RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 MICU3Q86XE3 530 aa7.65□□□□□ -1.18
TMEM116-208ENST00000549537 RAB11FIP4Q86YS3 637 aa7.65□□□□□ -1.18
TMEM116-208ENST00000549537 CNTNAP5Q8WYK1 1306 aa7.65□□□□□ -1.18
TMEM116-208ENST00000549537 GBF1Q92538 1859 aa7.65□□□□□ -1.18
TMEM116-208ENST00000549537 DHX38Q92620 1227 aaKnown RBP7.65□□□□□ -1.18
TMEM116-208ENST00000549537 SCLYQ96I15 445 aa7.65□□□□□ -1.18
TMEM116-208ENST00000549537 TCEANC2Q96MN5 208 aa7.65□□□□□ -1.18
TMEM116-208ENST00000549537 KCTD15Q96SI1 283 aaPredicted RBP7.65□□□□□ -1.18
TMEM116-208ENST00000549537 ARHGAP9Q9BRR9 750 aa7.65□□□□□ -1.18
TMEM116-208ENST00000549537 SEMA6BQ9H3T3 888 aa7.65□□□□□ -1.18
TMEM116-208ENST00000549537 DOCK5Q9H7D0 1870 aa7.65□□□□□ -1.18
TMEM116-208ENST00000549537 CXXC1Q9P0U4 656 aaPredicted RBP7.65□□□□□ -1.18
TMEM116-208ENST00000549537 FKBPLQ9UIM3 349 aa7.65□□□□□ -1.18
TMEM116-208ENST00000549537 USTQ9Y2C2 406 aa7.65□□□□□ -1.18
TMEM116-208ENST00000549537 NID2Q14112 1375 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 TMEM265A0A087WTH1 108 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.64□□□□□ -1.19
TMEM116-208ENST00000549537 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.64□□□□□ -1.19
TMEM116-208ENST00000549537 hCG_1642624A0A1W2PR95 340 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 GRXCR1A8MXD5 290 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 SPATA31C2B4DYI2 1134 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 STAM2O75886 525 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 GGPS1O95749 300 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 ZNF286BP0CG31 522 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 CPA1P15085 419 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 CASTP20810 708 aaKnown RBP7.64□□□□□ -1.19
TMEM116-208ENST00000549537 HOXC8P31273 242 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 SOX11P35716 441 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 RCAN1P53805 252 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 RBL2Q08999 1139 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 CBLBQ13191 982 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 KRT32Q14532 448 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 GPNMBQ14956 572 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 FAM47CQ5HY64 1035 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 PCNX4Q63HM2 1172 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 ZBTB33Q86T24 672 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 FAM161BQ96MY7 647 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 CDX2Q99626 313 aaPredicted RBP7.64□□□□□ -1.19
TMEM116-208ENST00000549537 C16orf70Q9BSU1 422 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 AGXT2Q9BYV1 514 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 SEC63Q9UGP8 760 aaKnown RBP7.64□□□□□ -1.19
TMEM116-208ENST00000549537 GTF2IRD1Q9UHL9 959 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 TELO2Q9Y4R8 837 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 SNX14Q9Y5W7 946 aa7.64□□□□□ -1.19
TMEM116-208ENST00000549537 PTPRSQ13332 1948 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 KLF18A0A0U1RQI7 1052 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 ZBTB43O43298 467 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 SORBS3O60504 671 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 PPFIA4O75335 1185 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 FGBP02675 491 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 PFKMP08237 780 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 IQCF3P0C7M6 154 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 CDC27P30260 824 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 PTGISQ16647 500 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 UBE2SQ16763 222 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 RTN1Q16799 776 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 KIAA0753Q2KHM9 967 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 TRIM71Q2Q1W2 868 aaKnown RBP7.63□□□□□ -1.19
TMEM116-208ENST00000549537 WWC2Q6AWC2 1192 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 XRRA1Q6P2D8 792 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 METTL7BQ6UX53 244 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 FBXL16Q8N461 479 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 SMARCC2Q8TAQ2 1214 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 WNT8BQ93098 351 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 PBXIP1Q96AQ6 731 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 SPATA33Q96N06 139 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 KATNAL1Q9BW62 490 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 PBX4Q9BYU1 374 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 PSTPIP2Q9H939 334 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 RBM28Q9NW13 759 aaKnown RBP7.63□□□□□ -1.19
TMEM116-208ENST00000549537 HDAC6Q9UBN7 1215 aa7.63□□□□□ -1.19
TMEM116-208ENST00000549537 TRIP12Q14669 1992 aaPredicted RBP7.62□□□□□ -1.19
TMEM116-208ENST00000549537 RBAK-RBAKDNI3L0D1 243 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 STXBP3O00186 592 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 FIBPO43427 364 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 EPB41L2O43491 1005 aaKnown RBP7.62□□□□□ -1.19
TMEM116-208ENST00000549537 ATP9AO75110 1047 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 LGALS2P05162 132 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 KCNA2P16389 499 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 ITGB5P18084 799 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 RFC2P35250 354 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 EVCP57679 992 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 ZNF200P98182 395 aaPredicted RBP7.62□□□□□ -1.19
TMEM116-208ENST00000549537 SRSF11Q05519 484 aaKnown RBP7.62□□□□□ -1.19
TMEM116-208ENST00000549537 BFSP2Q13515 415 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 GNPTABQ3T906 1256 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 SYNE3Q6ZMZ3 975 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 OTOP2Q7RTS6 562 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 HEATR3Q7Z4Q2 680 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 TEX2Q8IWB9 1127 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 RPUSD2Q8IZ73 545 aaKnown RBP7.62□□□□□ -1.19
TMEM116-208ENST00000549537 TET1Q8NFU7 2136 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 CAGE1Q8TC20 777 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 ADAMTS19Q8TE59 1207 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 AFAP1L1Q8TED9 768 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 CUL5Q93034 780 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 TIFAQ96CG3 184 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 GPRASP2Q96D09 838 aa7.62□□□□□ -1.19
TMEM116-208ENST00000549537 JAKMIP1Q96N16 626 aaKnown RBP7.62□□□□□ -1.19
TMEM116-208ENST00000549537 GPR20Q99678 358 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms