RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 ESCO1Q5FWF5 840 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 SPDYAQ5MJ70 313 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 IRGCQ6NXR0 463 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 SPATA21Q7Z572 469 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 MYOCDQ8IZQ8 938 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 LCORLQ8N3X6 602 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 METTL13Q8N6R0 699 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 TBC1D16Q8TBP0 767 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 INPP5DQ92835 1189 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 FAM192AQ9GZU8 254 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 DDX47Q9H0S4 455 aaKnown RBP5.42□□□□□ -1.54
LMO3-229ENST00000543721 NLRC4Q9NPP4 1024 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 LARSQ9P2J5 1176 aaKnown RBP5.42□□□□□ -1.54
LMO3-229ENST00000543721 LRP2BPQ9P2M1 347 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.42□□□□□ -1.54
LMO3-229ENST00000543721 TACC3Q9Y6A5 838 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 DOCK2Q92608 1830 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 RASGRF2O14827 1237 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 EPHB6O15197 1021 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 SLC26A4O43511 780 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 CCNB1P14635 433 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 FGFR2P21802 821 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 CTSWP56202 376 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 RNASE9P60153 205 aaKnown RBP5.41□□□□□ -1.54
LMO3-229ENST00000543721 KCNJ2P63252 427 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 DR1Q01658 176 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 TRADDQ15628 312 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 CNGA2Q16280 664 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 INTS8Q75QN2 995 aaKnown RBP5.41□□□□□ -1.54
LMO3-229ENST00000543721 TRMT10CQ7L0Y3 403 aaKnown RBP5.41□□□□□ -1.54
LMO3-229ENST00000543721 ASRGL1Q7L266 308 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 DDX42Q86XP3 938 aaKnown RBP eCLIP5.41□□□□□ -1.54
LMO3-229ENST00000543721 SRBD1Q8N5C6 995 aaKnown RBP5.41□□□□□ -1.54
LMO3-229ENST00000543721 LRRC57Q8N9N7 239 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 TPCN2Q8NHX9 752 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 MDM1Q8TC05 714 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 PRMT1Q99873 361 aaKnown RBP5.41□□□□□ -1.54
LMO3-229ENST00000543721 SPZ1Q9BXG8 430 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 VCX3BQ9H321 246 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 GOPCQ9HD26 462 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 VCX3AQ9NNX9 186 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.41□□□□□ -1.54
LMO3-229ENST00000543721 ADAM22Q9P0K1 906 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 AMACRQ9UHK6 382 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 SCOCQ9UIL1 159 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 MTMR7Q9Y216 660 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 TNS3Q68CZ2 1445 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 SPATA31A3Q5VYP0 1347 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 A0A087X0T9 212 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 TLDC2A0PJX2 215 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 PDE8AO60658 829 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 AP1G2O75843 785 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 FAM228BP0C875 321 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 CYP7A1P22680 504 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 PRKCIP41743 596 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 KCNMA1Q12791 1236 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 LRRC23Q53EV4 343 aaPredicted RBP5.41□□□□□ -1.54
LMO3-229ENST00000543721 THEMIS2Q5TEJ8 643 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 DUPD1Q68J44 220 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 LRRC55Q6ZSA7 311 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 DAAM2Q86T65 1068 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 ERICH1Q86X53 443 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 MIPOL1Q8TD10 442 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 STK32AQ8WU08 396 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 SERPINB12Q96P63 405 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 CARD9Q9H257 536 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 NEUROG2Q9H2A3 272 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 ABCF3Q9NUQ8 709 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 STOML1Q9UBI4 398 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 ADAMTS1Q9UHI8 967 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 BCORQ6W2J9 1755 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 GPR75-ASB3A0A0A6YYF3 556 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 BACH1O14867 736 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 TTI1O43156 1089 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 PRKAB2O43741 272 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 UNC5CO95185 931 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 EYA4O95677 639 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 FCER1AP12319 257 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 SKIP12755 728 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 CHRNA3P32297 505 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 LAMB3Q13751 1172 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 NONOQ15233 471 aaKnown RBP eCLIP5.41□□□□□ -1.54
LMO3-229ENST00000543721 KIAA1755Q5JYT7 1200 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 ALKBH5Q6P6C2 394 aaKnown RBP5.41□□□□□ -1.54
LMO3-229ENST00000543721 PPP1R21Q6ZMI0 780 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 ARHGEF18Q6ZSZ5 1173 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 ARHGAP22Q7Z5H3 698 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 ZNF467Q7Z7K2 595 aaPredicted RBP5.41□□□□□ -1.54
LMO3-229ENST00000543721 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.41□□□□□ -1.54
LMO3-229ENST00000543721 ENDOVQ8N8Q3 282 aaKnown RBP5.41□□□□□ -1.54
LMO3-229ENST00000543721 KIAA0895Q8NCT3 520 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 PIGOQ8TEQ8 1089 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 DDX12PQ92771 950 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 TUBB6Q9BUF5 446 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 AP1M1Q9BXS5 423 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 DPH5Q9H2P9 285 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 AZI2Q9H6S1 392 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 IRAK4Q9NWZ3 460 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 PCDHB8Q9UN66 801 aa5.41□□□□□ -1.54
LMO3-229ENST00000543721 AGAP1Q9UPQ3 857 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms