RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 TTLL1O95922 423 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 GHRP10912 638 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 SLC9A1P19634 815 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 RPL13P26373 211 aaKnown RBP9.54□□□□□ -0.88
TDP1-204ENST00000545686 RDXP35241 583 aaKnown RBP9.54□□□□□ -0.88
TDP1-204ENST00000545686 GABPAQ06546 454 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 ENOX2Q16206 610 aaKnown RBP9.54□□□□□ -0.88
TDP1-204ENST00000545686 HOOK3Q86VS8 718 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 ADGRF4Q8IZF3 695 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 RBM46Q8TBY0 533 aaKnown RBP9.54□□□□□ -0.88
TDP1-204ENST00000545686 TLCD1Q96CP7 247 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 NAP1L3Q99457 506 aaPredicted RBP9.54□□□□□ -0.88
TDP1-204ENST00000545686 PSMD1Q99460 953 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 AP1M1Q9BXS5 423 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 TXLNGYQ9BZA5 131 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 POLD4Q9HCU8 107 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 SLC40A1Q9NP59 571 aa9.54□□□□□ -0.88
TDP1-204ENST00000545686 TYW1Q9NV66 732 aaKnown RBP9.54□□□□□ -0.88
TDP1-204ENST00000545686 TBX3O15119 743 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 DAPK3O43293 454 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 ACTN1P12814 892 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 POU5F1Q01860 360 aaKnown RBP9.53□□□□□ -0.88
TDP1-204ENST00000545686 IFFO1Q0D2I5 559 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 ODF2Q5BJF6 829 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 ANKRD20A8PQ5CZ79 823 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 ARSHQ5FYA8 562 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 GKAP1Q5VSY0 366 aaPredicted RBP9.53□□□□□ -0.88
TDP1-204ENST00000545686 DDX42Q86XP3 938 aaKnown RBP eCLIP9.53□□□□□ -0.88
TDP1-204ENST00000545686 LRRC47Q8N1G4 583 aaKnown RBP9.53□□□□□ -0.88
TDP1-204ENST00000545686 ERMNQ8TAM6 284 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 TBC1D22AQ8WUA7 517 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 SEC16BQ96JE7 1060 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 PSTPIP2Q9H939 334 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 CD209Q9NNX6 404 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 SIX2Q9NPC8 291 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 AMACRQ9UHK6 382 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 AMFRQ9UKV5 643 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 NUDT17P0C025 328 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 LMNB1P20700 586 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 PTENP60484 403 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 KRT71Q3SY84 523 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 PREPLQ4J6C6 727 aaPredicted RBP9.53□□□□□ -0.88
TDP1-204ENST00000545686 CROCCP2Q86T23 111 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 DAAM2Q86T65 1068 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 KCTD17Q8N5Z5 321 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 OR2W6PQ8NHA6 318 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 RFFLQ8WZ73 363 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 RAPGEF5Q92565 580 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 ZKSCAN4Q969J2 545 aaPredicted RBP9.53□□□□□ -0.88
TDP1-204ENST00000545686 CCDC114Q96M63 670 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 FMO2Q99518 471 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 CARD9Q9H257 536 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 KDM4CQ9H3R0 1056 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 KANSL2Q9H9L4 492 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 GPCPD1Q9NPB8 672 aa9.53□□□□□ -0.88
TDP1-204ENST00000545686 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.53□□□□□ -0.88
TDP1-204ENST00000545686 NPHP3-ACAD11A0A0J9YXS1 232 aa9.52□□□□□ -0.89
TDP1-204ENST00000545686 GOLGA6L10A0A0M3HER8 536 aa9.52□□□□□ -0.89
TDP1-204ENST00000545686 FAM187AA6NFU0 413 aa9.52□□□□□ -0.89
TDP1-204ENST00000545686 TTI1O43156 1089 aa9.52□□□□□ -0.89
TDP1-204ENST00000545686 TMEM253P0C7T8 217 aa9.52□□□□□ -0.89
TDP1-204ENST00000545686 CCDC172P0C7W6 258 aa9.52□□□□□ -0.89
TDP1-204ENST00000545686 GBP1P32455 592 aa9.52□□□□□ -0.89
TDP1-204ENST00000545686 DHX9Q08211 1270 aaKnown RBP9.52□□□□□ -0.89
TDP1-204ENST00000545686 AP3B2Q13367 1082 aa9.52□□□□□ -0.89
TDP1-204ENST00000545686 GIT2Q14161 759 aa9.52□□□□□ -0.89
TDP1-204ENST00000545686 NFIL3Q16649 462 aa9.52□□□□□ -0.89
TDP1-204ENST00000545686 SYT2Q8N9I0 419 aaPredicted RBP9.52□□□□□ -0.89
TDP1-204ENST00000545686 SLC30A5Q8TAD4 765 aa9.52□□□□□ -0.89
TDP1-204ENST00000545686 SGSM3Q96HU1 749 aa9.52□□□□□ -0.89
TDP1-204ENST00000545686 OSBPL7Q9BZF2 842 aa9.52□□□□□ -0.89
TDP1-204ENST00000545686 GOLPH3Q9H4A6 298 aa9.52□□□□□ -0.89
TDP1-204ENST00000545686 GCNT4Q9P109 453 aa9.52□□□□□ -0.89
TDP1-204ENST00000545686 SRP68Q9UHB9 627 aaKnown RBP9.52□□□□□ -0.89
TDP1-204ENST00000545686 NOVA2Q9UNW9 492 aaKnown RBP9.52□□□□□ -0.89
TDP1-204ENST00000545686 DDX3XO00571 662 aaKnown RBP eCLIP9.51□□□□□ -0.89
TDP1-204ENST00000545686 KCNQ2O43526 872 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 C21orf2O43822 256 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 MED24O75448 989 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 DNAJC8O75937 253 aaPredicted RBP9.51□□□□□ -0.89
TDP1-204ENST00000545686 NR3C1P04150 777 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 ITGA4P13612 1032 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 ATP2B4P23634 1241 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 RPA1P27694 616 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 HOXD13P35453 343 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 FLT3P36888 993 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 STAT1P42224 750 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 CASP5P51878 434 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 MAGOHP61326 146 aaKnown RBP9.51□□□□□ -0.89
TDP1-204ENST00000545686 SPIRE1Q08AE8 756 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 XRCC4Q13426 336 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 BYSLQ13895 437 aaKnown RBP9.51□□□□□ -0.89
TDP1-204ENST00000545686 DHX34Q14147 1143 aaKnown RBP9.51□□□□□ -0.89
TDP1-204ENST00000545686 NEDD9Q14511 834 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 SNCBQ16143 134 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 ERMARDQ5T6L9 678 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 WLSQ5T9L3 541 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 ATP8B4Q8TF62 1192 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 SLC35C1Q96A29 364 aa9.51□□□□□ -0.89
TDP1-204ENST00000545686 MAGOHBQ96A72 148 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms