RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 MPIG6BO95866 241 aa4.22□□□□□ -1.73
CCNT1-203ENST00000550457 TGM1P22735 817 aa4.22□□□□□ -1.73
CCNT1-203ENST00000550457 PTGS1P23219 599 aa4.22□□□□□ -1.73
CCNT1-203ENST00000550457 ACRV1P26436 265 aa4.22□□□□□ -1.73
CCNT1-203ENST00000550457 MC4RP32245 332 aa4.22□□□□□ -1.73
CCNT1-203ENST00000550457 KCNQ1P51787 676 aa4.22□□□□□ -1.73
CCNT1-203ENST00000550457 IRX6P78412 446 aaPredicted RBP4.22□□□□□ -1.73
CCNT1-203ENST00000550457 DPTQ07507 201 aa4.22□□□□□ -1.73
CCNT1-203ENST00000550457 GNL2Q13823 731 aaKnown RBP4.22□□□□□ -1.73
CCNT1-203ENST00000550457 GPR19Q15760 415 aa4.22□□□□□ -1.73
CCNT1-203ENST00000550457 ZMAT1Q5H9K5 638 aa4.22□□□□□ -1.73
CCNT1-203ENST00000550457 DPP8Q6V1X1 898 aaPredicted RBP4.22□□□□□ -1.73
CCNT1-203ENST00000550457 OSTM1Q86WC4 334 aa4.22□□□□□ -1.73
CCNT1-203ENST00000550457 PTRH1Q86Y79 214 aaKnown RBP4.22□□□□□ -1.73
CCNT1-203ENST00000550457 ST13P5Q8NFI4 369 aaPredicted RBP4.22□□□□□ -1.73
CCNT1-203ENST00000550457 PCDH19Q8TAB3 1148 aa4.22□□□□□ -1.73
CCNT1-203ENST00000550457 SCYL1Q96KG9 808 aa4.22□□□□□ -1.73
CCNT1-203ENST00000550457 C12orf65Q9H3J6 166 aaKnown RBP4.22□□□□□ -1.73
CCNT1-203ENST00000550457 INCENPQ9NQS7 918 aa4.22□□□□□ -1.73
CCNT1-203ENST00000550457 HECAQ9UBI9 543 aaPredicted RBP4.22□□□□□ -1.73
CCNT1-203ENST00000550457 CDC42EP3Q9UKI2 254 aa4.22□□□□□ -1.73
CCNT1-203ENST00000550457 CBLCQ9ULV8 474 aa4.22□□□□□ -1.73
CCNT1-203ENST00000550457 R3HCC1Q9Y3T6 440 aaKnown RBP4.22□□□□□ -1.73
CCNT1-203ENST00000550457 INSRP06213 1382 aa4.22□□□□□ -1.73
CCNT1-203ENST00000550457 WDR33Q9C0J8 1336 aaKnown RBP4.21□□□□□ -1.73
CCNT1-203ENST00000550457 EIF5BO60841 1220 aaKnown RBP4.21□□□□□ -1.74
CCNT1-203ENST00000550457 C4BPAP04003 597 aaKnown RBP4.21□□□□□ -1.74
CCNT1-203ENST00000550457 HMGCRP04035 888 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 PDE6AP16499 860 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 AOAHP28039 575 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 DNAJA1P31689 397 aaKnown RBP4.21□□□□□ -1.74
CCNT1-203ENST00000550457 MCM7P33993 719 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 JAM2P57087 298 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 PAK1Q13153 545 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 FAM50AQ14320 339 aaKnown RBP4.21□□□□□ -1.74
CCNT1-203ENST00000550457 EIF4HQ15056 248 aaKnown RBP4.21□□□□□ -1.74
CCNT1-203ENST00000550457 PCOLCEQ15113 449 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 SEC23AQ15436 765 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 STILQ15468 1287 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 SMN1Q16637 294 aaKnown RBP4.21□□□□□ -1.74
CCNT1-203ENST00000550457 TRIM68Q6AZZ1 485 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 LRSAM1Q6UWE0 723 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 GPR135Q8IZ08 494 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 NLGN4XQ8N0W4 816 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 FAM89AQ96GI7 184 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 PKNOX2Q96KN3 472 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 PLEKHG4BQ96PX9 1271 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 CEP89Q96ST8 783 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 AMNQ9BXJ7 453 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 GALNT8Q9NY28 637 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 PCDHA8Q9Y5H6 950 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 ATP23Q9Y6H3 246 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 PHLDB1Q86UU1 1377 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 CCDC7Q96M83 1385 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 FMN1Q68DA7 1419 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 AKNAQ7Z591 1439 aa4.21□□□□□ -1.74
CCNT1-203ENST00000550457 FYCO1Q9BQS8 1478 aa4.2□□□□□ -1.74
CCNT1-203ENST00000550457 ROCK2O75116 1388 aaKnown RBP4.2□□□□□ -1.74
CCNT1-203ENST00000550457 KCNK3O14649 394 aa4.2□□□□□ -1.74
CCNT1-203ENST00000550457 U2SURPO15042 1029 aaKnown RBP4.2□□□□□ -1.74
CCNT1-203ENST00000550457 RRP9O43818 475 aaKnown RBP4.2□□□□□ -1.74
CCNT1-203ENST00000550457 ADCY3O60266 1144 aa4.2□□□□□ -1.74
CCNT1-203ENST00000550457 C6orf222P0C671 652 aaPredicted RBP4.2□□□□□ -1.74
CCNT1-203ENST00000550457 HSPA5P11021 654 aaKnown RBP4.2□□□□□ -1.74
CCNT1-203ENST00000550457 PYGMP11217 842 aa4.2□□□□□ -1.74
CCNT1-203ENST00000550457 MSX2P35548 267 aaPredicted RBP4.2□□□□□ -1.74
CCNT1-203ENST00000550457 INHBEP58166 350 aa4.2□□□□□ -1.74
CCNT1-203ENST00000550457 CD83Q01151 205 aa4.2□□□□□ -1.74
CCNT1-203ENST00000550457 HGFACQ04756 655 aa4.2□□□□□ -1.74
CCNT1-203ENST00000550457 FIGNQ5HY92 759 aa4.2□□□□□ -1.74
CCNT1-203ENST00000550457 L1TD1Q5T7N2 865 aaKnown RBP4.2□□□□□ -1.74
CCNT1-203ENST00000550457 USP30Q70CQ3 517 aa4.2□□□□□ -1.74
CCNT1-203ENST00000550457 CXXC5Q7LFL8 322 aaKnown RBP4.2□□□□□ -1.74
CCNT1-203ENST00000550457 NEU4Q8WWR8 484 aaPredicted RBP4.2□□□□□ -1.74
CCNT1-203ENST00000550457 WNK4Q96J92 1243 aa4.2□□□□□ -1.74
CCNT1-203ENST00000550457 SMURF1Q9HCE7 757 aa4.2□□□□□ -1.74
CCNT1-203ENST00000550457 TLR9Q9NR96 1032 aa4.2□□□□□ -1.74
CCNT1-203ENST00000550457 CATSPERZQ9NTU4 200 aa4.2□□□□□ -1.74
CCNT1-203ENST00000550457 PLA2G3Q9NZ20 509 aa4.2□□□□□ -1.74
CCNT1-203ENST00000550457 PUF60Q9UHX1 559 aaKnown RBP4.2□□□□□ -1.74
CCNT1-203ENST00000550457 CASKIN1Q8WXD9 1431 aa4.2□□□□□ -1.74
CCNT1-203ENST00000550457 MIA2Q96PC5 1412 aa4.2□□□□□ -1.74
CCNT1-203ENST00000550457 ATAD2BQ9ULI0 1458 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 ZNF561-AS1K7EIQ3 104 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 ARVCFO00192 962 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 TCF3P15923 654 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 KRT15P19012 456 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 RPS19P39019 145 aaKnown RBP4.19□□□□□ -1.74
CCNT1-203ENST00000550457 MRE11P49959 708 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 TM4SF20Q53R12 229 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 FOXB2Q5VYV0 432 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 KANK2Q63ZY3 851 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 FSTL4Q6MZW2 842 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 SPATC1Q76KD6 591 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 FILIP1Q7Z7B0 1213 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 MTDHQ86UE4 582 aaKnown RBP4.19□□□□□ -1.74
CCNT1-203ENST00000550457 LDLRAD3Q86YD5 345 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 LRRC47Q8N1G4 583 aaKnown RBP4.19□□□□□ -1.74
CCNT1-203ENST00000550457 OR14K1Q8NGZ2 314 aa4.19□□□□□ -1.74
CCNT1-203ENST00000550457 LARP4BQ92615 738 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms