RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 ACSF2Q96CM8 615 aaPredicted RBP13.66□□□□□ -0.22
SNRPF-205ENST00000553192 INPP4AQ96PE3 977 aaPredicted RBP13.66□□□□□ -0.22
SNRPF-205ENST00000553192 TOMM22Q9NS69 142 aa13.66□□□□□ -0.22
SNRPF-205ENST00000553192 CA14Q9ULX7 337 aa13.66□□□□□ -0.22
SNRPF-205ENST00000553192 TRPV2Q9Y5S1 764 aa13.66□□□□□ -0.22
SNRPF-205ENST00000553192 C9IYK1 514 aa13.65□□□□□ -0.22
SNRPF-205ENST00000553192 LRRN2O75325 713 aa13.65□□□□□ -0.22
SNRPF-205ENST00000553192 CCND2P30279 289 aa13.65□□□□□ -0.22
SNRPF-205ENST00000553192 SP4Q02446 784 aa13.65□□□□□ -0.22
SNRPF-205ENST00000553192 SMC1AQ14683 1233 aaKnown RBP13.65□□□□□ -0.22
SNRPF-205ENST00000553192 IER5Q5VY09 327 aa13.65□□□□□ -0.22
SNRPF-205ENST00000553192 PHLDB3Q6NSJ2 640 aa13.65□□□□□ -0.22
SNRPF-205ENST00000553192 KCNT2Q6UVM3 1135 aa13.65□□□□□ -0.22
SNRPF-205ENST00000553192 OTOP3Q7RTS5 596 aa13.65□□□□□ -0.22
SNRPF-205ENST00000553192 SLC22A17Q8WUG5 538 aa13.65□□□□□ -0.22
SNRPF-205ENST00000553192 RGS18Q9NS28 235 aa13.65□□□□□ -0.22
SNRPF-205ENST00000553192 IGSF9Q9P2J2 1179 aa13.65□□□□□ -0.22
SNRPF-205ENST00000553192 SIT1Q9Y3P8 196 aa13.65□□□□□ -0.22
SNRPF-205ENST00000553192 DENND4AQ7Z401 1863 aa13.65□□□□□ -0.22
SNRPF-205ENST00000553192 N4BP1O75113 896 aaKnown RBP13.64□□□□□ -0.23
SNRPF-205ENST00000553192 MARK3P27448 753 aa13.64□□□□□ -0.23
SNRPF-205ENST00000553192 TCF7P36402 384 aaPredicted RBP13.64□□□□□ -0.23
SNRPF-205ENST00000553192 NFX1Q12986 1120 aaKnown RBP13.64□□□□□ -0.23
SNRPF-205ENST00000553192 SLC24A5Q71RS6 500 aa13.64□□□□□ -0.23
SNRPF-205ENST00000553192 GPR149Q86SP6 731 aa13.64□□□□□ -0.23
SNRPF-205ENST00000553192 CELF4Q9BZC1 486 aaKnown RBP13.64□□□□□ -0.23
SNRPF-205ENST00000553192 LRRCC1Q9C099 1032 aa13.64□□□□□ -0.23
SNRPF-205ENST00000553192 VAT1LQ9HCJ6 419 aa13.64□□□□□ -0.23
SNRPF-205ENST00000553192 RNF19AQ9NV58 838 aa13.64□□□□□ -0.23
SNRPF-205ENST00000553192 DZANK1Q9NVP4 752 aa13.64□□□□□ -0.23
SNRPF-205ENST00000553192 MAP3K20Q9NYL2 800 aaKnown RBP13.64□□□□□ -0.23
SNRPF-205ENST00000553192 KDM3AQ9Y4C1 1321 aa13.64□□□□□ -0.23
SNRPF-205ENST00000553192 GSTTP1A0A1W2PQM5 241 aa13.63□□□□□ -0.23
SNRPF-205ENST00000553192 SPTLC1O15269 473 aa13.63□□□□□ -0.23
SNRPF-205ENST00000553192 RFX1P22670 979 aa13.63□□□□□ -0.23
SNRPF-205ENST00000553192 IGBP1P78318 339 aa13.63□□□□□ -0.23
SNRPF-205ENST00000553192 FAM189BP81408 668 aa13.63□□□□□ -0.23
SNRPF-205ENST00000553192 ZNF528Q3MIS6 628 aa13.63□□□□□ -0.23
SNRPF-205ENST00000553192 CCDC149Q6ZUS6 474 aa13.63□□□□□ -0.23
SNRPF-205ENST00000553192 SLC39A11Q8N1S5 342 aa13.63□□□□□ -0.23
SNRPF-205ENST00000553192 SLC44A3Q8N4M1 653 aa13.63□□□□□ -0.23
SNRPF-205ENST00000553192 ZNF558Q96NG5 402 aa13.63□□□□□ -0.23
SNRPF-205ENST00000553192 CASD1Q96PB1 797 aa13.63□□□□□ -0.23
SNRPF-205ENST00000553192 ADAM2Q99965 735 aa13.63□□□□□ -0.23
SNRPF-205ENST00000553192 AMNQ9BXJ7 453 aa13.63□□□□□ -0.23
SNRPF-205ENST00000553192 FOXQ1Q9C009 403 aa13.63□□□□□ -0.23
SNRPF-205ENST00000553192 RTEL1Q9NZ71 1219 aa13.63□□□□□ -0.23
SNRPF-205ENST00000553192 PCDHA1Q9Y5I3 950 aa13.63□□□□□ -0.23
SNRPF-205ENST00000553192 ASPMQ8IZT6 3477 aa13.62□□□□□ -0.23
SNRPF-205ENST00000553192 FRYQ5TBA9 3013 aa13.62□□□□□ -0.23
SNRPF-205ENST00000553192 FIBPO43427 364 aa13.62□□□□□ -0.23
SNRPF-205ENST00000553192 KRT17Q04695 432 aa13.62□□□□□ -0.23
SNRPF-205ENST00000553192 ALX1Q15699 326 aa13.62□□□□□ -0.23
SNRPF-205ENST00000553192 GNPTABQ3T906 1256 aa13.62□□□□□ -0.23
SNRPF-205ENST00000553192 FCHSD1Q86WN1 690 aa13.62□□□□□ -0.23
SNRPF-205ENST00000553192 GPR152Q8TDT2 470 aa13.62□□□□□ -0.23
SNRPF-205ENST00000553192 TMEM40Q8WWA1 233 aa13.62□□□□□ -0.23
SNRPF-205ENST00000553192 AUTS2Q8WXX7 1259 aa13.62□□□□□ -0.23
SNRPF-205ENST00000553192 ZKSCAN3Q9BRR0 538 aa13.62□□□□□ -0.23
SNRPF-205ENST00000553192 EPC1Q9H2F5 836 aa13.62□□□□□ -0.23
SNRPF-205ENST00000553192 CDHR5Q9HBB8 845 aa13.62□□□□□ -0.23
SNRPF-205ENST00000553192 C1orf112Q9NSG2 853 aa13.62□□□□□ -0.23
SNRPF-205ENST00000553192 ZBTB40Q9NUA8 1239 aa13.62□□□□□ -0.23
SNRPF-205ENST00000553192 TMEM161AQ9NX61 479 aa13.62□□□□□ -0.23
SNRPF-205ENST00000553192 SPG21Q9NZD8 308 aa13.62□□□□□ -0.23
SNRPF-205ENST00000553192 USP18Q9UMW8 372 aa13.62□□□□□ -0.23
SNRPF-205ENST00000553192 SMG5Q9UPR3 1016 aaKnown RBP13.62□□□□□ -0.23
SNRPF-205ENST00000553192 NOC2LQ9Y3T9 749 aaKnown RBP13.62□□□□□ -0.23
SNRPF-205ENST00000553192 FRMPD4Q14CM0 1322 aa13.62□□□□□ -0.23
SNRPF-205ENST00000553192 SPEGQ15772 3267 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 DOCK5Q9H7D0 1870 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 SLC30A4O14863 429 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 LILRB5O75023 590 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 CXCL14O95715 111 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 RPLP2P05387 115 aaKnown RBP13.61□□□□□ -0.23
SNRPF-205ENST00000553192 SRFP11831 508 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 INSRRP14616 1297 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 PMLP29590 882 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 PPM1AP35813 382 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 DMWDQ09019 674 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 LETM2Q2VYF4 491 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 SAMD3Q8N6K7 520 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 ZBTB44Q8NCP5 570 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 PNMA1Q8ND90 353 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 PJA1Q8NG27 643 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 MTMR8Q96EF0 704 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 BORCS6Q96GS4 357 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 SENP7Q9BQF6 1050 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 TMEM117Q9H0C3 514 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 ATP6V0A4Q9HBG4 840 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 ARHGEF3Q9NR81 526 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 ERAP1Q9NZ08 941 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 ANGPTL2Q9UKU9 493 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 PCDHA2Q9Y5H9 948 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 SETXQ7Z333 2677 aaKnown RBP13.61□□□□□ -0.23
SNRPF-205ENST00000553192 ZZEF1O43149 2961 aa13.61□□□□□ -0.23
SNRPF-205ENST00000553192 M0QZ92 97 aa13.6□□□□□ -0.23
SNRPF-205ENST00000553192 DHX16O60231 1041 aaKnown RBP13.6□□□□□ -0.23
SNRPF-205ENST00000553192 ATP9AO75110 1047 aa13.6□□□□□ -0.23
SNRPF-205ENST00000553192 FGAP02671 866 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms