RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 SARSP49591 514 aaKnown RBP4.88□□□□□ -1.63
SCAF11-215ENST00000551391 ITGA1P56199 1179 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 IL2P60568 153 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 PHC1P78364 1004 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 ZXDAP98168 799 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 STRN3Q13033 797 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 LRRC32Q14392 662 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 TMEM132BQ14DG7 1078 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 EPHA7Q15375 998 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 VASNQ6EMK4 673 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 C11orf74Q86VG3 221 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 NME9Q86XW9 330 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 ZZZ3Q8IYH5 903 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 TTLL6Q8N841 843 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 DTX3Q8N9I9 347 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 KYQ8NBH2 561 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 IGDCC4Q8TDY8 1250 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 C16orf92Q96LL3 132 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 ELF4Q99607 663 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-215ENST00000551391 GORASP1Q9BQQ3 440 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 C11orf84Q9BUA3 381 aaPredicted RBP4.88□□□□□ -1.63
SCAF11-215ENST00000551391 PCIF1Q9H4Z3 704 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 DLL4Q9NR61 685 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 NTMQ9P121 344 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 BTBD7Q9P203 1132 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 MCM8Q9UJA3 840 aa4.88□□□□□ -1.63
SCAF11-215ENST00000551391 APOBEC2Q9Y235 224 aaKnown RBP4.88□□□□□ -1.63
SCAF11-215ENST00000551391 NOP58Q9Y2X3 529 aaKnown RBP4.88□□□□□ -1.63
SCAF11-215ENST00000551391 GOLGA6L22H0YM25 854 aa4.87□□□□□ -1.63
SCAF11-215ENST00000551391 NEMP1O14524 444 aa4.87□□□□□ -1.63
SCAF11-215ENST00000551391 TGM5O43548 720 aa4.87□□□□□ -1.63
SCAF11-215ENST00000551391 ITGB3P05106 788 aa4.87□□□□□ -1.63
SCAF11-215ENST00000551391 SLC9A1P19634 815 aa4.87□□□□□ -1.63
SCAF11-215ENST00000551391 ADAM17P78536 824 aa4.87□□□□□ -1.63
SCAF11-215ENST00000551391 SMAD3P84022 425 aaKnown RBP4.87□□□□□ -1.63
SCAF11-215ENST00000551391 PFKPQ01813 784 aa4.87□□□□□ -1.63
SCAF11-215ENST00000551391 ADCY1Q08828 1119 aa4.87□□□□□ -1.63
SCAF11-215ENST00000551391 ADAM9Q13443 819 aa4.87□□□□□ -1.63
SCAF11-215ENST00000551391 SMAD2Q15796 467 aaKnown RBP4.87□□□□□ -1.63
SCAF11-215ENST00000551391 RNF219Q5W0B1 726 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-215ENST00000551391 DDX42Q86XP3 938 aaKnown RBP eCLIP4.87□□□□□ -1.63
SCAF11-215ENST00000551391 ASB15Q8WXK1 588 aa4.87□□□□□ -1.63
SCAF11-215ENST00000551391 E2F7Q96AV8 911 aa4.87□□□□□ -1.63
SCAF11-215ENST00000551391 GPATCH3Q96I76 525 aa4.87□□□□□ -1.63
SCAF11-215ENST00000551391 LOXL4Q96JB6 756 aa4.87□□□□□ -1.63
SCAF11-215ENST00000551391 GPR101Q96P66 508 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-215ENST00000551391 GBP4Q96PP9 640 aa4.87□□□□□ -1.63
SCAF11-215ENST00000551391 WRNIP1Q96S55 665 aa4.87□□□□□ -1.63
SCAF11-215ENST00000551391 FAM126AQ9BYI3 521 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-215ENST00000551391 EMC7Q9NPA0 242 aa4.87□□□□□ -1.63
SCAF11-215ENST00000551391 SPTLC3Q9NUV7 552 aa4.87□□□□□ -1.63
SCAF11-215ENST00000551391 H2AFY2Q9P0M6 372 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-215ENST00000551391 DUSP10Q9Y6W6 482 aa4.87□□□□□ -1.63
SCAF11-215ENST00000551391 PHLDB1Q86UU1 1377 aa4.87□□□□□ -1.63
SCAF11-215ENST00000551391 GPR39O43194 453 aa4.86□□□□□ -1.63
SCAF11-215ENST00000551391 AKAP8O43823 692 aaKnown RBP4.86□□□□□ -1.63
SCAF11-215ENST00000551391 ULK1O75385 1050 aa4.86□□□□□ -1.63
SCAF11-215ENST00000551391 CYP7B1O75881 506 aa4.86□□□□□ -1.63
SCAF11-215ENST00000551391 CHGBP05060 677 aa4.86□□□□□ -1.63
SCAF11-215ENST00000551391 MMEP08473 750 aa4.86□□□□□ -1.63
SCAF11-215ENST00000551391 PTGS1P23219 599 aa4.86□□□□□ -1.63
SCAF11-215ENST00000551391 FAPQ12884 760 aa4.86□□□□□ -1.63
SCAF11-215ENST00000551391 STAT4Q14765 748 aa4.86□□□□□ -1.63
SCAF11-215ENST00000551391 ATP13A4Q4VNC1 1196 aa4.86□□□□□ -1.63
SCAF11-215ENST00000551391 ZNF610Q8N9Z0 462 aa4.86□□□□□ -1.63
SCAF11-215ENST00000551391 WDR66Q8TBY9 1149 aa4.86□□□□□ -1.63
SCAF11-215ENST00000551391 FOXRED1Q96CU9 486 aaPredicted RBP4.86□□□□□ -1.63
SCAF11-215ENST00000551391 NOX5Q96PH1 765 aa4.86□□□□□ -1.63
SCAF11-215ENST00000551391 ARHGAP28Q9P2N2 729 aa4.86□□□□□ -1.63
SCAF11-215ENST00000551391 SRRDQ9UH36 339 aa4.86□□□□□ -1.63
SCAF11-215ENST00000551391 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-215ENST00000551391 MPIG6BO95866 241 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 FSHBP01225 129 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 TNFRSF1AP19438 455 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 PTX3P26022 381 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-215ENST00000551391 LSP1P33241 339 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 THBS2P35442 1172 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 TERF2Q15554 542 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 SKIDA1Q1XH10 827 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 PRR31Q5SQ13 230 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 TMC5Q6UXY8 1006 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 RTN4RL1Q86UN2 441 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-215ENST00000551391 RASSF3Q86WH2 238 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 CHST13Q8NET6 341 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 ATL2Q8NHH9 583 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 SLC5A5Q92911 643 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 ZBTB8AQ96BR9 441 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 CLIC6Q96NY7 704 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 FOXB1Q99853 325 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 SYT3Q9BQG1 590 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 ZMAT4Q9H898 229 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 INCENPQ9NQS7 918 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 TOMM22Q9NS69 142 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 GALNT8Q9NY28 637 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 USP36Q9P275 1121 aaKnown RBP4.85□□□□□ -1.63
SCAF11-215ENST00000551391 RBPJLQ9UBG7 517 aa4.85□□□□□ -1.63
SCAF11-215ENST00000551391 MAFO75444 373 aaPredicted RBP4.84□□□□□ -1.63
SCAF11-215ENST00000551391 CDK11BP21127 795 aaKnown RBP4.84□□□□□ -1.63
SCAF11-215ENST00000551391 CD40P25942 277 aa4.84□□□□□ -1.63
SCAF11-215ENST00000551391 ID4P47928 161 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms