RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 DSEQ9UL01 958 aa6.83□□□□□ -1.32
CPSF6-206ENST00000550987 RWDD3Q9Y3V2 267 aa6.83□□□□□ -1.32
CPSF6-206ENST00000550987 RIPOR2Q9Y4F9 1068 aa6.83□□□□□ -1.32
CPSF6-206ENST00000550987 NUB1Q9Y5A7 615 aa6.83□□□□□ -1.32
CPSF6-206ENST00000550987 UNC80Q8N2C7 3258 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 UBR1Q8IWV7 1749 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 ABCA3Q99758 1704 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 A0A1W2PQ45 241 aaPredicted RBP6.82□□□□□ -1.32
CPSF6-206ENST00000550987 A0A1W2PQY0 241 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 TGM5O43548 720 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 ABLIM3O94929 683 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 PF4V1P10720 104 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 FSTP19883 344 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 ERVK-21P61565 698 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 DUSP4Q13115 394 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 IKZF1Q13422 519 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 TMEM132BQ14DG7 1078 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 TERF2Q15554 542 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 NXNQ6DKJ4 435 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 OTOP3Q7RTS5 596 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 UNC5CLQ8IV45 518 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 CBARPQ8N350 705 aaPredicted RBP6.82□□□□□ -1.32
CPSF6-206ENST00000550987 PIP4K2CQ8TBX8 421 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 MORC4Q8TE76 937 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 ELF4Q99607 663 aaPredicted RBP6.82□□□□□ -1.32
CPSF6-206ENST00000550987 RHOBTB2Q9BYZ6 727 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 SLC13A1Q9BZW2 595 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 SMURF1Q9HCE7 757 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 ACSS2Q9NR19 701 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.82□□□□□ -1.32
CPSF6-206ENST00000550987 ZC3H7BQ9UGR2 993 aaKnown RBP6.82□□□□□ -1.32
CPSF6-206ENST00000550987 RAPGEFL1Q9UHV5 662 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 GIT1Q9Y2X7 761 aa6.82□□□□□ -1.32
CPSF6-206ENST00000550987 SPTBN5Q9NRC6 3674 aaKnown RBP6.82□□□□□ -1.32
CPSF6-206ENST00000550987 SLIT2O94813 1529 aa6.81□□□□□ -1.32
CPSF6-206ENST00000550987 KLHL33A6NCF5 533 aa6.81□□□□□ -1.32
CPSF6-206ENST00000550987 NKRFO15226 690 aaKnown RBP eCLIP6.81□□□□□ -1.326e-9■□□□□ 11.2
CPSF6-206ENST00000550987 MAFKO60675 156 aa6.81□□□□□ -1.32
CPSF6-206ENST00000550987 AMY2AP04746 511 aa6.81□□□□□ -1.32
CPSF6-206ENST00000550987 ZBTB48P10074 688 aaPredicted RBP6.81□□□□□ -1.32
CPSF6-206ENST00000550987 AMY2BP19961 511 aa6.81□□□□□ -1.32
CPSF6-206ENST00000550987 RHBDL3P58872 404 aa6.81□□□□□ -1.32
CPSF6-206ENST00000550987 RTP1P59025 263 aa6.81□□□□□ -1.32
CPSF6-206ENST00000550987 MROH9Q5TGP6 573 aa6.81□□□□□ -1.32
CPSF6-206ENST00000550987 ANGEL2Q5VTE6 544 aaKnown RBP6.81□□□□□ -1.32
CPSF6-206ENST00000550987 CXorf57Q6NSI4 855 aaKnown RBP6.81□□□□□ -1.32
CPSF6-206ENST00000550987 HHIPL2Q6UWX4 724 aa6.81□□□□□ -1.32
CPSF6-206ENST00000550987 NLRP10Q86W26 655 aa6.81□□□□□ -1.32
CPSF6-206ENST00000550987 TPH2Q8IWU9 490 aa6.81□□□□□ -1.32
CPSF6-206ENST00000550987 MAGEB6Q8N7X4 407 aa6.81□□□□□ -1.32
CPSF6-206ENST00000550987 C1orf162Q8NEQ5 155 aaPredicted RBP6.81□□□□□ -1.32
CPSF6-206ENST00000550987 PMM1Q92871 262 aa6.81□□□□□ -1.32
CPSF6-206ENST00000550987 MAP6Q96JE9 813 aa6.81□□□□□ -1.32
CPSF6-206ENST00000550987 JMJD8Q96S16 334 aa6.81□□□□□ -1.32
CPSF6-206ENST00000550987 RCAN3Q9UKA8 241 aa6.81□□□□□ -1.32
CPSF6-206ENST00000550987 X6R8D5 127 aa6.81□□□□□ -1.32
CPSF6-206ENST00000550987 NEXMIFQ5QGS0 1516 aa6.81□□□□□ -1.32
CPSF6-206ENST00000550987 MYOM2P54296 1465 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 FADS2P1A8MWK0 482 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 PLXNC1O60486 1568 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 PPP1R11O60927 126 aaPredicted RBP6.8□□□□□ -1.32
CPSF6-206ENST00000550987 IL33O95760 270 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 CYP17A1P05093 508 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 SMAD3P84022 425 aaKnown RBP6.8□□□□□ -1.32
CPSF6-206ENST00000550987 PRKCQQ04759 706 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 SMAD2Q15796 467 aaKnown RBP6.8□□□□□ -1.32
CPSF6-206ENST00000550987 INAVAQ3KP66 663 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 MINDY4Q4G0A6 757 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 EFCAB2Q5VUJ9 269 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 CPZQ66K79 652 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 TTLL7Q6ZT98 887 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 CEP128Q6ZU80 1094 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 FRMD7Q6ZUT3 714 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 CPA6Q8N4T0 437 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 ZNF610Q8N9Z0 462 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 DDX17Q92841 729 aaKnown RBP6.8□□□□□ -1.32
CPSF6-206ENST00000550987 HHIPL1Q96JK4 782 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 MIA2Q96PC5 1412 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 SLC6A20Q9NP91 592 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 TPSG1Q9NRR2 321 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 TOPORSQ9NS56 1045 aaPredicted RBP6.8□□□□□ -1.32
CPSF6-206ENST00000550987 VAV3Q9UKW4 847 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 INVSQ9Y283 1065 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 ATP23Q9Y6H3 246 aa6.8□□□□□ -1.32
CPSF6-206ENST00000550987 MYO5CQ9NQX4 1742 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 VCANP13611 3396 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 LOC102724159A0A0B4J2E5 919 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 TCRBV5S4A2TA0A5A2 114 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 MAN2B1O00754 1011 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 PRPF3O43395 683 aaKnown RBP6.79□□□□□ -1.32
CPSF6-206ENST00000550987 RBP3P10745 1247 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 FOSL1P15407 271 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 VCAM1P19320 739 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 CD40P25942 277 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 CYP2C19P33261 490 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 PHC1P78364 1004 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 UBE4AQ14139 1066 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 BRD3Q15059 726 aa6.79□□□□□ -1.32
CPSF6-206ENST00000550987 PWP2Q15269 919 aaKnown RBP6.79□□□□□ -1.32
CPSF6-206ENST00000550987 CREB3L3Q68CJ9 461 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms