RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 NECTIN4Q96NY8 510 aa13.99□□□□□ -0.17
DDX54-206ENST00000549271 SENP7Q9BQF6 1050 aa13.99□□□□□ -0.17
DDX54-206ENST00000549271 SPZ1Q9BXG8 430 aa13.99□□□□□ -0.17
DDX54-206ENST00000549271 SEMA4AQ9H3S1 761 aa13.99□□□□□ -0.17
DDX54-206ENST00000549271 DLL3Q9NYJ7 618 aa13.99□□□□□ -0.17
DDX54-206ENST00000549271 TUBE1Q9UJT0 475 aa13.99□□□□□ -0.17
DDX54-206ENST00000549271 DENND4AQ7Z401 1863 aa13.98□□□□□ -0.17
DDX54-206ENST00000549271 CHD6Q8TD26 2715 aa13.98□□□□□ -0.17
DDX54-206ENST00000549271 FIBPO43427 364 aa13.98□□□□□ -0.17
DDX54-206ENST00000549271 PI15O43692 258 aa13.98□□□□□ -0.17
DDX54-206ENST00000549271 LMNAP02545 664 aaKnown RBP13.98□□□□□ -0.17
DDX54-206ENST00000549271 ASGR2P07307 311 aa13.98□□□□□ -0.17
DDX54-206ENST00000549271 NPR3P17342 541 aa13.98□□□□□ -0.17
DDX54-206ENST00000549271 PPFIA1Q13136 1202 aa13.98□□□□□ -0.17
DDX54-206ENST00000549271 CREB3L3Q68CJ9 461 aa13.98□□□□□ -0.17
DDX54-206ENST00000549271 KIAA2013Q8IYS2 634 aa13.98□□□□□ -0.17
DDX54-206ENST00000549271 ZDHHC14Q8IZN3 488 aa13.98□□□□□ -0.17
DDX54-206ENST00000549271 AAASQ9NRG9 546 aa13.98□□□□□ -0.17
DDX54-206ENST00000549271 TMEM260Q9NX78 707 aa13.98□□□□□ -0.17
DDX54-206ENST00000549271 PADI3Q9ULW8 664 aa13.98□□□□□ -0.17
DDX54-206ENST00000549271 LZTS1Q9Y250 596 aa13.98□□□□□ -0.17
DDX54-206ENST00000549271 CACNA1GO43497 2377 aa13.98□□□□□ -0.17
DDX54-206ENST00000549271 DDAH1O94760 285 aa13.97□□□□□ -0.17
DDX54-206ENST00000549271 RPLP2P05387 115 aaKnown RBP13.97□□□□□ -0.17
DDX54-206ENST00000549271 KIF5BP33176 963 aa13.97□□□□□ -0.17
DDX54-206ENST00000549271 SARSP49591 514 aaKnown RBP13.97□□□□□ -0.17
DDX54-206ENST00000549271 ITIH3Q06033 890 aa13.97□□□□□ -0.17
DDX54-206ENST00000549271 GRIK4Q16099 956 aa13.97□□□□□ -0.17
DDX54-206ENST00000549271 PLPP4Q5VZY2 271 aa13.97□□□□□ -0.17
DDX54-206ENST00000549271 PCNX4Q63HM2 1172 aa13.97□□□□□ -0.17
DDX54-206ENST00000549271 LLGL2Q6P1M3 1020 aa13.97□□□□□ -0.17
DDX54-206ENST00000549271 COLGALT1Q8NBJ5 622 aa13.97□□□□□ -0.17
DDX54-206ENST00000549271 FLCNQ8NFG4 579 aa13.97□□□□□ -0.17
DDX54-206ENST00000549271 LZTS2Q9BRK4 669 aa13.97□□□□□ -0.17
DDX54-206ENST00000549271 ADAM7Q9H2U9 754 aa13.97□□□□□ -0.17
DDX54-206ENST00000549271 TMX1Q9H3N1 280 aa13.97□□□□□ -0.17
DDX54-206ENST00000549271 LY9Q9HBG7 655 aa13.97□□□□□ -0.17
DDX54-206ENST00000549271 ANO2Q9NQ90 1003 aa13.97□□□□□ -0.17
DDX54-206ENST00000549271 IGSF9BQ9UPX0 1349 aa13.96□□□□□ -0.17
DDX54-206ENST00000549271 HIDE1A8MVS5 230 aa13.96□□□□□ -0.17
DDX54-206ENST00000549271 MEIS2O14770 477 aa13.96□□□□□ -0.17
DDX54-206ENST00000549271 CDC45O75419 566 aa13.96□□□□□ -0.17
DDX54-206ENST00000549271 TCF7P36402 384 aaPredicted RBP13.96□□□□□ -0.17
DDX54-206ENST00000549271 PLCB3Q01970 1234 aa13.96□□□□□ -0.17
DDX54-206ENST00000549271 APOBRQ0VD83 1088 aa13.96□□□□□ -0.17
DDX54-206ENST00000549271 TPRNQ4KMQ1 711 aa13.96□□□□□ -0.17
DDX54-206ENST00000549271 SPOUT1Q5T280 376 aaKnown RBP13.96□□□□□ -0.17
DDX54-206ENST00000549271 IER5Q5VY09 327 aa13.96□□□□□ -0.17
DDX54-206ENST00000549271 CES5AQ6NT32 575 aa13.96□□□□□ -0.17
DDX54-206ENST00000549271 THNSL1Q8IYQ7 743 aa13.96□□□□□ -0.17
DDX54-206ENST00000549271 ZNF654Q8IZM8 581 aa13.96□□□□□ -0.17
DDX54-206ENST00000549271 TMTC2Q8N394 836 aa13.96□□□□□ -0.17
DDX54-206ENST00000549271 DTWD2Q8NBA8 298 aa13.96□□□□□ -0.17
DDX54-206ENST00000549271 GIMAP8Q8ND71 665 aaPredicted RBP13.96□□□□□ -0.17
DDX54-206ENST00000549271 CTCFLQ8NI51 663 aaPredicted RBP13.96□□□□□ -0.17
DDX54-206ENST00000549271 CASP10Q92851 521 aa13.96□□□□□ -0.17
DDX54-206ENST00000549271 RRP36Q96EU6 259 aaKnown RBP13.96□□□□□ -0.17
DDX54-206ENST00000549271 HCSTQ9UBK5 93 aa13.96□□□□□ -0.17
DDX54-206ENST00000549271 LIMD1Q9UGP4 676 aa13.96□□□□□ -0.17
DDX54-206ENST00000549271 LRFN2Q9ULH4 789 aa13.96□□□□□ -0.17
DDX54-206ENST00000549271 SPTBN2O15020 2390 aa13.96□□□□□ -0.18
DDX54-206ENST00000549271 MAP1BP46821 2468 aaKnown RBP13.96□□□□□ -0.18
DDX54-206ENST00000549271 PRC1O43663 620 aa13.95□□□□□ -0.18
DDX54-206ENST00000549271 MTHFRP42898 656 aa13.95□□□□□ -0.18
DDX54-206ENST00000549271 GNAQP50148 359 aa13.95□□□□□ -0.18
DDX54-206ENST00000549271 PAK2Q13177 524 aa13.95□□□□□ -0.18
DDX54-206ENST00000549271 NLRX1Q86UT6 975 aa13.95□□□□□ -0.18
DDX54-206ENST00000549271 SMARCC2Q8TAQ2 1214 aa13.95□□□□□ -0.18
DDX54-206ENST00000549271 KCNG4Q8TDN1 519 aa13.95□□□□□ -0.18
DDX54-206ENST00000549271 MRPS27Q92552 414 aaKnown RBP13.95□□□□□ -0.18
DDX54-206ENST00000549271 CUL5Q93034 780 aa13.95□□□□□ -0.18
DDX54-206ENST00000549271 ZBTB10Q96DT7 871 aa13.95□□□□□ -0.18
DDX54-206ENST00000549271 TCF25Q9BQ70 676 aa13.95□□□□□ -0.18
DDX54-206ENST00000549271 RTP3Q9BQQ7 232 aa13.95□□□□□ -0.18
DDX54-206ENST00000549271 CWH43Q9H720 699 aa13.95□□□□□ -0.18
DDX54-206ENST00000549271 NGRNQ9NPE2 291 aaKnown RBP13.95□□□□□ -0.18
DDX54-206ENST00000549271 TYW1Q9NV66 732 aaKnown RBP13.95□□□□□ -0.18
DDX54-206ENST00000549271 PCDHB7Q9Y5E2 793 aa13.95□□□□□ -0.18
DDX54-206ENST00000549271 TRPV2Q9Y5S1 764 aa13.95□□□□□ -0.18
DDX54-206ENST00000549271 HCFC2Q9Y5Z7 792 aa13.95□□□□□ -0.18
DDX54-206ENST00000549271 TBKBP1A7MCY6 615 aa13.94□□□□□ -0.18
DDX54-206ENST00000549271 NEFLP07196 543 aa13.94□□□□□ -0.18
DDX54-206ENST00000549271 MCM5P33992 734 aa13.94□□□□□ -0.18
DDX54-206ENST00000549271 LIFRP42702 1097 aa13.94□□□□□ -0.18
DDX54-206ENST00000549271 SP4Q02446 784 aa13.94□□□□□ -0.18
DDX54-206ENST00000549271 FAM102BQ5T8I3 360 aa13.94□□□□□ -0.18
DDX54-206ENST00000549271 USP17L6PQ6QN14 398 aa13.94□□□□□ -0.18
DDX54-206ENST00000549271 FAM43BQ6ZT52 329 aaPredicted RBP13.94□□□□□ -0.18
DDX54-206ENST00000549271 RASEFQ8IZ41 740 aa13.94□□□□□ -0.18
DDX54-206ENST00000549271 PLCD3Q8N3E9 789 aa13.94□□□□□ -0.18
DDX54-206ENST00000549271 TDRD5Q8NAT2 981 aaKnown RBP13.94□□□□□ -0.18
DDX54-206ENST00000549271 GPRASP2Q96D09 838 aa13.94□□□□□ -0.18
DDX54-206ENST00000549271 CDHR1Q96JP9 859 aa13.94□□□□□ -0.18
DDX54-206ENST00000549271 TMEM87BQ96K49 555 aa13.94□□□□□ -0.18
DDX54-206ENST00000549271 FAM49AQ9H0Q0 323 aaPredicted RBP13.94□□□□□ -0.18
DDX54-206ENST00000549271 ENTPD7Q9NQZ7 604 aa13.94□□□□□ -0.18
DDX54-206ENST00000549271 ERAP1Q9NZ08 941 aa13.94□□□□□ -0.18
DDX54-206ENST00000549271 RTEL1Q9NZ71 1219 aa13.94□□□□□ -0.18
DDX54-206ENST00000549271 SEC63Q9UGP8 760 aaKnown RBP13.94□□□□□ -0.18
DDX54-206ENST00000549271 USTQ9Y2C2 406 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms