RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 USP40Q9NVE5 1235 aa7.11□□□□□ -1.27
ATXN3-218ENST00000553309 HSPBP1Q9NZL4 362 aa7.11□□□□□ -1.27
ATXN3-218ENST00000553309 RBPJLQ9UBG7 517 aa7.11□□□□□ -1.27
ATXN3-218ENST00000553309 NDOR1Q9UHB4 597 aa7.11□□□□□ -1.27
ATXN3-218ENST00000553309 WASF3Q9UPY6 502 aa7.11□□□□□ -1.27
ATXN3-218ENST00000553309 TELO2Q9Y4R8 837 aa7.11□□□□□ -1.27
ATXN3-218ENST00000553309 CHD2O14647 1828 aaKnown RBP7.11□□□□□ -1.27
ATXN3-218ENST00000553309 BRWD3Q6RI45 1802 aa7.11□□□□□ -1.27
ATXN3-218ENST00000553309 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-218ENST00000553309 TCRBV5S4A2TA0A5A2 114 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 ARVCFO00192 962 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 WNT9AO14904 365 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 NOBOXO60393 691 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 PYGMP11217 842 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 FAHP16930 419 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 IL13P35225 146 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 ST5P78524 1137 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 NFIXQ14938 502 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 PAN2Q504Q3 1202 aaKnown RBP7.1□□□□□ -1.27
ATXN3-218ENST00000553309 PRR31Q5SQ13 230 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 MCTP2Q6DN12 878 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 ARHGAP36Q6ZRI8 547 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 C16orf59Q7L2K0 433 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 FRMD5Q7Z6J6 570 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 ZNF761Q86XN6 746 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-218ENST00000553309 ADAMTS17Q8TE56 1095 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 ZSWIM3Q96MP5 696 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 TMEM209Q96SK2 561 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 PDGFDQ9GZP0 370 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-218ENST00000553309 ADAM7Q9H2U9 754 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 SLC52A2Q9HAB3 445 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 GLI3P10071 1580 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 RALGAPBQ86X10 1494 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 MST1RQ04912 1400 aa7.1□□□□□ -1.27
ATXN3-218ENST00000553309 GSTA4O15217 222 aa7.09□□□□□ -1.27
ATXN3-218ENST00000553309 EFCAB14O75071 495 aa7.09□□□□□ -1.27
ATXN3-218ENST00000553309 EPHA5P54756 1037 aa7.09□□□□□ -1.27
ATXN3-218ENST00000553309 GPR19Q15760 415 aa7.09□□□□□ -1.27
ATXN3-218ENST00000553309 C2orf27AQ580R0 203 aa7.09□□□□□ -1.27
ATXN3-218ENST00000553309 LCE1DQ5T752 114 aa7.09□□□□□ -1.27
ATXN3-218ENST00000553309 PRAMEF18Q5VWM3 479 aa7.09□□□□□ -1.27
ATXN3-218ENST00000553309 KCTD1Q719H9 257 aa7.09□□□□□ -1.27
ATXN3-218ENST00000553309 ZC3H7AQ8IWR0 971 aaKnown RBP7.09□□□□□ -1.27
ATXN3-218ENST00000553309 SLC7A14Q8TBB6 771 aa7.09□□□□□ -1.27
ATXN3-218ENST00000553309 SH3RF2Q8TEC5 729 aa7.09□□□□□ -1.27
ATXN3-218ENST00000553309 DDX1Q92499 740 aaKnown RBP7.09□□□□□ -1.27
ATXN3-218ENST00000553309 UBXN4Q92575 508 aa7.09□□□□□ -1.27
ATXN3-218ENST00000553309 MRFAP1L1Q96HT8 127 aa7.09□□□□□ -1.27
ATXN3-218ENST00000553309 MAGEB10Q96LZ2 347 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-218ENST00000553309 CD244Q9BZW8 370 aa7.09□□□□□ -1.27
ATXN3-218ENST00000553309 RTEL1Q9NZ71 1219 aa7.09□□□□□ -1.27
ATXN3-218ENST00000553309 CROTQ9UKG9 612 aa7.09□□□□□ -1.27
ATXN3-218ENST00000553309 PTCH2Q9Y6C5 1203 aa7.09□□□□□ -1.27
ATXN3-218ENST00000553309 PTCH1Q13635 1447 aa7.09□□□□□ -1.28
ATXN3-218ENST00000553309 NCOA3Q9Y6Q9 1424 aa7.09□□□□□ -1.28
ATXN3-218ENST00000553309 FOXD2O60548 495 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-218ENST00000553309 APPP05067 770 aa7.08□□□□□ -1.28
ATXN3-218ENST00000553309 CKMP06732 381 aa7.08□□□□□ -1.28
ATXN3-218ENST00000553309 PDE6AP16499 860 aa7.08□□□□□ -1.28
ATXN3-218ENST00000553309 KRT15P19012 456 aa7.08□□□□□ -1.28
ATXN3-218ENST00000553309 DNM2P50570 870 aa7.08□□□□□ -1.28
ATXN3-218ENST00000553309 GJA9P57773 515 aa7.08□□□□□ -1.28
ATXN3-218ENST00000553309 IDI1Q13907 227 aa7.08□□□□□ -1.28
ATXN3-218ENST00000553309 CRY1Q16526 586 aa7.08□□□□□ -1.28
ATXN3-218ENST00000553309 CCDC144BQ3MJ40 725 aa7.08□□□□□ -1.28
ATXN3-218ENST00000553309 BTBD8Q5XKL5 378 aa7.08□□□□□ -1.28
ATXN3-218ENST00000553309 EP400NLQ6ZTU2 488 aa7.08□□□□□ -1.28
ATXN3-218ENST00000553309 PROSER1Q86XN7 944 aa7.08□□□□□ -1.28
ATXN3-218ENST00000553309 NLGN4XQ8N0W4 816 aa7.08□□□□□ -1.28
ATXN3-218ENST00000553309 LNPKQ9C0E8 428 aa7.08□□□□□ -1.28
ATXN3-218ENST00000553309 CBLCQ9ULV8 474 aa7.08□□□□□ -1.28
ATXN3-218ENST00000553309 CCDC141Q6ZP82 1450 aa7.08□□□□□ -1.28
ATXN3-218ENST00000553309 CEP350Q5VT06 3117 aa7.07□□□□□ -1.28
ATXN3-218ENST00000553309 ACOT7O00154 380 aa7.07□□□□□ -1.28
ATXN3-218ENST00000553309 CYP7B1O75881 506 aa7.07□□□□□ -1.28
ATXN3-218ENST00000553309 AMY2AP04746 511 aa7.07□□□□□ -1.28
ATXN3-218ENST00000553309 AMY2BP19961 511 aa7.07□□□□□ -1.28
ATXN3-218ENST00000553309 MLLT6P55198 1093 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-218ENST00000553309 KIAA2012Q0VF49 1180 aa7.07□□□□□ -1.28
ATXN3-218ENST00000553309 RTP5Q14D33 572 aa7.07□□□□□ -1.28
ATXN3-218ENST00000553309 RGL3Q3MIN7 710 aa7.07□□□□□ -1.28
ATXN3-218ENST00000553309 FAM47CQ5HY64 1035 aa7.07□□□□□ -1.28
ATXN3-218ENST00000553309 VASNQ6EMK4 673 aa7.07□□□□□ -1.28
ATXN3-218ENST00000553309 TXNDC5Q8NBS9 432 aaKnown RBP7.07□□□□□ -1.28
ATXN3-218ENST00000553309 GSTCDQ8NEC7 633 aa7.07□□□□□ -1.28
ATXN3-218ENST00000553309 TEPSINQ96N21 525 aa7.07□□□□□ -1.28
ATXN3-218ENST00000553309 CASKIN1Q8WXD9 1431 aa7.07□□□□□ -1.28
ATXN3-218ENST00000553309 CCDC66A2RUB6 948 aa7.06□□□□□ -1.28
ATXN3-218ENST00000553309 KRTAP9-7A8MTY7 169 aa7.06□□□□□ -1.28
ATXN3-218ENST00000553309 PRICKLE3O43900 615 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-218ENST00000553309 ENO2P09104 434 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-218ENST00000553309 JAM2P57087 298 aa7.06□□□□□ -1.28
ATXN3-218ENST00000553309 PHF19Q5T6S3 580 aa7.06□□□□□ -1.28
ATXN3-218ENST00000553309 KRT27Q7Z3Y8 459 aa7.06□□□□□ -1.28
ATXN3-218ENST00000553309 FERMT3Q86UX7 667 aa7.06□□□□□ -1.28
ATXN3-218ENST00000553309 PTRH1Q86Y79 214 aaKnown RBP7.06□□□□□ -1.28
ATXN3-218ENST00000553309 SCLYQ96I15 445 aa7.06□□□□□ -1.28
ATXN3-218ENST00000553309 MRPL4Q9BYD3 311 aaKnown RBP7.06□□□□□ -1.28
ATXN3-218ENST00000553309 L2HGDHQ9H9P8 463 aa7.06□□□□□ -1.28
ATXN3-218ENST00000553309 SFMBT1Q9UHJ3 866 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms