RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 USP17L3A6NCW0 530 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 USP17L4A6NCW7 530 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 SPDYE5A6NIY4 337 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 FLOT1O75955 427 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 RANBP1P43487 201 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 CCDC6Q16204 474 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 AADACL2Q6P093 401 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 TAOK1Q7L7X3 1001 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 USP17L1Q7RTZ2 530 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 TPCN2Q8NHX9 752 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 ATXN2LQ8WWM7 1075 aaKnown RBP13.13□□□□□ -0.31
VDR-208ENST00000550325 RNF25Q96BH1 459 aaPredicted RBP13.13□□□□□ -0.31
VDR-208ENST00000550325 BMP2KQ9NSY1 1161 aaPredicted RBP13.13□□□□□ -0.31
VDR-208ENST00000550325 TMEM260Q9NX78 707 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 ASAP1Q9ULH1 1129 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 RTCBQ9Y3I0 505 aaKnown RBP13.13□□□□□ -0.31
VDR-208ENST00000550325 SNX3O60493 162 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 STARD3NLO95772 234 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 MYBP10242 640 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 RIPK1Q13546 671 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 TNIP1Q15025 636 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 CALCRLQ16602 461 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 KRT79Q5XKE5 535 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 PIGWQ7Z7B1 504 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 GUF1Q8N442 669 aaKnown RBP13.13□□□□□ -0.31
VDR-208ENST00000550325 TMEM237Q96Q45 408 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 MTA3Q9BTC8 594 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 PIDD1Q9HB75 910 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 KLHL14Q9P2G3 628 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 MTRF1LQ9UGC7 380 aaKnown RBP13.13□□□□□ -0.31
VDR-208ENST00000550325 GFPT2O94808 682 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 CREB1P16220 341 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 STX2P32856 288 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 BLMHQ13867 455 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 MUM1Q2TAK8 710 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 TMEM154Q6P9G4 183 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 GJB7Q6PEY0 223 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 LRRC55Q6ZSA7 311 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 SEPT14Q6ZU15 432 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 TLCD1Q96CP7 247 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 DYNLL2Q96FJ2 89 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 NGLY1Q96IV0 654 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 TRIM4Q9C037 500 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 PABPC3Q9H361 631 aaKnown RBP13.12□□□□□ -0.31
VDR-208ENST00000550325 SLITRK6Q9H5Y7 841 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 HOMER3Q9NSC5 361 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 TMEM59LQ9UK28 342 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 NPHP3-ACAD11A0A0J9YXS1 232 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 KCNH2Q12809 1159 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 FAM26FQ5R3K3 315 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 NEK8Q86SG6 692 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 DLGAP2Q9P1A6 1054 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 RASAL2Q9UJF2 1139 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 ZMYND8Q9ULU4 1186 aaPredicted RBP13.12□□□□□ -0.31
VDR-208ENST00000550325 FLT1P17948 1338 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 ICA1Q05084 483 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 UBE4AQ14139 1066 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 C6orf118Q5T5N4 469 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 SPATA21Q7Z572 469 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.12□□□□□ -0.31
VDR-208ENST00000550325 NAGPAQ9UK23 515 aa13.12□□□□□ -0.31
VDR-208ENST00000550325 UBR1Q8IWV7 1749 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 DISP2A7MBM2 1401 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 TMEM120BA0PK00 339 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 SEMA3FQ13275 785 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 BARGINQ6ZT62 677 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 C18orf8Q96DM3 657 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 AK8Q96MA6 479 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 NUDT12Q9BQG2 462 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 MAGEF1Q9HAY2 307 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 NKX1-2Q9UD57 310 aaPredicted RBP13.11□□□□□ -0.31
VDR-208ENST00000550325 CHORDC1Q9UHD1 332 aaPredicted RBP13.11□□□□□ -0.31
VDR-208ENST00000550325 ADAMTSL3P82987 1691 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 MMP13P45452 471 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 TNNI2P48788 182 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 CCDC105Q8IYK2 499 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 ARHGEF2Q92974 986 aaKnown RBP13.11□□□□□ -0.31
VDR-208ENST00000550325 MYH2Q9UKX2 1941 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 RBAK-RBAKDNI3L0D1 243 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 USP17L8P0C7I0 530 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 TSPY3P0CV98 308 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 TSPY8P0CW00 308 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 TARSP26639 723 aaKnown RBP13.11□□□□□ -0.31
VDR-208ENST00000550325 GRB10Q13322 594 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 FITM2Q8N6M3 262 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 MRRFQ96E11 262 aaKnown RBP13.11□□□□□ -0.31
VDR-208ENST00000550325 NUDCD1Q96RS6 583 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 ERP44Q9BS26 406 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 PLA2G12BQ9BX93 195 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 FGFBP2Q9BYJ0 223 aa13.11□□□□□ -0.31
VDR-208ENST00000550325 STMN4Q9H169 189 aaPredicted RBP13.11□□□□□ -0.31
VDR-208ENST00000550325 ZNF142P52746 1687 aaPredicted RBP13.11□□□□□ -0.31
VDR-208ENST00000550325 CLSTN1O94985 981 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 ERFP50548 548 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 COASYQ13057 564 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 KCNK18Q7Z418 384 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 TGS1Q96RS0 853 aaKnown RBP13.1□□□□□ -0.31
VDR-208ENST00000550325 ERVK-5Q9HDB9 667 aa13.1□□□□□ -0.31
VDR-208ENST00000550325 SEC63Q9UGP8 760 aaKnown RBP13.1□□□□□ -0.31
VDR-208ENST00000550325 FGFR2P21802 821 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms