□□□□ 0.24
MTHFD1-204ENST00000553405 KLRC1P26715 233 aa16.57■□□□□ 0.24
MTHFD1-204ENST00000553405 IGBP1P78318 339 aa16.57■□□□□ 0.24
MTHFD1-204ENST00000553405 MTERF2Q49AM1 385 aa16.57■□□□□ 0.24
MTHFD1-204ENST00000553405 RPAINQ86UA6 219 aa16.57■□□□□ 0.24
MTHFD1-204ENST00000553405 PLIN2Q99541 437 aa16.57■□□□□ 0.24
MTHFD1-204ENST00000553405 NT5C3AQ9H0P0 336 aa16.57■□□□□ 0.24
MTHFD1-204ENST00000553405 GOLPH3LQ9H4A5 285 aa16.57■□□□□ 0.24
MTHFD1-204ENST00000553405 EVPLQ92817 2033 aa16.57■□□□□ 0.24
MTHFD1-204ENST00000553405 SIP14410 1827 aa16.56■□□□□ 0.24
MTHFD1-204ENST00000553405 TRIM43BA6NCK2 446 aa16.56■□□□□ 0.24
MTHFD1-204ENST00000553405 KIAA0355O15063 1070 aa16.56■□□□□ 0.24
MTHFD1-204ENST00000553405 GNAT1P11488 350 aa16.56■□□□□ 0.24
MTHFD1-204ENST00000553405 ITGB8P26012 769 aa16.56■□□□□ 0.24
MTHFD1-204ENST00000553405 SLC12A3P55017 1021 aa16.56■□□□□ 0.24
MTHFD1-204ENST00000553405 PTK7Q13308 1070 aa16.56■□□□□ 0.24
MTHFD1-204ENST00000553405 DRP2Q13474 957 aa16.56■□□□□ 0.24
MTHFD1-204ENST00000553405 XKR9Q5GH70 373 aa16.56■□□□□ 0.24
MTHFD1-204ENST00000553405 KIAA0319LQ8IZA0 1049 aa16.56■□□□□ 0.24
MTHFD1-204ENST00000553405 TRIM43Q96BQ3 446 aaPredicted RBP16.56■□□□□ 0.24
MTHFD1-204ENST00000553405 CEP170P1Q96L14 293 aa16.56■□□□□ 0.24
MTHFD1-204ENST00000553405 NOC4LQ9BVI4 516 aaKnown RBP16.56■□□□□ 0.24
MTHFD1-204ENST00000553405 BHMT2Q9H2M3 363 aa16.56■□□□□ 0.24
MTHFD1-204ENST00000553405 PCDH10Q9P2E7 1040 aa16.56■□□□□ 0.24
MTHFD1-204ENST00000553405 LTBP2Q14767 1821 aa16.56■□□□□ 0.24
MTHFD1-204ENST00000553405 UMODL1Q5DID0 1318 aa16.55■□□□□ 0.24
MTHFD1-204ENST00000553405 SMIM35A0A1B0GVV1 85 aa16.55■□□□□ 0.24
MTHFD1-204ENST00000553405 DCDC2CA8MYV0 355 aa16.55■□□□□ 0.24
MTHFD1-204ENST00000553405 RBAK-RBAKDNI3L0D1 243 aa16.55■□□□□ 0.24
MTHFD1-204ENST00000553405 GADD45BO75293 160 aaPredicted RBP16.55■□□□□ 0.24
MTHFD1-204ENST00000553405 CLTBP09497 229 aa16.55■□□□□ 0.24
MTHFD1-204ENST00000553405 PFKFB1P16118 471 aa16.55■□□□□ 0.24
MTHFD1-204ENST00000553405 ARSHQ5FYA8 562 aa16.55■□□□□ 0.24
MTHFD1-204ENST00000553405 OTUD6AQ7L8S5 288 aa16.55■□□□□ 0.24
MTHFD1-204ENST00000553405 RAD54LQ92698 747 aa16.55■□□□□ 0.24
MTHFD1-204ENST00000553405 VWCEQ96DN2 955 aa16.55■□□□□ 0.24
MTHFD1-204ENST00000553405 CALML4Q96GE6 196 aa16.55■□□□□ 0.24
MTHFD1-204ENST00000553405 MTRQ99707 1265 aa16.55■□□□□ 0.24
MTHFD1-204ENST00000553405 HTATIP2Q9BUP3 242 aa16.55■□□□□ 0.24
MTHFD1-204ENST00000553405 RUSC1Q9BVN2 902 aa16.55■□□□□ 0.24
MTHFD1-204ENST00000553405 DNM3Q9UQ16 869 aa16.55■□□□□ 0.24
MTHFD1-204ENST00000553405 RANBP2P49792 3224 aaKnown RBP16.55■□□□□ 0.24
MTHFD1-204ENST00000553405 PDE4DIPQ5VU43 2346 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms