RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 SFI1A8K8P3 1242 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 GIPC1O14908 333 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 ESRRAP11474 423 aaPredicted RBP13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 ZNF211Q13398 564 aaPredicted RBP13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 HSP90AA5PQ58FG0 334 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 PPP1R18Q6NYC8 613 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 DNAJC24Q6P3W2 148 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 TRIM50Q86XT4 487 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 CCDC125Q86Z20 511 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 ATP6V0A1Q93050 837 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 GINS2Q9Y248 185 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 NEXMIFQ5QGS0 1516 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 TSPOAP1O95153 1857 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 GARSP41250 739 aaKnown RBP13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 CORO7P57737 925 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 PTPAQ15257 358 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 BRDTQ58F21 947 aaPredicted RBP13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 FBXW10Q5XX13 1052 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 LRIG3Q6UXM1 1119 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 ANGPTL2Q9UKU9 493 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 WDR91A4D1P6 747 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 RASA4BC9J798 803 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 MCF2LO15068 1137 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 RASA4O43374 803 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 LMNAP02545 664 aaKnown RBP13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 CAV1Q03135 178 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 TBC1D9BQ66K14 1250 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 FAM47EQ6ZV65 393 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 GSDMBQ8TAX9 411 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 HOOK2Q96ED9 719 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 TRIM6Q9C030 488 aaPredicted RBP13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 POTEB3A0JP26 581 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 POTECB2RU33 542 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 ZBTB5O15062 677 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 YARSP54577 528 aaKnown RBP13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 PDE1BQ01064 536 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 NR1H3Q13133 447 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 POTEBQ6S5H4 581 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 MMGT1Q8N4V1 131 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 MS4A14Q96JA4 679 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 SENP2Q9HC62 589 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 AMACRQ9UHK6 382 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 MINPP1Q9UNW1 487 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 PPP1R3GB7ZBB8 358 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 TCP10L2B9ZVM9 353 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 BASP1P80723 227 aaKnown RBP13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 COG7P83436 770 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 SLC18A3Q16572 532 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 DBN1Q16643 649 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 ZNF512BQ96KM6 892 aaPredicted RBP13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 PPIP5K2O43314 1243 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 SRRM1Q8IYB3 904 aaKnown RBP13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 SLC44A5Q8NCS7 719 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 RFFLQ8WZ73 363 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 SAYSD1Q9NPB0 183 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 RBM12Q9NTZ6 932 aaKnown RBP13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 HPSEQ9Y251 543 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 PDE6BP35913 854 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 DYNLT1P63172 113 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 GRIN1Q05586 938 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 MYO1EQ12965 1108 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 CLEC4GQ6UXB4 293 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 C7orf25Q9BPX7 421 aa13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 DHX36Q9H2U1 1008 aaKnown RBP13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 CNOT8Q9UFF9 292 aaKnown RBP13.14□□□□□ -0.31
NPC1L1-204ENST00000546276 GDF11O95390 407 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 DHX34Q14147 1143 aaKnown RBP13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 DRAP1Q14919 205 aaPredicted RBP13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 BBS9Q3SYG4 887 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 WDR93Q6P2C0 686 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 TMC4Q7Z404 712 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 PYROXD1Q8WU10 500 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 HESX1Q9UBX0 185 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 PDS5AQ29RF7 1337 aaKnown RBP13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 GOLGA8SH3BPF8 625 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 IPO5O00410 1097 aaKnown RBP13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 BBOX1O75936 387 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 CPP00450 1065 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 POLE2P56282 527 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 EPM2AIP1Q7L775 607 aaPredicted RBP13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 PDIK1LQ8N165 341 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 PROCA1Q8NCQ7 364 aaPredicted RBP13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 GIMAP8Q8ND71 665 aaPredicted RBP13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 THOC1Q96FV9 657 aaKnown RBP13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 ANAPC7Q9UJX3 599 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 TTLL3Q9Y4R7 772 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 CAMSAP1Q5T5Y3 1602 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 A0A1W2PQJ5 194 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 TDP2O95551 362 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 BRAFP15056 766 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 HOXA13P31271 388 aaPredicted RBP13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 LSP1P33241 339 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 BYSLQ13895 437 aaKnown RBP13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 PIGOQ8TEQ8 1089 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 SEPT9Q9UHD8 586 aaPredicted RBP13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 ASPHQ12797 758 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 SAAL1Q96ER3 474 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 TMEM60Q9H2L4 133 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 ECT2Q9H8V3 914 aa13.13□□□□□ -0.31
NPC1L1-204ENST00000546276 IFT122Q9HBG6 1241 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms