RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 EDRF1Q3B7T1 1238 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 C15orf52Q6ZUT6 534 aaKnown RBP13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 MAEAQ7L5Y9 396 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 MYCT1Q8N699 235 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 DBNDD1Q9H9R9 158 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 GOPCQ9HD26 462 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 FBXL5Q9UKA1 691 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 MEIS2O14770 477 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 GYS1P13807 737 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 POLD1P28340 1107 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 IFT88Q13099 833 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 SLFN12Q8IYM2 578 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 TPCN2Q8NHX9 752 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 SMIM23A6NLE4 172 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 PPP1R37O75864 691 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 SPATA31C1P0DKV0 1188 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 ZNF211Q13398 564 aaPredicted RBP13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 COG2Q14746 738 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 IFI16Q16666 785 aaKnown RBP13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 CERKLQ49MI3 558 aaPredicted RBP13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 HYIQ5T013 277 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 ICE2Q659A1 982 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 KDM7AQ6ZMT4 941 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 TRIM51Q9BSJ1 452 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 EFCC1Q9HA90 598 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 SWAP70Q9UH65 585 aa13.01□□□□□ -0.33
RAPGEF3-219ENST00000549151 UBAP1LF5GYI3 381 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 MYO1FO00160 1098 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 PPEF1O14829 653 aaPredicted RBP13□□□□□ -0.33
RAPGEF3-219ENST00000549151 LRRN2O75325 713 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 FAM13AO94988 1023 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 FGGP02679 453 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 TRIM49P0CI25 452 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 TRIM49CP0CI26 452 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 IBSPP21815 317 aaPredicted RBP13□□□□□ -0.33
RAPGEF3-219ENST00000549151 TEKT1Q969V4 418 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 ISCUQ9H1K1 167 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 DNAJC18Q9H819 358 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 CHORDC1Q9UHD1 332 aaPredicted RBP13□□□□□ -0.33
RAPGEF3-219ENST00000549151 RABGAP1Q9Y3P9 1069 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 DDTLA6NHG4 134 aaPredicted RBP13□□□□□ -0.33
RAPGEF3-219ENST00000549151 EML1O00423 815 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 DDX3XO00571 662 aaKnown RBP eCLIP13□□□□□ -0.33
RAPGEF3-219ENST00000549151 RGL2O15211 777 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 MDH1P40925 334 aaKnown RBP13□□□□□ -0.33
RAPGEF3-219ENST00000549151 MNAT1P51948 309 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 GALCP54803 685 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 MARSP56192 900 aaKnown RBP13□□□□□ -0.33
RAPGEF3-219ENST00000549151 ICA1Q05084 483 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 PPP4R3CPQ6ZMV5 832 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 FRMD5Q7Z6J6 570 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 ZNF473Q8WTR7 871 aaKnown RBP13□□□□□ -0.33
RAPGEF3-219ENST00000549151 SLC35C1Q96A29 364 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 CCT8L2Q96SF2 557 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 TMEM110-MUSTN1A8MSY1 372 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 EVI5O60447 810 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 RPL13P26373 211 aaKnown RBP13□□□□□ -0.33
RAPGEF3-219ENST00000549151 LLGL1Q15334 1064 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 EPHA7Q15375 998 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 PTGISQ16647 500 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 B4GALNT4Q76KP1 1039 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 NLRP14Q86W24 1093 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 FBXO11Q86XK2 927 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 SYT2Q8N9I0 419 aaPredicted RBP13□□□□□ -0.33
RAPGEF3-219ENST00000549151 BUD13Q9BRD0 619 aaKnown RBP eCLIP13□□□□□ -0.33
RAPGEF3-219ENST00000549151 EPN3Q9H201 632 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 NOVA2Q9UNW9 492 aaKnown RBP13□□□□□ -0.33
RAPGEF3-219ENST00000549151 NR2E1Q9Y466 385 aa13□□□□□ -0.33
RAPGEF3-219ENST00000549151 ASTN1O14525 1302 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 F5H6K3 240 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 MSH4O15457 936 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 CFBP00751 764 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 RPA1P27694 616 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 STAT1P42224 750 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 KLRC3Q07444 240 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 DHX9Q08211 1270 aaKnown RBP12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 IFFO1Q0D2I5 559 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 UAP1Q16222 522 aaPredicted RBP12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 KRT71Q3SY84 523 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 CRY2Q49AN0 593 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 FAM186BQ8IYM0 893 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 LRRC57Q8N9N7 239 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 UHMK1Q8TAS1 419 aaKnown RBP12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 ETNPPLQ8TBG4 499 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 PBKQ96KB5 322 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 AMNQ9BXJ7 453 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 PKD2L1Q9P0L9 805 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 ATP8A1Q9Y2Q0 1164 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 NRAPQ86VF7 1730 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 PLIN4Q96Q06 1357 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 PITPNM2Q9BZ72 1349 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 DDR1Q08345 913 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 SPIRE1Q08AE8 756 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 TBC1D10BQ4KMP7 808 aaPredicted RBP12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 NAP1L4Q99733 375 aaKnown RBP12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 EIF2AK1Q9BQI3 630 aaKnown RBP12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 TYW1Q9NV66 732 aaKnown RBP12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 USP21Q9UK80 565 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 TRAF3IP3Q9Y228 551 aa12.99□□□□□ -0.33
RAPGEF3-219ENST00000549151 BZW2Q9Y6E2 419 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms