RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 HNRNPCP07910 306 aaKnown RBP eCLIP4.94□□□□□ -1.62
USP44-208ENST00000552440 BPIP17213 487 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 OAS2P29728 719 aaKnown RBP4.94□□□□□ -1.62
USP44-208ENST00000552440 TRHRP34981 398 aaPredicted RBP4.94□□□□□ -1.62
USP44-208ENST00000552440 ADD2P35612 726 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 RECQLP46063 649 aaPredicted RBP4.94□□□□□ -1.62
USP44-208ENST00000552440 STT3AP46977 705 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 ID4P47928 161 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 USP14P54578 494 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 TMEM62Q0P6H9 643 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 SLC14A2Q15849 920 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 INTS11Q5TA45 600 aaKnown RBP4.94□□□□□ -1.62
USP44-208ENST00000552440 DCAF15Q66K64 600 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 SLC41A1Q8IVJ1 513 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 LMNTD2Q8IXW0 634 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 FAM43AQ8N2R8 423 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 ZNF655Q8N720 491 aaPredicted RBP4.94□□□□□ -1.62
USP44-208ENST00000552440 DAGLBQ8NCG7 672 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 LINC01599Q8WXQ3 324 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 PPP1R14AQ96A00 147 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 ZNF496Q96IT1 587 aaPredicted RBP4.94□□□□□ -1.62
USP44-208ENST00000552440 CRB3Q9BUF7 120 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 KRTAP4-2Q9BYR5 136 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.94□□□□□ -1.62
USP44-208ENST00000552440 ZCCHC4Q9H5U6 513 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 C19orf44Q9H6X5 657 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 ALG13Q9NP73 1137 aaKnown RBP4.94□□□□□ -1.62
USP44-208ENST00000552440 SMC4Q9NTJ3 1288 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 BLOC1S4Q9NUP1 217 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.94□□□□□ -1.62
USP44-208ENST00000552440 FBXO10Q9UK96 956 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 PTPN22Q9Y2R2 807 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 GPR52Q9Y2T5 361 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 TTLL3Q9Y4R7 772 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 SLC4A7Q9Y6M7 1214 aa4.94□□□□□ -1.62
USP44-208ENST00000552440 K7ESF4 209 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 FZD9O00144 591 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 KPNA6O60684 536 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 TMCC2O75069 709 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 PRKD3O94806 890 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 LTFP02788 710 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 RHCEP18577 417 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 IARSP41252 1262 aaKnown RBP4.93□□□□□ -1.62
USP44-208ENST00000552440 GRK6P43250 576 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 TM4SF4P48230 202 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 PCBP3P57721 371 aaKnown RBP4.93□□□□□ -1.62
USP44-208ENST00000552440 RHDQ02161 417 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 TEKQ02763 1124 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 KIF22Q14807 665 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 CHST15Q7LFX5 561 aaPredicted RBP4.93□□□□□ -1.62
USP44-208ENST00000552440 SAPCD2Q86UD0 394 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 BVESQ8NE79 360 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 GSTCDQ8NEC7 633 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 TRIM63Q969Q1 353 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 TBC1D20Q96BZ9 403 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 MRGPRX3Q96LB0 322 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 SGCZQ96LD1 299 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 SLC52A2Q9HAB3 445 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 C1orf112Q9NSG2 853 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 RRN3Q9NYV6 651 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 ABCF2Q9UG63 623 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 ODF2LQ9ULJ1 636 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 SYNPO2Q9UMS6 1093 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 TMX2Q9Y320 296 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 ZNF451Q9Y4E5 1061 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 hCG_1642624A0A1W2PR95 340 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 VAMP4O75379 141 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 IFIT1P09914 478 aaKnown RBP4.93□□□□□ -1.62
USP44-208ENST00000552440 CHKAP35790 457 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 ROR1Q01973 937 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 ZNF460Q14592 562 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 NBPF8Q3BBV2 869 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 INAVAQ3KP66 663 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 ANKRD39Q53RE8 183 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 GJC2Q5T442 439 aaPredicted RBP4.93□□□□□ -1.62
USP44-208ENST00000552440 AGAP9Q5VTM2 703 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 BRAPQ7Z569 592 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 FGD2Q7Z6J4 655 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 SNX32Q86XE0 403 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 CCDC144CPQ8IYA2 1237 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 FAM26EQ8N5C1 309 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 NUP133Q8WUM0 1156 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 CCDC47Q96A33 483 aaKnown RBP4.93□□□□□ -1.62
USP44-208ENST00000552440 NUP88Q99567 741 aaPredicted RBP4.93□□□□□ -1.62
USP44-208ENST00000552440 PDGFDQ9GZP0 370 aaPredicted RBP4.93□□□□□ -1.62
USP44-208ENST00000552440 GBP3Q9H0R5 595 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 RSAD1Q9HA92 442 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 CD248Q9HCU0 757 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 SIRT5Q9NXA8 310 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 PDP2Q9P2J9 529 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 NDOR1Q9UHB4 597 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 TPCN1Q9ULQ1 816 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 ZNF281Q9Y2X9 895 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 KCTD3Q9Y597 815 aa4.93□□□□□ -1.62
USP44-208ENST00000552440 TNPO3Q9Y5L0 923 aaKnown RBP4.93□□□□□ -1.62
USP44-208ENST00000552440 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.92□□□□□ -1.62
USP44-208ENST00000552440 KRTAP9-7A8MTY7 169 aa4.92□□□□□ -1.62
USP44-208ENST00000552440 WASH4PA8MWX3 477 aa4.92□□□□□ -1.62
USP44-208ENST00000552440 SHOXO15266 292 aa4.92□□□□□ -1.62
USP44-208ENST00000552440 DLX3O60479 287 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms