RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 OATP04181 439 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 ATP4AP20648 1035 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 CYP2C18P33260 490 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 QARSP47897 775 aaKnown RBP11.13□□□□□ -0.63
LETMD1-234ENST00000552645 PSMC5P62195 406 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 EPHA7Q15375 998 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 B3GNT9Q6UX72 402 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 DTHD1Q6ZMT9 781 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 GPT2Q8TD30 523 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 ARID3AQ99856 593 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 EIF2AK1Q9BQI3 630 aaKnown RBP11.13□□□□□ -0.63
LETMD1-234ENST00000552645 SH2D3AQ9BRG2 576 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 LXNQ9BS40 222 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 TUBE1Q9UJT0 475 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 TBX21Q9UL17 535 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 CEP131Q9UPN4 1083 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 SCN5AQ14524 2016 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 LTBP2Q14767 1821 aa11.12□□□□□ -0.63
LETMD1-234ENST00000552645 UMODL1Q5DID0 1318 aa11.12□□□□□ -0.63
LETMD1-234ENST00000552645 VWA3AA6NCI4 1184 aa11.12□□□□□ -0.63
LETMD1-234ENST00000552645 LAD1O00515 517 aa11.12□□□□□ -0.63
LETMD1-234ENST00000552645 HBP1O60381 514 aa11.12□□□□□ -0.63
LETMD1-234ENST00000552645 PTMAP06454 111 aaKnown RBP11.12□□□□□ -0.63
LETMD1-234ENST00000552645 P4HBP07237 508 aaKnown RBP11.12□□□□□ -0.63
LETMD1-234ENST00000552645 CCL23P55773 120 aa11.12□□□□□ -0.63
LETMD1-234ENST00000552645 FAM193AP78312 1265 aa11.12□□□□□ -0.63
LETMD1-234ENST00000552645 ATP2C1P98194 919 aaPredicted RBP11.12□□□□□ -0.63
LETMD1-234ENST00000552645 NOLC1Q14978 699 aaKnown RBP eCLIP11.12□□□□□ -0.638e-7■■■□□ 17.6
LETMD1-234ENST00000552645 ZRSR1Q15695 479 aaKnown RBP11.12□□□□□ -0.63
LETMD1-234ENST00000552645 RETREG2Q8NC44 543 aa11.12□□□□□ -0.63
LETMD1-234ENST00000552645 ERMNQ8TAM6 284 aa11.12□□□□□ -0.63
LETMD1-234ENST00000552645 BADQ92934 168 aa11.12□□□□□ -0.63
LETMD1-234ENST00000552645 SYAP1Q96A49 352 aaPredicted RBP11.12□□□□□ -0.63
LETMD1-234ENST00000552645 FAM167AQ96KS9 214 aa11.12□□□□□ -0.63
LETMD1-234ENST00000552645 RAB34Q9BZG1 259 aa11.12□□□□□ -0.63
LETMD1-234ENST00000552645 FAM49AQ9H0Q0 323 aaPredicted RBP11.12□□□□□ -0.63
LETMD1-234ENST00000552645 NRBP2Q9NSY0 501 aa11.12□□□□□ -0.63
LETMD1-234ENST00000552645 TFIP11Q9UBB9 837 aaKnown RBP11.12□□□□□ -0.63
LETMD1-234ENST00000552645 LRWD1Q9UFC0 647 aa11.12□□□□□ -0.63
LETMD1-234ENST00000552645 TCHHQ07283 1943 aa11.12□□□□□ -0.63
LETMD1-234ENST00000552645 LOXHD1Q8IVV2 1947 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 A0A087WWV3 80 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 RRN3P2A6NIE6 340 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 KIAA0355O15063 1070 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 CTIFO43310 598 aaKnown RBP11.11□□□□□ -0.63
LETMD1-234ENST00000552645 TIMP1P01033 207 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 ITGB8P26012 769 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 KLRC1P26715 233 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 MARCKSP29966 332 aaPredicted RBP11.11□□□□□ -0.63
LETMD1-234ENST00000552645 CDC25AP30304 524 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 THPOP40225 353 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 IL17AQ16552 155 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 MTERF2Q49AM1 385 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 DNTTIP2Q5QJE6 756 aaKnown RBP11.11□□□□□ -0.63
LETMD1-234ENST00000552645 PLA2G4FQ68DD2 849 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 RUFY4Q6ZNE9 571 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 CREBRFQ8IUR6 639 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 CCDC155Q8N6L0 562 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 METTL13Q8N6R0 699 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 WNT8BQ93098 351 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 CCDC43Q96MW1 224 aaKnown RBP11.11□□□□□ -0.63
LETMD1-234ENST00000552645 CTAGE1Q96RT6 745 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 USP28Q96RU2 1077 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 NOC4LQ9BVI4 516 aaKnown RBP11.11□□□□□ -0.63
LETMD1-234ENST00000552645 TSPY26PQ9H489 355 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 OGFRQ9NZT2 677 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 TMEM63CQ9P1W3 806 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 WRAP73Q9P2S5 460 aaPredicted RBP11.11□□□□□ -0.63
LETMD1-234ENST00000552645 ARID2Q68CP9 1835 aa11.11□□□□□ -0.63
LETMD1-234ENST00000552645 PP2D1A8MPX8 630 aa11.1□□□□□ -0.63
LETMD1-234ENST00000552645 DKC1O60832 514 aaKnown RBP eCLIP11.1□□□□□ -0.63
LETMD1-234ENST00000552645 BMP15O95972 392 aa11.1□□□□□ -0.63
LETMD1-234ENST00000552645 CTSHP09668 335 aa11.1□□□□□ -0.63
LETMD1-234ENST00000552645 CCT6AP40227 531 aaKnown RBP11.1□□□□□ -0.63
LETMD1-234ENST00000552645 PRPHP41219 470 aa11.1□□□□□ -0.63
LETMD1-234ENST00000552645 MAGEA10P43363 369 aaPredicted RBP11.1□□□□□ -0.63
LETMD1-234ENST00000552645 FXR2P51116 673 aaKnown RBP eCLIP11.1□□□□□ -0.63
LETMD1-234ENST00000552645 PTK7Q13308 1070 aa11.1□□□□□ -0.63
LETMD1-234ENST00000552645 BFSP2Q13515 415 aa11.1□□□□□ -0.63
LETMD1-234ENST00000552645 STK38Q15208 465 aa11.1□□□□□ -0.63
LETMD1-234ENST00000552645 XKR3Q5GH77 459 aa11.1□□□□□ -0.63
LETMD1-234ENST00000552645 ZNF484Q5JVG2 852 aa11.1□□□□□ -0.63
LETMD1-234ENST00000552645 MARCH8Q5T0T0 291 aa11.1□□□□□ -0.63
LETMD1-234ENST00000552645 SERINC5Q86VE9 423 aa11.1□□□□□ -0.63
LETMD1-234ENST00000552645 SNX29Q8TEQ0 813 aa11.1□□□□□ -0.63
LETMD1-234ENST00000552645 DHX38Q92620 1227 aaKnown RBP11.1□□□□□ -0.63
LETMD1-234ENST00000552645 SCLYQ96I15 445 aa11.1□□□□□ -0.63
LETMD1-234ENST00000552645 ZNF396Q96N95 335 aaPredicted RBP11.1□□□□□ -0.63
LETMD1-234ENST00000552645 ZSWIM4Q9H7M6 989 aa11.1□□□□□ -0.63
LETMD1-234ENST00000552645 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
LETMD1-234ENST00000552645 TANC1Q9C0D5 1861 aa11.1□□□□□ -0.63
LETMD1-234ENST00000552645 COL1A2P08123 1366 aa11.1□□□□□ -0.63
LETMD1-234ENST00000552645 CCDC66A2RUB6 948 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 RBAK-RBAKDNI3L0D1 243 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 ZBTB39O15060 712 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 MED24O75448 989 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 SLITRK3O94933 977 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 HOXC8P31273 242 aa11.09□□□□□ -0.63
LETMD1-234ENST00000552645 YWHABP31946 246 aaKnown RBP11.09□□□□□ -0.63
LETMD1-234ENST00000552645 TBC1D8BQ0IIM8 1120 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms