RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 POU5F1Q01860 360 aaKnown RBP15.44■□□□□ 0.06
SRP54-202ENST00000546080 SF3A3Q12874 501 aaKnown RBP eCLIP15.44■□□□□ 0.062e-10■■■■□ 21
SRP54-202ENST00000546080 DENND2CQ68D51 928 aa15.44■□□□□ 0.06
SRP54-202ENST00000546080 FMNL3Q8IVF7 1028 aa15.44■□□□□ 0.06
SRP54-202ENST00000546080 RBM46Q8TBY0 533 aaKnown RBP15.44■□□□□ 0.06
SRP54-202ENST00000546080 NEK9Q8TD19 979 aa15.44■□□□□ 0.06
SRP54-202ENST00000546080 ATXN2LQ8WWM7 1075 aaKnown RBP15.44■□□□□ 0.06
SRP54-202ENST00000546080 COA7Q96BR5 231 aa15.44■□□□□ 0.06
SRP54-202ENST00000546080 HOOK2Q96ED9 719 aa15.44■□□□□ 0.06
SRP54-202ENST00000546080 DDX25Q9UHL0 483 aaKnown RBP15.44■□□□□ 0.06
SRP54-202ENST00000546080 XIRP1Q702N8 1843 aaKnown RBP15.44■□□□□ 0.06
SRP54-202ENST00000546080 NPHP3-ACAD11A0A0J9YXS1 232 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 CFAP73A6NFT4 308 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 CCDC169A6NNP5 214 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 E9PMD0 336 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 NEBLO76041 1014 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 BAG3O95817 575 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 LDHBP07195 334 aaKnown RBP15.43■□□□□ 0.06
SRP54-202ENST00000546080 PAX7P23759 505 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 MMP13P45452 471 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 PMS2P54278 862 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 NPEPPSP55786 919 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 DR1Q01658 176 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 ACCSLQ4AC99 568 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 CRELD2Q6UXH1 353 aaPredicted RBP15.43■□□□□ 0.06
SRP54-202ENST00000546080 GPBP1Q86WP2 473 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 LRRC34Q8IZ02 419 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 PGM2Q96G03 612 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 ZHX3Q9H4I2 956 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 ARMCX3Q9UH62 379 aaPredicted RBP15.43■□□□□ 0.06
SRP54-202ENST00000546080 INTUQ9ULD6 942 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 TTC7AQ9ULT0 858 aaPredicted RBP15.43■□□□□ 0.06
SRP54-202ENST00000546080 NENFQ9UMX5 172 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 LTBP4Q8N2S1 1624 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 SNED1Q8TER0 1413 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 NAV1Q8NEY1 1877 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 GOLGA6L10A0A0M3HER8 536 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 TLDC2A0PJX2 215 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 SPDYE3A6NKU9 549 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 ECM2O94769 699 aaPredicted RBP15.43■□□□□ 0.06
SRP54-202ENST00000546080 KRT18P05783 430 aaKnown RBP15.43■□□□□ 0.06
SRP54-202ENST00000546080 CLTAP09496 248 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 PLA2G4BP0C869 781 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 PON1P27169 355 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 PTENP60484 403 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 PRPF4BQ13523 1007 aaKnown RBP15.43■□□□□ 0.06
SRP54-202ENST00000546080 DPY19L2P1Q6NXN4 242 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 FRMD5Q7Z6J6 570 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 PIGWQ7Z7B1 504 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 PNMA8AQ86V59 439 aaPredicted RBP15.43■□□□□ 0.06
SRP54-202ENST00000546080 MAPKAPK5Q8IW41 473 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 U2AF1L4Q8WU68 220 aaKnown RBP15.43■□□□□ 0.06
SRP54-202ENST00000546080 FAXDC2Q96IV6 333 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 NSRP1Q9H0G5 558 aaKnown RBP15.43■□□□□ 0.06
SRP54-202ENST00000546080 PABPC3Q9H361 631 aaKnown RBP15.43■□□□□ 0.06
SRP54-202ENST00000546080 INTS9Q9NV88 658 aaKnown RBP15.43■□□□□ 0.06
SRP54-202ENST00000546080 BTG4Q9NY30 223 aa15.43■□□□□ 0.06
SRP54-202ENST00000546080 RGS16O15492 202 aaPredicted RBP15.42■□□□□ 0.06
SRP54-202ENST00000546080 SLC8A3P57103 927 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 PPP2R5EQ16537 467 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 DCAF17Q5H9S7 520 aaPredicted RBP15.42■□□□□ 0.06
SRP54-202ENST00000546080 TRPM8Q7Z2W7 1104 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 TBC1D1Q86TI0 1168 aaPredicted RBP15.42■□□□□ 0.06
SRP54-202ENST00000546080 CCHCR1Q8TD31 782 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 FBXO41Q8TF61 875 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 GJA10Q969M2 543 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 ZNF622Q969S3 477 aaKnown RBP eCLIP15.42■□□□□ 0.067e-7■■□□□ 11.8
SRP54-202ENST00000546080 STAMBPL1Q96FJ0 436 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 ELAC2Q9BQ52 826 aaKnown RBP15.42■□□□□ 0.06
SRP54-202ENST00000546080 ERP44Q9BS26 406 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 TRIM6Q9C030 488 aaPredicted RBP15.42■□□□□ 0.06
SRP54-202ENST00000546080 ANKRD2Q9GZV1 360 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 AZI2Q9H6S1 392 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 RIOX1Q9H6W3 641 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 KIAA1024Q9UPX6 916 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 DAAM1Q9Y4D1 1078 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 SMIM23A6NLE4 172 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 USP17L5A8MUK1 530 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 DDX3XO00571 662 aaKnown RBP eCLIP15.42■□□□□ 0.062e-11■■■□□ 16.3
SRP54-202ENST00000546080 VIMP08670 466 aaKnown RBP15.42■□□□□ 0.06
SRP54-202ENST00000546080 XRCC5P13010 732 aaKnown RBP15.42■□□□□ 0.06
SRP54-202ENST00000546080 CDK8P49336 464 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 RIPK1Q13546 671 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 FAM133BQ5BKY9 247 aaKnown RBP15.42■□□□□ 0.06
SRP54-202ENST00000546080 HYIQ5T013 277 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 DUPD1Q68J44 220 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 NEDD1Q8NHV4 660 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 NAP1L3Q99457 506 aaPredicted RBP15.42■□□□□ 0.06
SRP54-202ENST00000546080 EPB41L4BQ9H329 900 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 EBF2Q9HAK2 575 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 ZDHHC18Q9NUE0 388 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 PCDHA12Q9UN75 941 aa15.42■□□□□ 0.06
SRP54-202ENST00000546080 DIS3Q9Y2L1 958 aaKnown RBP15.42■□□□□ 0.06
SRP54-202ENST00000546080 FRMPD2Q68DX3 1309 aaPredicted RBP15.42■□□□□ 0.06
SRP54-202ENST00000546080 DOT1LQ8TEK3 1739 aa15.41■□□□□ 0.06
SRP54-202ENST00000546080 CCDC189A1A4V9 331 aa15.41■□□□□ 0.06
SRP54-202ENST00000546080 MYCNP04198 464 aaPredicted RBP15.41■□□□□ 0.06
SRP54-202ENST00000546080 RPS8P62241 208 aaKnown RBP15.41■□□□□ 0.06
SRP54-202ENST00000546080 GSTO1P78417 241 aa15.41■□□□□ 0.06
SRP54-202ENST00000546080 MYO1EQ12965 1108 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms