RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 LMNAP02545 664 aaKnown RBP17.55■□□□□ 0.4
CACNB3-220ENST00000551716 AOC1P19801 751 aa17.55■□□□□ 0.4
CACNB3-220ENST00000551716 SDSP20132 328 aa17.55■□□□□ 0.4
CACNB3-220ENST00000551716 IBSPP21815 317 aaPredicted RBP17.55■□□□□ 0.4
CACNB3-220ENST00000551716 FAM189BP81408 668 aa17.55■□□□□ 0.4
CACNB3-220ENST00000551716 APOBRQ0VD83 1088 aa17.55■□□□□ 0.4
CACNB3-220ENST00000551716 PUM1Q14671 1186 aaKnown RBP eCLIP17.55■□□□□ 0.4
CACNB3-220ENST00000551716 PLPPR4Q7Z2D5 763 aa17.55■□□□□ 0.4
CACNB3-220ENST00000551716 CCDC105Q8IYK2 499 aa17.55■□□□□ 0.4
CACNB3-220ENST00000551716 MRPL43Q8N983 215 aaKnown RBP17.55■□□□□ 0.4
CACNB3-220ENST00000551716 FLCNQ8NFG4 579 aa17.55■□□□□ 0.4
CACNB3-220ENST00000551716 RILPL2Q969X0 211 aa17.55■□□□□ 0.4
CACNB3-220ENST00000551716 DSCC1Q9BVC3 393 aa17.55■□□□□ 0.4
CACNB3-220ENST00000551716 TMEM161AQ9NX61 479 aa17.55■□□□□ 0.4
CACNB3-220ENST00000551716 C9IYK1 514 aa17.54■□□□□ 0.4
CACNB3-220ENST00000551716 SMC1AQ14683 1233 aaKnown RBP17.54■□□□□ 0.4
CACNB3-220ENST00000551716 ANGPT1Q15389 498 aa17.54■□□□□ 0.4
CACNB3-220ENST00000551716 TMEM266Q2M3C6 531 aa17.54■□□□□ 0.4
CACNB3-220ENST00000551716 ZNF558Q96NG5 402 aa17.54■□□□□ 0.4
CACNB3-220ENST00000551716 TMEM117Q9H0C3 514 aa17.54■□□□□ 0.4
CACNB3-220ENST00000551716 CWH43Q9H720 699 aa17.54■□□□□ 0.4
CACNB3-220ENST00000551716 ERVK-5Q9HDB9 667 aa17.54■□□□□ 0.4
CACNB3-220ENST00000551716 HCFC2Q9Y5Z7 792 aa17.54■□□□□ 0.4
CACNB3-220ENST00000551716 VPS13AQ96RL7 3174 aa17.53■□□□□ 0.4
CACNB3-220ENST00000551716 ERICH2A1L162 156 aa17.53■□□□□ 0.4
CACNB3-220ENST00000551716 CYTH3O43739 400 aa17.53■□□□□ 0.4
CACNB3-220ENST00000551716 ASGR2P07307 311 aa17.53■□□□□ 0.4
CACNB3-220ENST00000551716 PDE4AP27815 886 aa17.53■□□□□ 0.4
CACNB3-220ENST00000551716 SLC26A2P50443 739 aa17.53■□□□□ 0.4
CACNB3-220ENST00000551716 TRDNQ13061 729 aa17.53■□□□□ 0.4
CACNB3-220ENST00000551716 MTMR1Q13613 665 aa17.53■□□□□ 0.4
CACNB3-220ENST00000551716 SLC35G1Q2M3R5 365 aa17.53■□□□□ 0.4
CACNB3-220ENST00000551716 USP17L6PQ6QN14 398 aa17.53■□□□□ 0.4
CACNB3-220ENST00000551716 KCNT2Q6UVM3 1135 aa17.53■□□□□ 0.4
CACNB3-220ENST00000551716 DTWD2Q8NBA8 298 aa17.53■□□□□ 0.4
CACNB3-220ENST00000551716 ACSF2Q96CM8 615 aaPredicted RBP17.53■□□□□ 0.4
CACNB3-220ENST00000551716 RMDN1Q96DB5 314 aa17.53■□□□□ 0.4
CACNB3-220ENST00000551716 JPH1Q9HDC5 661 aaPredicted RBP17.53■□□□□ 0.4
CACNB3-220ENST00000551716 CYP26B1Q9NR63 512 aa17.53■□□□□ 0.4
CACNB3-220ENST00000551716 DZANK1Q9NVP4 752 aa17.53■□□□□ 0.4
CACNB3-220ENST00000551716 SPG21Q9NZD8 308 aa17.53■□□□□ 0.4
CACNB3-220ENST00000551716 DBR1Q9UK59 544 aaKnown RBP17.53■□□□□ 0.4
CACNB3-220ENST00000551716 ST3GAL5Q9UNP4 418 aa17.53■□□□□ 0.4
CACNB3-220ENST00000551716 ZNF292O60281 2723 aa17.53■□□□□ 0.4
CACNB3-220ENST00000551716 MED19A0JLT2 244 aaPredicted RBP17.52■□□□□ 0.4
CACNB3-220ENST00000551716 HIP1O00291 1037 aa17.52■□□□□ 0.4
CACNB3-220ENST00000551716 ITGB5P18084 799 aa17.52■□□□□ 0.4
CACNB3-220ENST00000551716 STAT5BP51692 787 aa17.52■□□□□ 0.4
CACNB3-220ENST00000551716 MTHFD1LQ6UB35 978 aa17.52■□□□□ 0.4
CACNB3-220ENST00000551716 TMEM87AQ8NBN3 555 aa17.52■□□□□ 0.4
CACNB3-220ENST00000551716 ZBTB10Q96DT7 871 aa17.52■□□□□ 0.4
CACNB3-220ENST00000551716 SMOC2Q9H3U7 446 aa17.52■□□□□ 0.4
CACNB3-220ENST00000551716 GINS2Q9Y248 185 aa17.52■□□□□ 0.4
CACNB3-220ENST00000551716 NOC2LQ9Y3T9 749 aaKnown RBP17.52■□□□□ 0.4
CACNB3-220ENST00000551716 CACNA1BQ00975 2339 aa17.52■□□□□ 0.39
CACNB3-220ENST00000551716 C2orf71A6NGG8 1288 aa17.51■□□□□ 0.39
CACNB3-220ENST00000551716 MEIS2O14770 477 aa17.51■□□□□ 0.39
CACNB3-220ENST00000551716 MGEA5O60502 916 aa17.51■□□□□ 0.39
CACNB3-220ENST00000551716 EOMESO95936 686 aa17.51■□□□□ 0.39
CACNB3-220ENST00000551716 TDGQ13569 410 aa17.51■□□□□ 0.39
CACNB3-220ENST00000551716 PLCB4Q15147 1175 aa17.51■□□□□ 0.39
CACNB3-220ENST00000551716 KIAA1841Q6NSI8 718 aa17.51■□□□□ 0.39
CACNB3-220ENST00000551716 CWC27Q6UX04 472 aaKnown RBP17.51■□□□□ 0.39
CACNB3-220ENST00000551716 ABI1Q8IZP0 508 aa17.51■□□□□ 0.39
CACNB3-220ENST00000551716 LRRC43Q8N309 656 aa17.51■□□□□ 0.39
CACNB3-220ENST00000551716 RRP36Q96EU6 259 aaKnown RBP17.51■□□□□ 0.39
CACNB3-220ENST00000551716 PCYT2Q99447 389 aa17.51■□□□□ 0.39
CACNB3-220ENST00000551716 JADE2Q9NQC1 790 aa17.51■□□□□ 0.39
CACNB3-220ENST00000551716 DIAPH3Q9NSV4 1193 aa17.51■□□□□ 0.39
CACNB3-220ENST00000551716 SLC9A2Q9UBY0 812 aa17.51■□□□□ 0.39
CACNB3-220ENST00000551716 UBIAD1Q9Y5Z9 338 aa17.51■□□□□ 0.39
CACNB3-220ENST00000551716 MYO10Q9HD67 2058 aa17.51■□□□□ 0.39
CACNB3-220ENST00000551716 PLXNA4Q9HCM2 1894 aa17.5■□□□□ 0.39
CACNB3-220ENST00000551716 KIAA1671Q9BY89 1806 aa17.5■□□□□ 0.39
CACNB3-220ENST00000551716 CLASP2O75122 1294 aaKnown RBP17.5■□□□□ 0.39
CACNB3-220ENST00000551716 FGFR1P11362 822 aa17.5■□□□□ 0.39
CACNB3-220ENST00000551716 KLRC1P26715 233 aa17.5■□□□□ 0.39
CACNB3-220ENST00000551716 SMARCA1P28370 1054 aa17.5■□□□□ 0.39
CACNB3-220ENST00000551716 TROAPQ12815 778 aa17.5■□□□□ 0.39
CACNB3-220ENST00000551716 GIT2Q14161 759 aa17.5■□□□□ 0.39
CACNB3-220ENST00000551716 SART3Q15020 963 aaKnown RBP17.5■□□□□ 0.39
CACNB3-220ENST00000551716 CWF19L1Q69YN2 538 aaKnown RBP17.5■□□□□ 0.39
CACNB3-220ENST00000551716 OTOP3Q7RTS5 596 aa17.5■□□□□ 0.39
CACNB3-220ENST00000551716 SDF4Q9BRK5 362 aa17.5■□□□□ 0.39
CACNB3-220ENST00000551716 PSTPIP2Q9H939 334 aa17.5■□□□□ 0.39
CACNB3-220ENST00000551716 SEC63Q9UGP8 760 aaKnown RBP17.5■□□□□ 0.39
CACNB3-220ENST00000551716 FBXL21Q9UKT6 434 aa17.5■□□□□ 0.39
CACNB3-220ENST00000551716 WDR87Q6ZQQ6 2873 aa17.49■□□□□ 0.39
CACNB3-220ENST00000551716 CARNS1A5YM72 827 aa17.49■□□□□ 0.39
CACNB3-220ENST00000551716 IFIT3O14879 490 aaKnown RBP17.49■□□□□ 0.39
CACNB3-220ENST00000551716 PI15O43692 258 aa17.49■□□□□ 0.39
CACNB3-220ENST00000551716 NPR3P17342 541 aa17.49■□□□□ 0.39
CACNB3-220ENST00000551716 CRYBB1P53674 252 aaPredicted RBP17.49■□□□□ 0.39
CACNB3-220ENST00000551716 RARS2Q5T160 578 aaKnown RBP17.49■□□□□ 0.39
CACNB3-220ENST00000551716 CATIPQ7Z7H3 387 aa17.49■□□□□ 0.39
CACNB3-220ENST00000551716 KIAA2013Q8IYS2 634 aa17.49■□□□□ 0.39
CACNB3-220ENST00000551716 KIAA0319LQ8IZA0 1049 aa17.49■□□□□ 0.39
CACNB3-220ENST00000551716 TRAPPC12Q8WVT3 735 aa17.49■□□□□ 0.39
CACNB3-220ENST00000551716 CASD1Q96PB1 797 aa17.49■□□□□ 0.39
CACNB3-220ENST00000551716 PKD2L1Q9P0L9 805 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms