RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 IFIH1Q9BYX4 1025 aaKnown RBP11.04□□□□□ -0.64
HDAC7-229ENST00000549883 SLC28A3Q9HAS3 691 aa11.04□□□□□ -0.64
HDAC7-229ENST00000549883 WRAP73Q9P2S5 460 aaPredicted RBP11.04□□□□□ -0.64
HDAC7-229ENST00000549883 ARID2Q68CP9 1835 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 PRRC2BQ5JSZ5 2229 aaKnown RBP11.03□□□□□ -0.64
HDAC7-229ENST00000549883 SMIM35A0A1B0GVV1 85 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 KIF28PB7ZC32 967 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 TLL1O43897 1013 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 GJB5O95377 273 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 VTNP04004 478 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 OATP04181 439 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 FOSL2P15408 326 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 ATP2B1P20020 1258 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 CD52P31358 61 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 CLCN3P51790 818 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 JAK3P52333 1124 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 SPIRE1Q08AE8 756 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 DRP2Q13474 957 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 RABEP1Q15276 862 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 ZNF484Q5JVG2 852 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 PPP4R3AQ6IN85 833 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 MYOCDQ8IZQ8 938 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 ZNF579Q8NAF0 562 aaKnown RBP11.03□□□□□ -0.64
HDAC7-229ENST00000549883 BBXQ8WY36 941 aaPredicted RBP11.03□□□□□ -0.64
HDAC7-229ENST00000549883 ZSCAN31Q96LW9 406 aaPredicted RBP11.03□□□□□ -0.64
HDAC7-229ENST00000549883 CEP89Q96ST8 783 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 LLPHQ9BRT6 129 aaKnown RBP11.03□□□□□ -0.64
HDAC7-229ENST00000549883 CELF4Q9BZC1 486 aaKnown RBP11.03□□□□□ -0.64
HDAC7-229ENST00000549883 TMEM60Q9H2L4 133 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 TCEAL9Q9UHQ7 104 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 GINS2Q9Y248 185 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 TRPV2Q9Y5S1 764 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 COL4A6Q14031 1691 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 NLRC5Q86WI3 1866 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 COL1A2P08123 1366 aa11.03□□□□□ -0.64
HDAC7-229ENST00000549883 PRUNE2Q8WUY3 3088 aa11.02□□□□□ -0.65
HDAC7-229ENST00000549883 ZBTB39O15060 712 aa11.02□□□□□ -0.65
HDAC7-229ENST00000549883 UPP2O95045 317 aa11.02□□□□□ -0.65
HDAC7-229ENST00000549883 SFNP31947 248 aa11.02□□□□□ -0.65
HDAC7-229ENST00000549883 PPP2R5CQ13362 524 aa11.02□□□□□ -0.65
HDAC7-229ENST00000549883 TARBP2Q15633 366 aaKnown RBP11.02□□□□□ -0.65
HDAC7-229ENST00000549883 PLA2G4FQ68DD2 849 aa11.02□□□□□ -0.65
HDAC7-229ENST00000549883 RSPH3Q86UC2 560 aa11.02□□□□□ -0.65
HDAC7-229ENST00000549883 METTL13Q8N6R0 699 aa11.02□□□□□ -0.65
HDAC7-229ENST00000549883 LINC01465Q8N7H1 131 aa11.02□□□□□ -0.65
HDAC7-229ENST00000549883 MAFAQ8NHW3 353 aaPredicted RBP11.02□□□□□ -0.65
HDAC7-229ENST00000549883 TMX3Q96JJ7 454 aa11.02□□□□□ -0.65
HDAC7-229ENST00000549883 C8orf76Q96K31 380 aa11.02□□□□□ -0.65
HDAC7-229ENST00000549883 ZBED2Q9BTP6 218 aa11.02□□□□□ -0.65
HDAC7-229ENST00000549883 TMX1Q9H3N1 280 aa11.02□□□□□ -0.65
HDAC7-229ENST00000549883 PRDM6Q9NQX0 595 aa11.02□□□□□ -0.65
HDAC7-229ENST00000549883 SH2B1Q9NRF2 756 aaPredicted RBP11.02□□□□□ -0.65
HDAC7-229ENST00000549883 RGL1Q9NZL6 768 aa11.02□□□□□ -0.65
HDAC7-229ENST00000549883 MTUS1Q9ULD2 1270 aa11.02□□□□□ -0.65
HDAC7-229ENST00000549883 NOC2LQ9Y3T9 749 aaKnown RBP11.02□□□□□ -0.65
HDAC7-229ENST00000549883 KIAA1671Q9BY89 1806 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 A0A087WWV3 80 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 LINC01553A4QN01 128 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 ENPP3O14638 875 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 MGEA5O60502 916 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 GPR32O75388 356 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 AMHP03971 560 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 GCFC2P16383 781 aaKnown RBP11.01□□□□□ -0.65
HDAC7-229ENST00000549883 TRIM29Q14134 588 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 NBR1Q14596 966 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 CCDC85BQ15834 202 aaPredicted RBP11.01□□□□□ -0.65
HDAC7-229ENST00000549883 KIZQ2M2Z5 673 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 MTERF2Q49AM1 385 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 IER5Q5VY09 327 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 NCAPH2Q6IBW4 605 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 EFCAB12Q6NXP0 572 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 TSHZ1Q6ZSZ6 1077 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 ANO5Q75V66 913 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 FBXO18Q8NFZ0 1043 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 ARNTL2Q8WYA1 636 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 FAM20AQ96MK3 541 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 BRMS1Q9HCU9 246 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 SEPT9Q9UHD8 586 aaPredicted RBP11.01□□□□□ -0.65
HDAC7-229ENST00000549883 PADI3Q9ULW8 664 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 GTF3C3Q9Y5Q9 886 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 ATG2AQ2TAZ0 1938 aa11.01□□□□□ -0.65
HDAC7-229ENST00000549883 MYO7AQ13402 2215 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 DDX11L8A8MPP1 907 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 EFCAB14O75071 495 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 IGFBP4P22692 258 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 MCM7P33993 719 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 GATMP50440 423 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 NPEPPSP55786 919 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 HTRA4P83105 476 aaPredicted RBP11□□□□□ -0.65
HDAC7-229ENST00000549883 CYP4A11Q02928 519 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 CTTNQ14247 550 aaKnown RBP11□□□□□ -0.65
HDAC7-229ENST00000549883 RDM1Q8NG50 284 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 PPM1EQ8WY54 764 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 TNPO1Q92973 898 aaKnown RBP11□□□□□ -0.65
HDAC7-229ENST00000549883 TOP1MTQ969P6 601 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 DYDC2Q96IM9 177 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 FAM167AQ96KS9 214 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 RAD9AQ99638 391 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 OSMRQ99650 979 aa11□□□□□ -0.65
HDAC7-229ENST00000549883 C17orf80Q9BSJ5 609 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms