RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 PAK2Q13177 524 aa12.86□□□□□ -0.35
BEST3-209ENST00000548658 GRB10Q13322 594 aa12.86□□□□□ -0.35
BEST3-209ENST00000548658 SKIV2LQ15477 1246 aaKnown RBP12.86□□□□□ -0.35
BEST3-209ENST00000548658 MICALL1Q8N3F8 863 aa12.86□□□□□ -0.35
BEST3-209ENST00000548658 IL27Q8NEV9 243 aa12.86□□□□□ -0.35
BEST3-209ENST00000548658 TRAPPC12Q8WVT3 735 aa12.86□□□□□ -0.35
BEST3-209ENST00000548658 PHF20Q9BVI0 1012 aa12.86□□□□□ -0.35
BEST3-209ENST00000548658 OSBPL7Q9BZF2 842 aa12.86□□□□□ -0.35
BEST3-209ENST00000548658 COG5Q9UP83 839 aa12.86□□□□□ -0.35
BEST3-209ENST00000548658 RWDD3Q9Y3V2 267 aa12.86□□□□□ -0.35
BEST3-209ENST00000548658 PTPRSQ13332 1948 aa12.86□□□□□ -0.35
BEST3-209ENST00000548658 MYH9P35579 1960 aaKnown RBP12.85□□□□□ -0.35
BEST3-209ENST00000548658 EPOPA6NHQ4 379 aa12.85□□□□□ -0.35
BEST3-209ENST00000548658 LPXNO60711 386 aa12.85□□□□□ -0.35
BEST3-209ENST00000548658 GCFC2P16383 781 aaKnown RBP12.85□□□□□ -0.35
BEST3-209ENST00000548658 ATP4AP20648 1035 aa12.85□□□□□ -0.35
BEST3-209ENST00000548658 NEK4P51957 841 aa12.85□□□□□ -0.35
BEST3-209ENST00000548658 TMEM62Q0P6H9 643 aa12.85□□□□□ -0.35
BEST3-209ENST00000548658 PTPROQ16827 1216 aa12.85□□□□□ -0.35
BEST3-209ENST00000548658 KIAA0319LQ8IZA0 1049 aa12.85□□□□□ -0.35
BEST3-209ENST00000548658 METTL13Q8N6R0 699 aa12.85□□□□□ -0.35
BEST3-209ENST00000548658 FBXO22Q8NEZ5 403 aa12.85□□□□□ -0.35
BEST3-209ENST00000548658 AIFM3Q96NN9 605 aa12.85□□□□□ -0.35
BEST3-209ENST00000548658 ASB2Q96Q27 587 aa12.85□□□□□ -0.35
BEST3-209ENST00000548658 UIMC1Q96RL1 719 aa12.85□□□□□ -0.35
BEST3-209ENST00000548658 AGO3Q9H9G7 860 aaKnown RBP12.85□□□□□ -0.35
BEST3-209ENST00000548658 BRMS1Q9HCU9 246 aa12.85□□□□□ -0.35
BEST3-209ENST00000548658 ORC3Q9UBD5 711 aaPredicted RBP12.85□□□□□ -0.35
BEST3-209ENST00000548658 MTUS1Q9ULD2 1270 aa12.85□□□□□ -0.35
BEST3-209ENST00000548658 PADI3Q9ULW8 664 aa12.85□□□□□ -0.35
BEST3-209ENST00000548658 ZBTB42B2RXF5 422 aa12.84□□□□□ -0.35
BEST3-209ENST00000548658 GPR182O15218 404 aa12.84□□□□□ -0.35
BEST3-209ENST00000548658 EDIL3O43854 480 aa12.84□□□□□ -0.35
BEST3-209ENST00000548658 RPS6KA5O75582 802 aa12.84□□□□□ -0.35
BEST3-209ENST00000548658 PSMD10O75832 226 aa12.84□□□□□ -0.35
BEST3-209ENST00000548658 STAG3L1P0CL83 205 aa12.84□□□□□ -0.35
BEST3-209ENST00000548658 CD52P31358 61 aa12.84□□□□□ -0.35
BEST3-209ENST00000548658 CDC42EP1Q00587 391 aa12.84□□□□□ -0.35
BEST3-209ENST00000548658 NPY5RQ15761 445 aa12.84□□□□□ -0.35
BEST3-209ENST00000548658 EPC2Q52LR7 807 aa12.84□□□□□ -0.35
BEST3-209ENST00000548658 PPP4R3AQ6IN85 833 aa12.84□□□□□ -0.35
BEST3-209ENST00000548658 MIER3Q7Z3K6 550 aa12.84□□□□□ -0.35
BEST3-209ENST00000548658 NEK8Q86SG6 692 aa12.84□□□□□ -0.35
BEST3-209ENST00000548658 FIBCD1Q8N539 461 aa12.84□□□□□ -0.35
BEST3-209ENST00000548658 ZBTB10Q96DT7 871 aa12.84□□□□□ -0.35
BEST3-209ENST00000548658 FAM20AQ96MK3 541 aa12.84□□□□□ -0.35
BEST3-209ENST00000548658 MBOAT7Q96N66 472 aa12.84□□□□□ -0.35
BEST3-209ENST00000548658 MAP7D2Q96T17 732 aa12.84□□□□□ -0.35
BEST3-209ENST00000548658 DDX25Q9UHL0 483 aaKnown RBP12.84□□□□□ -0.35
BEST3-209ENST00000548658 KCNJ14Q9UNX9 436 aa12.84□□□□□ -0.35
BEST3-209ENST00000548658 GINS2Q9Y248 185 aa12.84□□□□□ -0.35
BEST3-209ENST00000548658 PRRC2BQ5JSZ5 2229 aaKnown RBP12.84□□□□□ -0.35
BEST3-209ENST00000548658 TBX3O15119 743 aa12.83□□□□□ -0.36
BEST3-209ENST00000548658 CHMP2AO43633 222 aa12.83□□□□□ -0.36
BEST3-209ENST00000548658 DKC1O60832 514 aaKnown RBP eCLIP12.83□□□□□ -0.36
BEST3-209ENST00000548658 TDP2O95551 362 aa12.83□□□□□ -0.36
BEST3-209ENST00000548658 C22orf31O95567 290 aa12.83□□□□□ -0.36
BEST3-209ENST00000548658 OATP04181 439 aa12.83□□□□□ -0.36
BEST3-209ENST00000548658 RB1P06400 928 aa12.83□□□□□ -0.36
BEST3-209ENST00000548658 CRYBB1P53674 252 aaPredicted RBP12.83□□□□□ -0.36
BEST3-209ENST00000548658 NFX1Q12986 1120 aaKnown RBP12.83□□□□□ -0.36
BEST3-209ENST00000548658 ME3Q16798 604 aa12.83□□□□□ -0.36
BEST3-209ENST00000548658 INF2Q27J81 1249 aa12.83□□□□□ -0.36
BEST3-209ENST00000548658 LETM2Q2VYF4 491 aa12.83□□□□□ -0.36
BEST3-209ENST00000548658 TRMT1LQ7Z2T5 733 aaKnown RBP12.83□□□□□ -0.36
BEST3-209ENST00000548658 TMEM192Q8IY95 271 aa12.83□□□□□ -0.36
BEST3-209ENST00000548658 GTF3C6Q969F1 213 aa12.83□□□□□ -0.36
BEST3-209ENST00000548658 C17orf80Q9BSJ5 609 aa12.83□□□□□ -0.36
BEST3-209ENST00000548658 PRDM6Q9NQX0 595 aa12.83□□□□□ -0.36
BEST3-209ENST00000548658 C1orf112Q9NSG2 853 aa12.83□□□□□ -0.36
BEST3-209ENST00000548658 COL4A6Q14031 1691 aa12.83□□□□□ -0.36
BEST3-209ENST00000548658 H3BNC9 293 aa12.82□□□□□ -0.36
BEST3-209ENST00000548658 MARCH6O60337 910 aa12.82□□□□□ -0.36
BEST3-209ENST00000548658 DGKIO75912 1065 aa12.82□□□□□ -0.36
BEST3-209ENST00000548658 CTDNEP1O95476 244 aa12.82□□□□□ -0.36
BEST3-209ENST00000548658 PRKCEQ02156 737 aa12.82□□□□□ -0.36
BEST3-209ENST00000548658 TBC1D8BQ0IIM8 1120 aa12.82□□□□□ -0.36
BEST3-209ENST00000548658 TRIM29Q14134 588 aa12.82□□□□□ -0.36
BEST3-209ENST00000548658 BTG3Q14201 252 aaPredicted RBP12.82□□□□□ -0.36
BEST3-209ENST00000548658 XKR3Q5GH77 459 aa12.82□□□□□ -0.36
BEST3-209ENST00000548658 EFCAB12Q6NXP0 572 aa12.82□□□□□ -0.36
BEST3-209ENST00000548658 SPRED2Q7Z698 418 aa12.82□□□□□ -0.36
BEST3-209ENST00000548658 NPAS4Q8IUM7 802 aa12.82□□□□□ -0.36
BEST3-209ENST00000548658 ETNPPLQ8TBG4 499 aa12.82□□□□□ -0.36
BEST3-209ENST00000548658 GDPD5Q8WTR4 605 aa12.82□□□□□ -0.36
BEST3-209ENST00000548658 HLA-CQ95604 372 aa12.82□□□□□ -0.36
BEST3-209ENST00000548658 MRPL38Q96DV4 380 aaKnown RBP12.82□□□□□ -0.36
BEST3-209ENST00000548658 NIFKQ9BYG3 293 aaKnown RBP12.82□□□□□ -0.36
BEST3-209ENST00000548658 UNC45AQ9H3U1 944 aa12.82□□□□□ -0.36
BEST3-209ENST00000548658 LRFN2Q9ULH4 789 aa12.82□□□□□ -0.36
BEST3-209ENST00000548658 TTC3P53804 2025 aa12.82□□□□□ -0.36
BEST3-209ENST00000548658 ADGRA3Q8IWK6 1321 aa12.82□□□□□ -0.36
BEST3-209ENST00000548658 SIP14410 1827 aa12.81□□□□□ -0.36
BEST3-209ENST00000548658 DENND3A2RUS2 1198 aa12.81□□□□□ -0.36
BEST3-209ENST00000548658 C5orf67F2Z3F1 127 aa12.81□□□□□ -0.36
BEST3-209ENST00000548658 ZNF862O60290 1169 aa12.81□□□□□ -0.36
BEST3-209ENST00000548658 CCNT1O60563 726 aaKnown RBP12.81□□□□□ -0.36
BEST3-209ENST00000548658 BAG4O95429 457 aaKnown RBP12.81□□□□□ -0.36
BEST3-209ENST00000548658 KRT2P35908 639 aa12.81□□□□□ -0.36
BEST3-209ENST00000548658 BMPR1AP36894 532 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms