RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 EDEM3Q9BZQ6 932 aa14.83□□□□□ -0.04
PTCH1-215ENST00000547672 RRAGDQ9NQL2 400 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-215ENST00000547672 MORF4L1Q9UBU8 362 aa14.83□□□□□ -0.04
PTCH1-215ENST00000547672 GOLGB1Q14789 3259 aaKnown RBP14.83□□□□□ -0.04
PTCH1-215ENST00000547672 DNAJC25-GNG10A0A024R161 153 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 GOLGA6L9A6NEM1 432 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 MANSC4A6NHS7 340 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-215ENST00000547672 BACH1O14867 736 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 SLC16A3O15427 465 aaKnown RBP14.82□□□□□ -0.04
PTCH1-215ENST00000547672 ZSCAN12O43309 604 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 ATG7O95352 703 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 SUPT20HL2P0C7V6 817 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 GJA5P36382 358 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 ACTR2P61160 394 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 LRRC41Q15345 812 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 ZCWPW2Q504Y3 356 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 FIGNQ5HY92 759 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 ARMCX5Q6P1M9 558 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 ABHD15Q6UXT9 468 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 ZNF720Q7Z2F6 126 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 FRMD5Q7Z6J6 570 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 ZNF467Q7Z7K2 595 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-215ENST00000547672 ZC3H3Q8IXZ2 948 aaKnown RBP14.82□□□□□ -0.04
PTCH1-215ENST00000547672 HPS3Q969F9 1004 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 HVCN1Q96D96 273 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 ERGIC2Q96RQ1 377 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 BAG1Q99933 345 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-215ENST00000547672 KCTD10Q9H3F6 313 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 ST6GALNAC4Q9H4F1 302 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 INTS13Q9NVM9 706 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 ZNHIT6Q9NWK9 470 aaKnown RBP14.82□□□□□ -0.04
PTCH1-215ENST00000547672 TBC1D7Q9P0N9 293 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 EXOC7Q9UPT5 735 aa14.82□□□□□ -0.04
PTCH1-215ENST00000547672 SOWAHBA6NEL2 793 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 TEX33O43247 280 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 HIP1RO75146 1068 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 DGAT1O75907 488 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 RGS20O76081 388 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 CCNE2O96020 404 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 PLS3P13797 630 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 MAPK4P31152 587 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 RTP1P59025 263 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 DNTTIP2Q5QJE6 756 aaKnown RBP14.81□□□□□ -0.04
PTCH1-215ENST00000547672 WDR78Q5VTH9 848 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 SWSAP1Q6NVH7 229 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 SEPT14Q6ZU15 432 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 TMTC1Q8IUR5 882 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 MORC4Q8TE76 937 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 SEPT1Q8WYJ6 367 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 FAM167AQ96KS9 214 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 PCMTD1Q96MG8 357 aaPredicted RBP14.81□□□□□ -0.04
PTCH1-215ENST00000547672 PURBQ96QR8 312 aaKnown RBP14.81□□□□□ -0.04
PTCH1-215ENST00000547672 ACCSQ96QU6 501 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 MKNK1Q9BUB5 465 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 NUCKS1Q9H1E3 243 aaKnown RBP14.81□□□□□ -0.04
PTCH1-215ENST00000547672 TMX1Q9H3N1 280 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 NDST4Q9H3R1 872 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 MLXIPQ9HAP2 919 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 GABBR1Q9UBS5 961 aa14.81□□□□□ -0.04
PTCH1-215ENST00000547672 DIS3Q9Y2L1 958 aaKnown RBP14.81□□□□□ -0.04
PTCH1-215ENST00000547672 LUC7L2Q9Y383 392 aaKnown RBP14.81□□□□□ -0.04
PTCH1-215ENST00000547672 BTBD19C9JJ37 291 aa14.8□□□□□ -0.04
PTCH1-215ENST00000547672 OFD1O75665 1012 aa14.8□□□□□ -0.04
PTCH1-215ENST00000547672 EPB41P11171 864 aaKnown RBP14.8□□□□□ -0.04
PTCH1-215ENST00000547672 SLC26A2P50443 739 aa14.8□□□□□ -0.04
PTCH1-215ENST00000547672 CCZ1BP86790 482 aa14.8□□□□□ -0.04
PTCH1-215ENST00000547672 CCZ1P86791 482 aaPredicted RBP14.8□□□□□ -0.04
PTCH1-215ENST00000547672 LRMPQ12912 555 aa14.8□□□□□ -0.04
PTCH1-215ENST00000547672 Q3C1V9 767 aa14.8□□□□□ -0.04
PTCH1-215ENST00000547672 METTL7BQ6UX53 244 aa14.8□□□□□ -0.04
PTCH1-215ENST00000547672 NELFCDQ8IXH7 590 aa14.8□□□□□ -0.04
PTCH1-215ENST00000547672 SYCP3Q8IZU3 236 aa14.8□□□□□ -0.04
PTCH1-215ENST00000547672 OR8K1Q8NGG5 319 aa14.8□□□□□ -0.04
PTCH1-215ENST00000547672 TMEM174Q8WUU8 243 aa14.8□□□□□ -0.04
PTCH1-215ENST00000547672 CEP170P1Q96L14 293 aa14.8□□□□□ -0.04
PTCH1-215ENST00000547672 IFT74Q96LB3 600 aa14.8□□□□□ -0.04
PTCH1-215ENST00000547672 GBP3Q9H0R5 595 aa14.8□□□□□ -0.04
PTCH1-215ENST00000547672 AZI2Q9H6S1 392 aa14.8□□□□□ -0.04
PTCH1-215ENST00000547672 ZNF302Q9NR11 478 aa14.8□□□□□ -0.04
PTCH1-215ENST00000547672 ARMCX3Q9UH62 379 aaPredicted RBP14.8□□□□□ -0.04
PTCH1-215ENST00000547672 FRMD4BQ9Y2L6 1034 aa14.8□□□□□ -0.04
PTCH1-215ENST00000547672 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.8□□□□□ -0.04
PTCH1-215ENST00000547672 A0A1W2PQJ5 194 aa14.79□□□□□ -0.04
PTCH1-215ENST00000547672 COBLO75128 1261 aa14.79□□□□□ -0.04
PTCH1-215ENST00000547672 POTEJP0CG39 1038 aa14.79□□□□□ -0.04
PTCH1-215ENST00000547672 NR2F2P24468 414 aa14.79□□□□□ -0.04
PTCH1-215ENST00000547672 RFC5P40937 340 aa14.79□□□□□ -0.04
PTCH1-215ENST00000547672 CACNB1Q02641 598 aaPredicted RBP14.79□□□□□ -0.04
PTCH1-215ENST00000547672 RBL2Q08999 1139 aa14.79□□□□□ -0.04
PTCH1-215ENST00000547672 TTLL4Q14679 1199 aa14.79□□□□□ -0.04
PTCH1-215ENST00000547672 PPP2R5AQ15172 486 aa14.79□□□□□ -0.04
PTCH1-215ENST00000547672 LRRC55Q6ZSA7 311 aa14.79□□□□□ -0.04
PTCH1-215ENST00000547672 CYFIP1Q7L576 1253 aa14.79□□□□□ -0.04
PTCH1-215ENST00000547672 SLC9A9Q8IVB4 645 aa14.79□□□□□ -0.04
PTCH1-215ENST00000547672 MSL3Q8N5Y2 521 aaKnown RBP14.79□□□□□ -0.04
PTCH1-215ENST00000547672 SCFD2Q8WU76 684 aa14.79□□□□□ -0.04
PTCH1-215ENST00000547672 SPIRE2Q8WWL2 714 aa14.79□□□□□ -0.04
PTCH1-215ENST00000547672 JPH2Q9BR39 696 aaPredicted RBP14.79□□□□□ -0.04
PTCH1-215ENST00000547672 NTPCRQ9BSD7 190 aaKnown RBP14.79□□□□□ -0.04
PTCH1-215ENST00000547672 TXNRD2Q9NNW7 524 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms