RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 IL17AQ16552 155 aa21.68■■□□□ 1.06
DDX54-207ENST00000550016 FAM26DQ5JW98 314 aa21.68■■□□□ 1.06
DDX54-207ENST00000550016 ARL6IP4Q66PJ3 421 aaKnown RBP21.68■■□□□ 1.06
DDX54-207ENST00000550016 ANO5Q75V66 913 aa21.68■■□□□ 1.06
DDX54-207ENST00000550016 C16orf59Q7L2K0 433 aa21.68■■□□□ 1.06
DDX54-207ENST00000550016 OTUD6AQ7L8S5 288 aa21.68■■□□□ 1.06
DDX54-207ENST00000550016 NME8Q8N427 588 aa21.68■■□□□ 1.06
DDX54-207ENST00000550016 IGSF22Q8N9C0 903 aa21.68■■□□□ 1.06
DDX54-207ENST00000550016 POLR3CQ9BUI4 534 aaPredicted RBP21.68■■□□□ 1.06
DDX54-207ENST00000550016 FAM49AQ9H0Q0 323 aaPredicted RBP21.68■■□□□ 1.06
DDX54-207ENST00000550016 TUFT1Q9NNX1 390 aa21.68■■□□□ 1.06
DDX54-207ENST00000550016 LRWD1Q9UFC0 647 aa21.68■■□□□ 1.06
DDX54-207ENST00000550016 TRIOBPQ9H2D6 2365 aa21.67■■□□□ 1.06
DDX54-207ENST00000550016 TMEM150BA6NC51 233 aa21.67■■□□□ 1.06
DDX54-207ENST00000550016 PFKMP08237 780 aa21.67■■□□□ 1.06
DDX54-207ENST00000550016 ACRP10323 421 aa21.67■■□□□ 1.06
DDX54-207ENST00000550016 SF3A1Q15459 793 aaKnown RBP21.67■■□□□ 1.06
DDX54-207ENST00000550016 MTERF2Q49AM1 385 aa21.67■■□□□ 1.06
DDX54-207ENST00000550016 TMEM240Q5SV17 173 aa21.67■■□□□ 1.06
DDX54-207ENST00000550016 FAM173BQ6P4H8 233 aa21.67■■□□□ 1.06
DDX54-207ENST00000550016 DEFB128Q7Z7B8 93 aa21.67■■□□□ 1.06
DDX54-207ENST00000550016 TDHQ8IZJ6 230 aa21.67■■□□□ 1.06
DDX54-207ENST00000550016 STK24Q9Y6E0 443 aa21.67■■□□□ 1.06
DDX54-207ENST00000550016 SPATA31C1P0DKV0 1188 aa21.66■■□□□ 1.06
DDX54-207ENST00000550016 RPA1P27694 616 aa21.66■■□□□ 1.06
DDX54-207ENST00000550016 YWHABP31946 246 aaKnown RBP21.66■■□□□ 1.06
DDX54-207ENST00000550016 TBC1D8BQ0IIM8 1120 aa21.66■■□□□ 1.06
DDX54-207ENST00000550016 SHHQ15465 462 aa21.66■■□□□ 1.06
DDX54-207ENST00000550016 EFCAB12Q6NXP0 572 aa21.66■■□□□ 1.06
DDX54-207ENST00000550016 PSRC1Q6PGN9 363 aaPredicted RBP21.66■■□□□ 1.06
DDX54-207ENST00000550016 ZNF365Q70YC5 407 aa21.66■■□□□ 1.06
DDX54-207ENST00000550016 CATSPER3Q86XQ3 398 aa21.66■■□□□ 1.06
DDX54-207ENST00000550016 KIAA0319LQ8IZA0 1049 aa21.66■■□□□ 1.06
DDX54-207ENST00000550016 METTL13Q8N6R0 699 aa21.66■■□□□ 1.06
DDX54-207ENST00000550016 VWCEQ96DN2 955 aa21.66■■□□□ 1.06
DDX54-207ENST00000550016 CEP89Q96ST8 783 aa21.66■■□□□ 1.06
DDX54-207ENST00000550016 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.66■■□□□ 1.062e-8■■□□□ 11.7
DDX54-207ENST00000550016 CYP26B1Q9NR63 512 aa21.66■■□□□ 1.06
DDX54-207ENST00000550016 NBNO60934 754 aa21.65■■□□□ 1.06
DDX54-207ENST00000550016 MED24O75448 989 aa21.65■■□□□ 1.06
DDX54-207ENST00000550016 FGBP02675 491 aa21.65■■□□□ 1.06
DDX54-207ENST00000550016 CHRNA1P02708 482 aa21.65■■□□□ 1.06
DDX54-207ENST00000550016 CTSHP09668 335 aa21.65■■□□□ 1.06
DDX54-207ENST00000550016 XRCC6P12956 609 aaKnown RBP eCLIP21.65■■□□□ 1.06
DDX54-207ENST00000550016 MRPS6P82932 125 aaKnown RBP21.65■■□□□ 1.06
DDX54-207ENST00000550016 MBTPS1Q14703 1052 aa21.65■■□□□ 1.06
DDX54-207ENST00000550016 GPNMBQ14956 572 aa21.65■■□□□ 1.06
DDX54-207ENST00000550016 C9orf50Q5SZB4 431 aa21.65■■□□□ 1.06
DDX54-207ENST00000550016 FOXD4L5Q5VV16 416 aaPredicted RBP21.65■■□□□ 1.06
DDX54-207ENST00000550016 IER5Q5VY09 327 aa21.65■■□□□ 1.06
DDX54-207ENST00000550016 PLA2G4FQ68DD2 849 aa21.65■■□□□ 1.06
DDX54-207ENST00000550016 FOXD4L4Q8WXT5 416 aaPredicted RBP21.65■■□□□ 1.06
DDX54-207ENST00000550016 CEP170P1Q96L14 293 aa21.65■■□□□ 1.06
DDX54-207ENST00000550016 SH2D3AQ9BRG2 576 aa21.65■■□□□ 1.06
DDX54-207ENST00000550016 FTOQ9C0B1 505 aaKnown RBP eCLIP21.65■■□□□ 1.06
DDX54-207ENST00000550016 ANKEF1Q9NU02 776 aa21.65■■□□□ 1.06
DDX54-207ENST00000550016 PPME1Q9Y570 386 aa21.65■■□□□ 1.06
DDX54-207ENST00000550016 CLIC4Q9Y696 253 aa21.65■■□□□ 1.06
DDX54-207ENST00000550016 ZBTB39O15060 712 aa21.64■■□□□ 1.05
DDX54-207ENST00000550016 CXCL10P02778 98 aa21.64■■□□□ 1.05
DDX54-207ENST00000550016 MUTP22033 750 aa21.64■■□□□ 1.05
DDX54-207ENST00000550016 TMOD1P28289 359 aa21.64■■□□□ 1.05
DDX54-207ENST00000550016 CCT6AP40227 531 aaKnown RBP21.64■■□□□ 1.05
DDX54-207ENST00000550016 NPEPPSP55786 919 aa21.64■■□□□ 1.05
DDX54-207ENST00000550016 MGAT3Q09327 533 aa21.64■■□□□ 1.05
DDX54-207ENST00000550016 HAUS3Q68CZ6 603 aa21.64■■□□□ 1.05
DDX54-207ENST00000550016 EXOC8Q8IYI6 725 aa21.64■■□□□ 1.05
DDX54-207ENST00000550016 LINC01465Q8N7H1 131 aa21.64■■□□□ 1.05
DDX54-207ENST00000550016 CDY2AQ9Y6F7 541 aa21.64■■□□□ 1.05
DDX54-207ENST00000550016 TCHHQ07283 1943 aa21.63■■□□□ 1.05
DDX54-207ENST00000550016 VWA3AA6NCI4 1184 aa21.63■■□□□ 1.05
DDX54-207ENST00000550016 M0QZ92 97 aa21.63■■□□□ 1.05
DDX54-207ENST00000550016 F13A1P00488 732 aa21.63■■□□□ 1.05
DDX54-207ENST00000550016 PKP1Q13835 747 aa21.63■■□□□ 1.05
DDX54-207ENST00000550016 PTPAQ15257 358 aa21.63■■□□□ 1.05
DDX54-207ENST00000550016 XKR9Q5GH70 373 aa21.63■■□□□ 1.05
DDX54-207ENST00000550016 ZNF579Q8NAF0 562 aaKnown RBP21.63■■□□□ 1.05
DDX54-207ENST00000550016 ZNF396Q96N95 335 aaPredicted RBP21.63■■□□□ 1.05
DDX54-207ENST00000550016 NACC1Q96RE7 527 aa21.63■■□□□ 1.05
DDX54-207ENST00000550016 JPH2Q9BR39 696 aaPredicted RBP21.63■■□□□ 1.05
DDX54-207ENST00000550016 SUGCTQ9HAC7 445 aa21.63■■□□□ 1.05
DDX54-207ENST00000550016 MICAL3Q7RTP6 2002 aa21.62■■□□□ 1.05
DDX54-207ENST00000550016 IGKV6-21A0A0C4DH24 114 aa21.62■■□□□ 1.05
DDX54-207ENST00000550016 MAFO75444 373 aaPredicted RBP21.62■■□□□ 1.05
DDX54-207ENST00000550016 ACTN1P12814 892 aa21.62■■□□□ 1.05
DDX54-207ENST00000550016 CLCN3P51790 818 aa21.62■■□□□ 1.05
DDX54-207ENST00000550016 TMEM62Q0P6H9 643 aa21.62■■□□□ 1.05
DDX54-207ENST00000550016 KRT79Q5XKE5 535 aa21.62■■□□□ 1.05
DDX54-207ENST00000550016 LRRC71Q8N4P6 559 aa21.62■■□□□ 1.05
DDX54-207ENST00000550016 SNX29Q8TEQ0 813 aa21.62■■□□□ 1.05
DDX54-207ENST00000550016 PIGOQ8TEQ8 1089 aa21.62■■□□□ 1.05
DDX54-207ENST00000550016 HERVK_113Q902F9 699 aa21.62■■□□□ 1.05
DDX54-207ENST00000550016 RNPC3Q96LT9 517 aaKnown RBP21.62■■□□□ 1.05
DDX54-207ENST00000550016 USP28Q96RU2 1077 aa21.62■■□□□ 1.05
DDX54-207ENST00000550016 MAP7D2Q96T17 732 aa21.62■■□□□ 1.05
DDX54-207ENST00000550016 CELF4Q9BZC1 486 aaKnown RBP21.62■■□□□ 1.05
DDX54-207ENST00000550016 TRPV2Q9Y5S1 764 aa21.62■■□□□ 1.05
DDX54-207ENST00000550016 KDM3AQ9Y4C1 1321 aa21.61■■□□□ 1.05
DDX54-207ENST00000550016 PP2D1A8MPX8 630 aa21.61■■□□□ 1.05
DDX54-207ENST00000550016 CDC25AP30304 524 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms