RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 COLGALT1Q8NBJ5 622 aa14.69□□□□□ -0.06
USP28-212ENST00000544750 MICAL1Q8TDZ2 1067 aa14.69□□□□□ -0.06
USP28-212ENST00000544750 TMEM40Q8WWA1 233 aa14.69□□□□□ -0.06
USP28-212ENST00000544750 ATOH1Q92858 354 aaPredicted RBP14.69□□□□□ -0.06
USP28-212ENST00000544750 LZTS2Q9BRK4 669 aa14.69□□□□□ -0.06
USP28-212ENST00000544750 CDHR5Q9HBB8 845 aa14.69□□□□□ -0.06
USP28-212ENST00000544750 AAASQ9NRG9 546 aa14.69□□□□□ -0.06
USP28-212ENST00000544750 KCNH7Q9NS40 1196 aa14.69□□□□□ -0.06
USP28-212ENST00000544750 TYW1Q9NV66 732 aaKnown RBP14.69□□□□□ -0.06
USP28-212ENST00000544750 TRPC6Q9Y210 931 aa14.69□□□□□ -0.06
USP28-212ENST00000544750 LZTS1Q9Y250 596 aa14.69□□□□□ -0.06
USP28-212ENST00000544750 NOC2LQ9Y3T9 749 aaKnown RBP14.69□□□□□ -0.06
USP28-212ENST00000544750 PCDHB7Q9Y5E2 793 aa14.69□□□□□ -0.06
USP28-212ENST00000544750 NFASCO94856 1347 aa14.68□□□□□ -0.06
USP28-212ENST00000544750 IGKV6D-21A0A0A0MT36 114 aa14.68□□□□□ -0.06
USP28-212ENST00000544750 TBKBP1A7MCY6 615 aa14.68□□□□□ -0.06
USP28-212ENST00000544750 H0Y858 1186 aa14.68□□□□□ -0.06
USP28-212ENST00000544750 GSPT1P15170 499 aaKnown RBP14.68□□□□□ -0.06
USP28-212ENST00000544750 KIF5BP33176 963 aa14.68□□□□□ -0.06
USP28-212ENST00000544750 STAT5BP51692 787 aa14.68□□□□□ -0.06
USP28-212ENST00000544750 ACTR2P61160 394 aa14.68□□□□□ -0.06
USP28-212ENST00000544750 FAM189BP81408 668 aa14.68□□□□□ -0.06
USP28-212ENST00000544750 PLCB3Q01970 1234 aa14.68□□□□□ -0.06
USP28-212ENST00000544750 NFX1Q12986 1120 aaKnown RBP14.68□□□□□ -0.06
USP28-212ENST00000544750 SLC24A5Q71RS6 500 aa14.68□□□□□ -0.06
USP28-212ENST00000544750 KIAA0319LQ8IZA0 1049 aa14.68□□□□□ -0.06
USP28-212ENST00000544750 CTCFLQ8NI51 663 aaPredicted RBP14.68□□□□□ -0.06
USP28-212ENST00000544750 CYP2W1Q8TAV3 490 aa14.68□□□□□ -0.06
USP28-212ENST00000544750 TNPO1Q92973 898 aaKnown RBP14.68□□□□□ -0.06
USP28-212ENST00000544750 ADAM2Q99965 735 aa14.68□□□□□ -0.06
USP28-212ENST00000544750 MXRA8Q9BRK3 442 aa14.68□□□□□ -0.06
USP28-212ENST00000544750 AZI2Q9H6S1 392 aa14.68□□□□□ -0.06
USP28-212ENST00000544750 C1orf112Q9NSG2 853 aa14.68□□□□□ -0.06
USP28-212ENST00000544750 TMEM260Q9NX78 707 aa14.68□□□□□ -0.06
USP28-212ENST00000544750 SEC63Q9UGP8 760 aaKnown RBP14.68□□□□□ -0.06
USP28-212ENST00000544750 PCDHA6Q9UN73 950 aa14.68□□□□□ -0.06
USP28-212ENST00000544750 PCDHA8Q9Y5H6 950 aa14.68□□□□□ -0.06
USP28-212ENST00000544750 GALR2O43603 387 aaPredicted RBP14.67□□□□□ -0.06
USP28-212ENST00000544750 RPS6KA5O75582 802 aa14.67□□□□□ -0.06
USP28-212ENST00000544750 TECP42680 631 aa14.67□□□□□ -0.06
USP28-212ENST00000544750 ITGB3BPQ13352 177 aaPredicted RBP14.67□□□□□ -0.06
USP28-212ENST00000544750 THNSL1Q8IYQ7 743 aa14.67□□□□□ -0.06
USP28-212ENST00000544750 CMTR1Q8N1G2 835 aaKnown RBP14.67□□□□□ -0.06
USP28-212ENST00000544750 MRPS27Q92552 414 aaKnown RBP14.67□□□□□ -0.06
USP28-212ENST00000544750 MTA3Q9BTC8 594 aa14.67□□□□□ -0.06
USP28-212ENST00000544750 RNF19AQ9NV58 838 aa14.67□□□□□ -0.06
USP28-212ENST00000544750 ST3GAL5Q9UNP4 418 aa14.67□□□□□ -0.06
USP28-212ENST00000544750 SPDYE3A6NKU9 549 aa14.66□□□□□ -0.06
USP28-212ENST00000544750 HIDE1A8MVS5 230 aa14.66□□□□□ -0.06
USP28-212ENST00000544750 ZBTB42B2RXF5 422 aa14.66□□□□□ -0.06
USP28-212ENST00000544750 ARP10275 920 aa14.66□□□□□ -0.06
USP28-212ENST00000544750 HOXB8P17481 243 aaPredicted RBP14.66□□□□□ -0.06
USP28-212ENST00000544750 KLRC1P26715 233 aa14.66□□□□□ -0.06
USP28-212ENST00000544750 PDE4AP27815 886 aa14.66□□□□□ -0.06
USP28-212ENST00000544750 NBL1P41271 181 aa14.66□□□□□ -0.06
USP28-212ENST00000544750 GNAQP50148 359 aa14.66□□□□□ -0.06
USP28-212ENST00000544750 SLC26A2P50443 739 aa14.66□□□□□ -0.06
USP28-212ENST00000544750 FOXK2Q01167 660 aa14.66□□□□□ -0.06
USP28-212ENST00000544750 APOBRQ0VD83 1088 aa14.66□□□□□ -0.06
USP28-212ENST00000544750 COL9A3Q14050 684 aaPredicted RBP14.66□□□□□ -0.06
USP28-212ENST00000544750 DSC3Q14574 896 aa14.66□□□□□ -0.06
USP28-212ENST00000544750 SPOUT1Q5T280 376 aaKnown RBP14.66□□□□□ -0.06
USP28-212ENST00000544750 PLPP4Q5VZY2 271 aa14.66□□□□□ -0.06
USP28-212ENST00000544750 LRRC55Q6ZSA7 311 aa14.66□□□□□ -0.06
USP28-212ENST00000544750 ASCL5Q7RTU5 278 aa14.66□□□□□ -0.06
USP28-212ENST00000544750 ELAC1Q9H777 363 aaKnown RBP14.66□□□□□ -0.06
USP28-212ENST00000544750 RNF216Q9NWF9 866 aaPredicted RBP14.66□□□□□ -0.06
USP28-212ENST00000544750 TMEM161AQ9NX61 479 aa14.66□□□□□ -0.06
USP28-212ENST00000544750 CDH22Q9UJ99 828 aa14.66□□□□□ -0.06
USP28-212ENST00000544750 COL1A2P08123 1366 aa14.65□□□□□ -0.06
USP28-212ENST00000544750 DENND3A2RUS2 1198 aa14.65□□□□□ -0.06
USP28-212ENST00000544750 HBP1O60381 514 aa14.65□□□□□ -0.06
USP28-212ENST00000544750 BRD1O95696 1058 aa14.65□□□□□ -0.06
USP28-212ENST00000544750 SRGAP2BP0DMP2 458 aa14.65□□□□□ -0.06
USP28-212ENST00000544750 FGFR1P11362 822 aa14.65□□□□□ -0.06
USP28-212ENST00000544750 LAG3P18627 525 aa14.65□□□□□ -0.06
USP28-212ENST00000544750 CHMLP26374 656 aa14.65□□□□□ -0.06
USP28-212ENST00000544750 TTC22Q5TAA0 569 aa14.65□□□□□ -0.06
USP28-212ENST00000544750 ABHD15Q6UXT9 468 aa14.65□□□□□ -0.06
USP28-212ENST00000544750 FAM228AQ86W67 206 aa14.65□□□□□ -0.06
USP28-212ENST00000544750 TMEM105Q8N8V8 129 aa14.65□□□□□ -0.06
USP28-212ENST00000544750 KREMEN2Q8NCW0 462 aa14.65□□□□□ -0.06
USP28-212ENST00000544750 MAP4K1Q92918 833 aa14.65□□□□□ -0.06
USP28-212ENST00000544750 CASD1Q96PB1 797 aa14.65□□□□□ -0.06
USP28-212ENST00000544750 APOL5Q9BWW9 433 aa14.65□□□□□ -0.06
USP28-212ENST00000544750 AGO4Q9HCK5 861 aaKnown RBP14.65□□□□□ -0.06
USP28-212ENST00000544750 NGRNQ9NPE2 291 aaKnown RBP14.65□□□□□ -0.06
USP28-212ENST00000544750 SORCS3Q9UPU3 1222 aa14.65□□□□□ -0.06
USP28-212ENST00000544750 GVINP1Q7Z2Y8 2422 aa14.65□□□□□ -0.06
USP28-212ENST00000544750 C2orf16Q68DN1 1984 aa14.65□□□□□ -0.06
USP28-212ENST00000544750 hCG_1642624A0A1W2PR95 340 aa14.64□□□□□ -0.07
USP28-212ENST00000544750 PRR23AA6NEV1 266 aa14.64□□□□□ -0.07
USP28-212ENST00000544750 SH2B2O14492 632 aaPredicted RBP14.64□□□□□ -0.07
USP28-212ENST00000544750 GPR182O15218 404 aa14.64□□□□□ -0.07
USP28-212ENST00000544750 SGSM2O43147 1006 aa14.64□□□□□ -0.07
USP28-212ENST00000544750 CCNE2O96020 404 aa14.64□□□□□ -0.07
USP28-212ENST00000544750 ATP4AP20648 1035 aa14.64□□□□□ -0.07
USP28-212ENST00000544750 IBSPP21815 317 aaPredicted RBP14.64□□□□□ -0.07
USP28-212ENST00000544750 SP100P23497 879 aaPredicted RBP14.64□□□□□ -0.07
USP28-212ENST00000544750 CEP55Q53EZ4 464 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms