RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 TRAPPC12Q8WVT3 735 aa22.52■■□□□ 1.2
GCN1-207ENST00000550471 MRPL38Q96DV4 380 aaKnown RBP22.52■■□□□ 1.2
GCN1-207ENST00000550471 MAP7D2Q96T17 732 aa22.52■■□□□ 1.2
GCN1-207ENST00000550471 PLVAPQ9BX97 442 aa22.52■■□□□ 1.2
GCN1-207ENST00000550471 LMAN2LQ9H0V9 348 aa22.52■■□□□ 1.2
GCN1-207ENST00000550471 C1orf112Q9NSG2 853 aa22.52■■□□□ 1.2
GCN1-207ENST00000550471 GABBR1Q9UBS5 961 aa22.52■■□□□ 1.2
GCN1-207ENST00000550471 MTUS1Q9ULD2 1270 aa22.52■■□□□ 1.2
GCN1-207ENST00000550471 PADI3Q9ULW8 664 aa22.52■■□□□ 1.2
GCN1-207ENST00000550471 ADGRA3Q8IWK6 1321 aa22.52■■□□□ 1.2
GCN1-207ENST00000550471 SIP14410 1827 aa22.52■■□□□ 1.2
GCN1-207ENST00000550471 M0R2N6 131 aa22.51■■□□□ 1.19
GCN1-207ENST00000550471 CRYBB1P53674 252 aaPredicted RBP22.51■■□□□ 1.19
GCN1-207ENST00000550471 NAALADL2Q58DX5 795 aa22.51■■□□□ 1.19
GCN1-207ENST00000550471 KIAA0319LQ8IZA0 1049 aa22.51■■□□□ 1.19
GCN1-207ENST00000550471 C17orf80Q9BSJ5 609 aa22.51■■□□□ 1.19
GCN1-207ENST00000550471 C11orf84Q9BUA3 381 aaPredicted RBP22.51■■□□□ 1.19
GCN1-207ENST00000550471 OSBPL7Q9BZF2 842 aa22.51■■□□□ 1.19
GCN1-207ENST00000550471 AGO3Q9H9G7 860 aaKnown RBP22.51■■□□□ 1.19
GCN1-207ENST00000550471 CCDC194A0A1B0GVG4 234 aa22.5■■□□□ 1.19
GCN1-207ENST00000550471 TNFRSF10AO00220 468 aa22.5■■□□□ 1.19
GCN1-207ENST00000550471 NCK2O43639 380 aa22.5■■□□□ 1.19
GCN1-207ENST00000550471 DKC1O60832 514 aaKnown RBP eCLIP22.5■■□□□ 1.19
GCN1-207ENST00000550471 RPS6KA5O75582 802 aa22.5■■□□□ 1.19
GCN1-207ENST00000550471 C22orf31O95567 290 aa22.5■■□□□ 1.19
GCN1-207ENST00000550471 ATP4AP20648 1035 aa22.5■■□□□ 1.19
GCN1-207ENST00000550471 SCRN1Q12765 414 aa22.5■■□□□ 1.19
GCN1-207ENST00000550471 CMTR2Q8IYT2 770 aaKnown RBP22.5■■□□□ 1.19
GCN1-207ENST00000550471 CLP1Q92989 425 aaKnown RBP22.5■■□□□ 1.19
GCN1-207ENST00000550471 ZNF689Q96CS4 500 aaPredicted RBP22.5■■□□□ 1.19
GCN1-207ENST00000550471 MBOAT7Q96N66 472 aa22.5■■□□□ 1.19
GCN1-207ENST00000550471 PHF20Q9BVI0 1012 aa22.5■■□□□ 1.19
GCN1-207ENST00000550471 BRMS1Q9HCU9 246 aa22.5■■□□□ 1.19
GCN1-207ENST00000550471 UNC80Q8N2C7 3258 aa22.49■■□□□ 1.19
GCN1-207ENST00000550471 ZBTB42B2RXF5 422 aa22.49■■□□□ 1.19
GCN1-207ENST00000550471 PPFIA3O75145 1194 aa22.49■■□□□ 1.19
GCN1-207ENST00000550471 PSMD10O75832 226 aa22.49■■□□□ 1.19
GCN1-207ENST00000550471 DGKIO75912 1065 aa22.49■■□□□ 1.19
GCN1-207ENST00000550471 OATP04181 439 aa22.49■■□□□ 1.19
GCN1-207ENST00000550471 BMPR1AP36894 532 aa22.49■■□□□ 1.19
GCN1-207ENST00000550471 GPM6BQ13491 265 aa22.49■■□□□ 1.19
GCN1-207ENST00000550471 BTG3Q14201 252 aaPredicted RBP22.49■■□□□ 1.19
GCN1-207ENST00000550471 ADAMTS19Q8TE59 1207 aa22.49■■□□□ 1.19
GCN1-207ENST00000550471 FAM20AQ96MK3 541 aa22.49■■□□□ 1.19
GCN1-207ENST00000550471 RC3H2Q9HBD1 1191 aaKnown RBP22.49■■□□□ 1.19
GCN1-207ENST00000550471 LRFN2Q9ULH4 789 aa22.49■■□□□ 1.19
GCN1-207ENST00000550471 MYH9P35579 1960 aaKnown RBP22.49■■□□□ 1.19
GCN1-207ENST00000550471 TTC3P53804 2025 aa22.48■■□□□ 1.19
GCN1-207ENST00000550471 CHD7Q9P2D1 2997 aa22.48■■□□□ 1.19
GCN1-207ENST00000550471 ADAMTS3O15072 1205 aa22.48■■□□□ 1.19
GCN1-207ENST00000550471 TMEM62Q0P6H9 643 aa22.48■■□□□ 1.19
GCN1-207ENST00000550471 PPP4R3AQ6IN85 833 aa22.48■■□□□ 1.19
GCN1-207ENST00000550471 MIER3Q7Z3K6 550 aa22.48■■□□□ 1.19
GCN1-207ENST00000550471 EXOC8Q8IYI6 725 aa22.48■■□□□ 1.19
GCN1-207ENST00000550471 METTL13Q8N6R0 699 aa22.48■■□□□ 1.19
GCN1-207ENST00000550471 UHRF1Q96T88 793 aaPredicted RBP22.48■■□□□ 1.19
GCN1-207ENST00000550471 DDX25Q9UHL0 483 aaKnown RBP22.48■■□□□ 1.19
GCN1-207ENST00000550471 TPCN1Q9ULQ1 816 aa22.48■■□□□ 1.19
GCN1-207ENST00000550471 TTC28Q96AY4 2481 aa22.48■■□□□ 1.19
GCN1-207ENST00000550471 TBX3O15119 743 aa22.47■■□□□ 1.19
GCN1-207ENST00000550471 CTNNB1P35222 781 aa22.47■■□□□ 1.19
GCN1-207ENST00000550471 SARSP49591 514 aaKnown RBP22.47■■□□□ 1.19
GCN1-207ENST00000550471 NFX1Q12986 1120 aaKnown RBP22.47■■□□□ 1.19
GCN1-207ENST00000550471 XKR3Q5GH77 459 aa22.47■■□□□ 1.19
GCN1-207ENST00000550471 SPRED2Q7Z698 418 aa22.47■■□□□ 1.19
GCN1-207ENST00000550471 NEK8Q86SG6 692 aa22.47■■□□□ 1.19
GCN1-207ENST00000550471 P2RX5Q93086 422 aa22.47■■□□□ 1.19
GCN1-207ENST00000550471 JPH2Q9BR39 696 aaPredicted RBP22.47■■□□□ 1.19
GCN1-207ENST00000550471 ERVK-5Q9HDB9 667 aa22.47■■□□□ 1.19
GCN1-207ENST00000550471 PPME1Q9Y570 386 aa22.47■■□□□ 1.19
GCN1-207ENST00000550471 RALGAPA2Q2PPJ7 1873 aa22.46■■□□□ 1.19
GCN1-207ENST00000550471 DENND3A2RUS2 1198 aa22.46■■□□□ 1.19
GCN1-207ENST00000550471 BMP1P13497 986 aa22.46■■□□□ 1.19
GCN1-207ENST00000550471 PRKCEQ02156 737 aa22.46■■□□□ 1.19
GCN1-207ENST00000550471 NPY5RQ15761 445 aa22.46■■□□□ 1.19
GCN1-207ENST00000550471 PUS10Q3MIT2 529 aaKnown RBP22.46■■□□□ 1.19
GCN1-207ENST00000550471 KRT40Q6A162 431 aa22.46■■□□□ 1.19
GCN1-207ENST00000550471 EFCAB12Q6NXP0 572 aa22.46■■□□□ 1.19
GCN1-207ENST00000550471 SLC24A5Q71RS6 500 aa22.46■■□□□ 1.19
GCN1-207ENST00000550471 CRIPAKQ8N1N5 446 aa22.46■■□□□ 1.19
GCN1-207ENST00000550471 ZBTB10Q96DT7 871 aa22.46■■□□□ 1.19
GCN1-207ENST00000550471 LARP6Q9BRS8 491 aaKnown RBP22.46■■□□□ 1.19
GCN1-207ENST00000550471 UNC45AQ9H3U1 944 aa22.46■■□□□ 1.19
GCN1-207ENST00000550471 RGS18Q9NS28 235 aa22.46■■□□□ 1.19
GCN1-207ENST00000550471 ORC3Q9UBD5 711 aaPredicted RBP22.46■■□□□ 1.19
GCN1-207ENST00000550471 GINS2Q9Y248 185 aa22.46■■□□□ 1.19
GCN1-207ENST00000550471 PCDHB7Q9Y5E2 793 aa22.46■■□□□ 1.19
GCN1-207ENST00000550471 COL4A4P53420 1690 aaPredicted RBP22.46■■□□□ 1.19
GCN1-207ENST00000550471 EDIL3O43854 480 aa22.45■■□□□ 1.18
GCN1-207ENST00000550471 DNM2P50570 870 aa22.45■■□□□ 1.18
GCN1-207ENST00000550471 AK2P54819 239 aa22.45■■□□□ 1.18
GCN1-207ENST00000550471 TBC1D8BQ0IIM8 1120 aa22.45■■□□□ 1.18
GCN1-207ENST00000550471 B3GNT9Q6UX72 402 aa22.45■■□□□ 1.18
GCN1-207ENST00000550471 ETNPPLQ8TBG4 499 aa22.45■■□□□ 1.18
GCN1-207ENST00000550471 RSPH1Q8WYR4 309 aa22.45■■□□□ 1.18
GCN1-207ENST00000550471 PPP2R3CQ969Q6 453 aa22.45■■□□□ 1.18
GCN1-207ENST00000550471 NIFKQ9BYG3 293 aaKnown RBP22.45■■□□□ 1.18
GCN1-207ENST00000550471 NSUN3Q9H649 340 aaKnown RBP22.45■■□□□ 1.18
GCN1-207ENST00000550471 ELAC1Q9H777 363 aaKnown RBP22.45■■□□□ 1.18
GCN1-207ENST00000550471 AKT3Q9Y243 479 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms