RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 OCLNQ16625 522 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 ZSCAN25Q6NSZ9 544 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 GIMAP6Q6P9H5 292 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 TMC7Q7Z402 723 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 VN1R2Q8NFZ6 395 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 ARHGAP45Q92619 1136 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 EAF2Q96CJ1 260 aaPredicted RBP6.05□□□□□ -1.44
CKAP4-203ENST00000553039 CEP95Q96GE4 821 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 USP26Q9BXU7 913 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 FAM126AQ9BYI3 521 aaPredicted RBP6.05□□□□□ -1.44
CKAP4-203ENST00000553039 BCO2Q9BYV7 579 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 SMOC2Q9H3U7 446 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 TUT1Q9H6E5 874 aaKnown RBP6.05□□□□□ -1.44
CKAP4-203ENST00000553039 EHMT1Q9H9B1 1298 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 RC3H2Q9HBD1 1191 aaKnown RBP6.05□□□□□ -1.44
CKAP4-203ENST00000553039 ENTPD7Q9NQZ7 604 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 DZANK1Q9NVP4 752 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 ZSCAN32Q9NX65 697 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 MRVI1Q9Y6F6 885 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 SQORQ9Y6N5 450 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 SCN10AQ9Y5Y9 1956 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 MYH1P12882 1939 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 IGKV6D-41A0A0C4DH26 115 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 PNMA6EA0A0J9YXQ4 647 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.04□□□□□ -1.44
CKAP4-203ENST00000553039 TCRBV5S4A2TA0A5A2 114 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 NFIBO00712 420 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 FSCN2O14926 492 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 ACTN4O43707 911 aaKnown RBP6.04□□□□□ -1.44
CKAP4-203ENST00000553039 ICMTO60725 284 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 RECKO95980 971 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 DCNP07585 359 aaKnown RBP6.04□□□□□ -1.44
CKAP4-203ENST00000553039 TGFB3P10600 412 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 PMLP29590 882 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 NRLP54845 237 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 SNAP25P60880 206 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 CLDN10P78369 228 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 PLCB3Q01970 1234 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 CSTF1Q05048 431 aaKnown RBP6.04□□□□□ -1.44
CKAP4-203ENST00000553039 EML3Q32P44 896 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 KMT5BQ4FZB7 885 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 N4BP2L1Q5TBK1 243 aaPredicted RBP6.04□□□□□ -1.44
CKAP4-203ENST00000553039 TAF2Q6P1X5 1199 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 PDXDC2PQ6P474 469 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 KCTD1Q719H9 257 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 RASGRP2Q7LDG7 609 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 MCF2L2Q86YR7 1114 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 CELF5Q8N6W0 485 aaKnown RBP6.04□□□□□ -1.44
CKAP4-203ENST00000553039 MRPL43Q8N983 215 aaKnown RBP6.04□□□□□ -1.44
CKAP4-203ENST00000553039 NEDD1Q8NHV4 660 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 MRPS27Q92552 414 aaKnown RBP6.04□□□□□ -1.44
CKAP4-203ENST00000553039 SPATA33Q96N06 139 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 ASB16Q96NS5 453 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 KCNK17Q96T54 332 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 TCF25Q9BQ70 676 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 TBC1D17Q9HA65 648 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 MLXIPQ9HAP2 919 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 SPATA6Q9NWH7 488 aaPredicted RBP6.04□□□□□ -1.44
CKAP4-203ENST00000553039 SLC27A5Q9Y2P5 690 aa6.04□□□□□ -1.44
CKAP4-203ENST00000553039 NOP58Q9Y2X3 529 aaKnown RBP6.04□□□□□ -1.44
CKAP4-203ENST00000553039 CFAP47Q6ZTR5 3102 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 WDR87Q6ZQQ6 2873 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 EIF4E1BA6NMX2 242 aaKnown RBP6.03□□□□□ -1.44
CKAP4-203ENST00000553039 GOLIM4O00461 696 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 NCAM2O15394 837 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 IPO8O15397 1037 aaKnown RBP6.03□□□□□ -1.44
CKAP4-203ENST00000553039 CHRNA1P02708 482 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 RETP07949 1114 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 CT47B1P0C2W7 299 aaPredicted RBP6.03□□□□□ -1.44
CKAP4-203ENST00000553039 ZNF286BP0CG31 522 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 SMIM10L2AP0DMW4 78 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 SMIM10L2BP0DMW5 78 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 GHRP10912 638 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 HOXD8P13378 290 aaPredicted RBP6.03□□□□□ -1.44
CKAP4-203ENST00000553039 TGM1P22735 817 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 MAGEA9P43362 315 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 TFAP4Q01664 338 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 GIT2Q14161 759 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 UBE3CQ15386 1083 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 ECM1Q16610 540 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 PTPRNQ16849 979 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 PAN2Q504Q3 1202 aaKnown RBP6.03□□□□□ -1.44
CKAP4-203ENST00000553039 CELF3Q5SZQ8 465 aaKnown RBP6.03□□□□□ -1.44
CKAP4-203ENST00000553039 RARS2Q5T160 578 aaKnown RBP6.03□□□□□ -1.44
CKAP4-203ENST00000553039 ARHGEF16Q5VV41 709 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 IER5Q5VY09 327 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 PLPP4Q5VZY2 271 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 KIAA1841Q6NSI8 718 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 BTNL9Q6UXG8 535 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 CCDC149Q6ZUS6 474 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 LAPTM4BQ86VI4 370 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 ERC1Q8IUD2 1116 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 STK11IPQ8N1F8 1099 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 ZBTB44Q8NCP5 570 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 SSH3Q8TE77 659 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 CLEC4DQ8WXI8 215 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 GLG1Q92896 1179 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 RMDN3Q96TC7 470 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 NELL2Q99435 816 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 C16orf70Q9BSU1 422 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 182.4 ms