RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 EIF3HO15372 352 aaKnown RBP eCLIP10.65□□□□□ -0.7
TRAF1-203ENST00000546084 IFNB1P01574 187 aa10.65□□□□□ -0.7
TRAF1-203ENST00000546084 AFPP02771 609 aaKnown RBP10.65□□□□□ -0.7
TRAF1-203ENST00000546084 NR3C1P04150 777 aa10.65□□□□□ -0.7
TRAF1-203ENST00000546084 CATSPER3Q86XQ3 398 aa10.65□□□□□ -0.7
TRAF1-203ENST00000546084 MSL3Q8N5Y2 521 aaKnown RBP10.65□□□□□ -0.7
TRAF1-203ENST00000546084 PRMT6Q96LA8 375 aaPredicted RBP10.65□□□□□ -0.7
TRAF1-203ENST00000546084 HEMGNQ9BXL5 484 aa10.65□□□□□ -0.7
TRAF1-203ENST00000546084 ZNF341Q9BYN7 854 aa10.65□□□□□ -0.7
TRAF1-203ENST00000546084 BLOC1S4Q9NUP1 217 aa10.65□□□□□ -0.7
TRAF1-203ENST00000546084 SLIT3O75094 1523 aa10.65□□□□□ -0.7
TRAF1-203ENST00000546084 PTK2Q05397 1052 aa10.65□□□□□ -0.7
TRAF1-203ENST00000546084 MICALCLQ6ZW33 695 aa10.65□□□□□ -0.7
TRAF1-203ENST00000546084 CYFIP1Q7L576 1253 aa10.65□□□□□ -0.7
TRAF1-203ENST00000546084 ZNF507Q8TCN5 953 aa10.65□□□□□ -0.7
TRAF1-203ENST00000546084 PURBQ96QR8 312 aaKnown RBP10.65□□□□□ -0.7
TRAF1-203ENST00000546084 GPR75-ASB3A0A0A6YYF3 556 aa10.65□□□□□ -0.71
TRAF1-203ENST00000546084 KLRC4O43908 158 aa10.65□□□□□ -0.71
TRAF1-203ENST00000546084 DDR1Q08345 913 aa10.65□□□□□ -0.71
TRAF1-203ENST00000546084 PPP2R5AQ15172 486 aa10.65□□□□□ -0.71
TRAF1-203ENST00000546084 ZKSCAN8Q15776 578 aaPredicted RBP10.65□□□□□ -0.71
TRAF1-203ENST00000546084 SYCP2LQ5T4T6 812 aa10.65□□□□□ -0.71
TRAF1-203ENST00000546084 CREG2Q8IUH2 290 aa10.65□□□□□ -0.71
TRAF1-203ENST00000546084 TSEN2Q8NCE0 465 aaKnown RBP10.65□□□□□ -0.71
TRAF1-203ENST00000546084 TTC16Q8NEE8 873 aa10.65□□□□□ -0.71
TRAF1-203ENST00000546084 SLC30A5Q8TAD4 765 aa10.65□□□□□ -0.71
TRAF1-203ENST00000546084 ZIM3Q96PE6 472 aa10.65□□□□□ -0.71
TRAF1-203ENST00000546084 TRIM51Q9BSJ1 452 aa10.65□□□□□ -0.71
TRAF1-203ENST00000546084 DHX36Q9H2U1 1008 aaKnown RBP10.65□□□□□ -0.71
TRAF1-203ENST00000546084 GPRC5CQ9NQ84 441 aa10.65□□□□□ -0.71
TRAF1-203ENST00000546084 STK17AQ9UEE5 414 aa10.65□□□□□ -0.71
TRAF1-203ENST00000546084 CD2APQ9Y5K6 639 aa10.65□□□□□ -0.71
TRAF1-203ENST00000546084 MYH8P13535 1937 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 ARFGEF2Q9Y6D5 1785 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 GOLGA6L10A0A0M3HER8 536 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 LAD1O00515 517 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 SLC16A4O15374 487 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 DAPK3O43293 454 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 ALDH1B1P30837 517 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 STAT2P52630 851 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 PAK2Q13177 524 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 UAP1Q16222 522 aaPredicted RBP10.64□□□□□ -0.71
TRAF1-203ENST00000546084 HAUS1Q96CS2 278 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 BTBD6Q96KE9 485 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 RUSC1Q9BVN2 902 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 SPZ1Q9BXG8 430 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 DNAJC12Q9UKB3 198 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 NWD2Q9ULI1 1742 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 FECHP22830 423 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 NPEPPSP55786 919 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 EMBQ6PCB8 327 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 TNFRSF25Q93038 417 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 JPH2Q9BR39 696 aaPredicted RBP10.64□□□□□ -0.71
TRAF1-203ENST00000546084 MMTAG2Q9BU76 263 aaKnown RBP10.64□□□□□ -0.71
TRAF1-203ENST00000546084 SH2D4AQ9H788 454 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 SH3GLB2Q9NR46 395 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 AMFRQ9UKV5 643 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 NOVA2Q9UNW9 492 aaKnown RBP10.64□□□□□ -0.71
TRAF1-203ENST00000546084 ATRNO75882 1429 aa10.64□□□□□ -0.71
TRAF1-203ENST00000546084 EIF4E1BA6NMX2 242 aaKnown RBP10.63□□□□□ -0.71
TRAF1-203ENST00000546084 GUCY2CP25092 1073 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 KCNB1Q14721 858 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 MCTP2Q6DN12 878 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 CCDC91Q7Z6B0 441 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 CDAN1Q8IWY9 1227 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 JDP2Q8WYK2 163 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 AGBL1Q96MI9 1066 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 EIF2AK1Q9BQI3 630 aaKnown RBP10.63□□□□□ -0.71
TRAF1-203ENST00000546084 PAGR1Q9BTK6 254 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 COA1Q9GZY4 146 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 MYO1FO00160 1098 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 ZNF263O14978 683 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 FAM153BP0C7A2 387 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 TMOD1P28289 359 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 KCNJ1P48048 391 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 SEPT7Q16181 437 aaKnown RBP10.63□□□□□ -0.71
TRAF1-203ENST00000546084 FAM153CQ494X1 144 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 SEZ6Q53EL9 994 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 PLA2G4FQ68DD2 849 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 STXBP4Q6ZWJ1 553 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 GUF1Q8N442 669 aaKnown RBP10.63□□□□□ -0.71
TRAF1-203ENST00000546084 CCDC97Q96F63 343 aaPredicted RBP10.63□□□□□ -0.71
TRAF1-203ENST00000546084 OSGEPQ9NPF4 335 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 FAM153AQ9UHL3 310 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 BAZ2AQ9UIF9 1905 aaKnown RBP10.63□□□□□ -0.71
TRAF1-203ENST00000546084 MYZAPP0CAP1 466 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 DRAP1Q14919 205 aaPredicted RBP10.63□□□□□ -0.71
TRAF1-203ENST00000546084 PDXDC1Q6P996 788 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 PNMA8AQ86V59 439 aaPredicted RBP10.63□□□□□ -0.71
TRAF1-203ENST00000546084 AENQ8WTP8 325 aaKnown RBP10.63□□□□□ -0.71
TRAF1-203ENST00000546084 GLG1Q92896 1179 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 MAGOHBQ96A72 148 aaKnown RBP10.63□□□□□ -0.71
TRAF1-203ENST00000546084 KLHL11Q9NVR0 708 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 SALL4Q9UJQ4 1053 aa10.63□□□□□ -0.71
TRAF1-203ENST00000546084 UTP11Q9Y3A2 253 aaKnown RBP10.63□□□□□ -0.71
TRAF1-203ENST00000546084 SERPING1P05155 500 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 NR1D1P20393 614 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 HNRNPH1P31943 449 aaKnown RBP10.62□□□□□ -0.71
TRAF1-203ENST00000546084 HSPA1LP34931 641 aa10.62□□□□□ -0.71
TRAF1-203ENST00000546084 MAP2K2P36507 400 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms