RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, human

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARFGAP1-223	ENST00000550188	PSMC5	P62195	406 aa		13.42	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	DEFB103A	P81534	67 aa		13.42	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	ORC2	Q13416	577 aa	Predicted RBP	13.42	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	CUL4A	Q13619	759 aa		13.42	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	LPIN1	Q14693	890 aa		13.42	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	XKR3	Q5GH77	459 aa		13.42	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	FBXO47	Q5MNV8	452 aa		13.42	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	TSHZ1	Q6ZSZ6	1077 aa		13.42	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	USP38	Q8NB14	1042 aa		13.42	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	BANK1	Q8NDB2	785 aa		13.42	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	OSBPL7	Q9BZF2	842 aa		13.42	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	SEMA6B	Q9H3T3	888 aa		13.42	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	ZNF576	Q9H609	170 aa		13.42	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	YBX2	Q9Y2T7	364 aa	Known RBP	13.42	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	RBM19	Q9Y4C8	960 aa	Known RBP	13.42	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	SQOR	Q9Y6N5	450 aa		13.42	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	KDM3A	Q9Y4C1	1321 aa		13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	KIF28P	B7ZC32	967 aa		13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	WNT7A	O00755	349 aa		13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	AMH	P03971	560 aa		13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	P4HB	P07237	508 aa	Known RBP	13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	ATP2B1	P20020	1258 aa		13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	PDC	P20941	246 aa		13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	U2AF2	P26368	475 aa	Known RBP eCLIP	13.41	□□□□□ -0.26	3e-6	■■□□□ 12.8
ARFGAP1-223	ENST00000550188	GJB2	P29033	226 aa		13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	MCM7	P33993	719 aa		13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	QARS	P47897	775 aa	Known RBP	13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	TRAPPC10	P48553	1259 aa		13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	SPIRE1	Q08AE8	756 aa		13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	TMEM62	Q0P6H9	643 aa		13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	MKRN4P	Q13434	485 aa	Predicted RBP	13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	EPHA7	Q15375	998 aa		13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	NCAPH2	Q6IBW4	605 aa		13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	KIAA0319L	Q8IZA0	1049 aa		13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	METTL13	Q8N6R0	699 aa		13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	GUCD1	Q96NT3	240 aa		13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	NIFK	Q9BYG3	293 aa	Known RBP	13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	CELF4	Q9BZC1	486 aa	Known RBP	13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	NKX2-4	Q9H2Z4	354 aa		13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	SLC28A3	Q9HAS3	691 aa		13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	NOL7	Q9UMY1	257 aa	Known RBP	13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	PCDHA12	Q9UN75	941 aa		13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	SMC3	Q9UQE7	1217 aa		13.41	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	TLL1	O43897	1013 aa		13.4	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	STBD1	O95210	358 aa		13.4	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	TMOD1	P28289	359 aa		13.4	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	TBC1D8B	Q0IIM8	1120 aa		13.4	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	TARBP2	Q15633	366 aa	Known RBP	13.4	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	TTC38	Q5R3I4	469 aa		13.4	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	PPP2R2D	Q66LE6	453 aa		13.4	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	MTMR9	Q96QG7	549 aa		13.4	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	MAP7D2	Q96T17	732 aa		13.4	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	LXN	Q9BS40	222 aa		13.4	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	ZBED2	Q9BTP6	218 aa		13.4	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	TTC12	Q9H892	705 aa	Predicted RBP	13.4	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	SCN5A	Q14524	2016 aa		13.4	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	SZT2	Q5T011	3432 aa		13.4	□□□□□ -0.26
ARFGAP1-223	ENST00000550188	DDX11L8	A8MPP1	907 aa		13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188		H3BQV1	296 aa		13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	GJB5	O95377	273 aa		13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	CA3	P07451	260 aa		13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	MYOG	P15173	224 aa		13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	CD52	P31358	61 aa		13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	TXK	P42681	527 aa		13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	CLCN3	P51790	818 aa		13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	PAK2	Q13177	524 aa		13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	MTERF2	Q49AM1	385 aa		13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	EFCAB12	Q6NXP0	572 aa		13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	ANO5	Q75V66	913 aa		13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	C4orf19	Q8IY42	314 aa		13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	MYOCD	Q8IZQ8	938 aa		13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	ZNF710	Q8N1W2	664 aa		13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	LINC01465	Q8N7H1	131 aa		13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	NEK9	Q8TD19	979 aa		13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	CDX2	Q99626	313 aa	Predicted RBP	13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	AGO3	Q9H9G7	860 aa	Known RBP	13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	AKT3	Q9Y243	479 aa		13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	GINS2	Q9Y248	185 aa		13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	STXBP5L	Q9Y2K9	1186 aa		13.39	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	TMEM150B	A6NC51	233 aa		13.38	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	RBAK-RBAKDN	I3L0D1	243 aa		13.38	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	VTN	P04004	478 aa		13.38	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	CRYBB1	P53674	252 aa	Predicted RBP	13.38	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	GRIN2C	Q14957	1233 aa		13.38	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	ZNF174	Q15697	407 aa		13.38	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	KIZ	Q2M2Z5	673 aa		13.38	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	MCTP1	Q6DN14	999 aa		13.38	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.38	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	LRRC71	Q8N4P6	559 aa		13.38	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	DYDC2	Q96IM9	177 aa		13.38	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	RAD9A	Q99638	391 aa		13.38	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.38	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	JPH2	Q9BR39	696 aa	Predicted RBP	13.38	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	FTHL17	Q9BXU8	183 aa		13.38	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	TMEM60	Q9H2L4	133 aa		13.38	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	ZSWIM4	Q9H7M6	989 aa		13.38	□□□□□ -0.27
ARFGAP1-223	ENST00000550188	SUGCT	Q9HAC7	445 aa		13.38	□□□□□ -0.27

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