RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 DCLK2Q8N568 766 aa10.84□□□□□ -0.67
C2CD3-219ENST00000542930 MRPL43Q8N983 215 aaKnown RBP10.84□□□□□ -0.67
C2CD3-219ENST00000542930 SEPT1Q8WYJ6 367 aa10.84□□□□□ -0.67
C2CD3-219ENST00000542930 GLG1Q92896 1179 aa10.84□□□□□ -0.67
C2CD3-219ENST00000542930 ACSF2Q96CM8 615 aaPredicted RBP10.84□□□□□ -0.67
C2CD3-219ENST00000542930 ZBTB10Q96DT7 871 aa10.84□□□□□ -0.67
C2CD3-219ENST00000542930 RGS18Q9NS28 235 aa10.84□□□□□ -0.67
C2CD3-219ENST00000542930 C1orf112Q9NSG2 853 aa10.84□□□□□ -0.67
C2CD3-219ENST00000542930 MAP1BP46821 2468 aaKnown RBP10.84□□□□□ -0.67
C2CD3-219ENST00000542930 GSTTP1A0A1W2PQM5 241 aa10.83□□□□□ -0.68
C2CD3-219ENST00000542930 DENND3A2RUS2 1198 aa10.83□□□□□ -0.68
C2CD3-219ENST00000542930 C2orf71A6NGG8 1288 aa10.83□□□□□ -0.68
C2CD3-219ENST00000542930 C9IYK1 514 aa10.83□□□□□ -0.68
C2CD3-219ENST00000542930 KLRF2D3W0D1 207 aa10.83□□□□□ -0.68
C2CD3-219ENST00000542930 INSRRP14616 1297 aa10.83□□□□□ -0.68
C2CD3-219ENST00000542930 NFX1Q12986 1120 aaKnown RBP10.83□□□□□ -0.68
C2CD3-219ENST00000542930 TMEM266Q2M3C6 531 aa10.83□□□□□ -0.68
C2CD3-219ENST00000542930 MCMDC2Q4G0Z9 681 aa10.83□□□□□ -0.68
C2CD3-219ENST00000542930 RARS2Q5T160 578 aaKnown RBP10.83□□□□□ -0.68
C2CD3-219ENST00000542930 KCNT2Q6UVM3 1135 aa10.83□□□□□ -0.68
C2CD3-219ENST00000542930 STAG2Q8N3U4 1231 aa10.83□□□□□ -0.68
C2CD3-219ENST00000542930 NME8Q8N427 588 aa10.83□□□□□ -0.68
C2CD3-219ENST00000542930 RIN2Q8WYP3 895 aaPredicted RBP10.83□□□□□ -0.68
C2CD3-219ENST00000542930 TNPO1Q92973 898 aaKnown RBP10.83□□□□□ -0.68
C2CD3-219ENST00000542930 ZSCAN10Q96SZ4 725 aaPredicted RBP10.83□□□□□ -0.68
C2CD3-219ENST00000542930 ADAM2Q99965 735 aa10.83□□□□□ -0.68
C2CD3-219ENST00000542930 SMARCAD1Q9H4L7 1026 aa10.83□□□□□ -0.68
C2CD3-219ENST00000542930 DZANK1Q9NVP4 752 aa10.83□□□□□ -0.68
C2CD3-219ENST00000542930 PCDHA2Q9Y5H9 948 aa10.83□□□□□ -0.68
C2CD3-219ENST00000542930 USP24Q9UPU5 2620 aa10.83□□□□□ -0.68
C2CD3-219ENST00000542930 DOCK5Q9H7D0 1870 aa10.83□□□□□ -0.68
C2CD3-219ENST00000542930 STK25O00506 426 aa10.82□□□□□ -0.68
C2CD3-219ENST00000542930 CLASP2O75122 1294 aaKnown RBP10.82□□□□□ -0.68
C2CD3-219ENST00000542930 FGFR1P11362 822 aa10.82□□□□□ -0.68
C2CD3-219ENST00000542930 KRT76Q01546 638 aa10.82□□□□□ -0.68
C2CD3-219ENST00000542930 TBC1D8BQ0IIM8 1120 aa10.82□□□□□ -0.68
C2CD3-219ENST00000542930 ODR4Q5SWX8 454 aa10.82□□□□□ -0.68
C2CD3-219ENST00000542930 KIAA0319Q5VV43 1072 aa10.82□□□□□ -0.68
C2CD3-219ENST00000542930 PCNX4Q63HM2 1172 aa10.82□□□□□ -0.68
C2CD3-219ENST00000542930 XRRA1Q6P2D8 792 aa10.82□□□□□ -0.68
C2CD3-219ENST00000542930 OTOP3Q7RTS5 596 aa10.82□□□□□ -0.68
C2CD3-219ENST00000542930 NLRX1Q86UT6 975 aa10.82□□□□□ -0.68
C2CD3-219ENST00000542930 C12orf76Q8N812 135 aaPredicted RBP10.82□□□□□ -0.68
C2CD3-219ENST00000542930 ENAHQ8N8S7 591 aaPredicted RBP10.82□□□□□ -0.68
C2CD3-219ENST00000542930 OTUD7AQ8TE49 926 aaPredicted RBP10.82□□□□□ -0.68
C2CD3-219ENST00000542930 EVI5LQ96CN4 794 aa10.82□□□□□ -0.68
C2CD3-219ENST00000542930 FAM227BQ96M60 508 aa10.82□□□□□ -0.68
C2CD3-219ENST00000542930 ZNF558Q96NG5 402 aa10.82□□□□□ -0.68
C2CD3-219ENST00000542930 ELAC1Q9H777 363 aaKnown RBP10.82□□□□□ -0.68
C2CD3-219ENST00000542930 KCNK12Q9HB15 430 aa10.82□□□□□ -0.68
C2CD3-219ENST00000542930 ATP6V0A4Q9HBG4 840 aa10.82□□□□□ -0.68
C2CD3-219ENST00000542930 TMEM161AQ9NX61 479 aa10.82□□□□□ -0.68
C2CD3-219ENST00000542930 SPG21Q9NZD8 308 aa10.82□□□□□ -0.68
C2CD3-219ENST00000542930 WNT16Q9UBV4 365 aa10.82□□□□□ -0.68
C2CD3-219ENST00000542930 ATRXP46100 2492 aa10.82□□□□□ -0.68
C2CD3-219ENST00000542930 GPR179Q6PRD1 2367 aa10.81□□□□□ -0.68
C2CD3-219ENST00000542930 A0A0D9SFI3 127 aa10.81□□□□□ -0.68
C2CD3-219ENST00000542930 SMIM35A0A1B0GVV1 85 aa10.81□□□□□ -0.68
C2CD3-219ENST00000542930 ZNF213O14771 459 aa10.81□□□□□ -0.68
C2CD3-219ENST00000542930 ATP9AO75110 1047 aa10.81□□□□□ -0.68
C2CD3-219ENST00000542930 RPS6KA5O75582 802 aa10.81□□□□□ -0.68
C2CD3-219ENST00000542930 SP9P0CG40 484 aa10.81□□□□□ -0.68
C2CD3-219ENST00000542930 KCNA2P16389 499 aa10.81□□□□□ -0.68
C2CD3-219ENST00000542930 MX1P20591 662 aa10.81□□□□□ -0.68
C2CD3-219ENST00000542930 ATXN1P54253 815 aaKnown RBP10.81□□□□□ -0.68
C2CD3-219ENST00000542930 FAM189BP81408 668 aa10.81□□□□□ -0.68
C2CD3-219ENST00000542930 BMS1Q14692 1282 aaKnown RBP10.81□□□□□ -0.68
C2CD3-219ENST00000542930 KANK3Q6NY19 840 aa10.81□□□□□ -0.68
C2CD3-219ENST00000542930 LRRC55Q6ZSA7 311 aa10.81□□□□□ -0.68
C2CD3-219ENST00000542930 HOMER1Q86YM7 354 aa10.81□□□□□ -0.68
C2CD3-219ENST00000542930 GPR161Q8N6U8 529 aaKnown RBP10.81□□□□□ -0.68
C2CD3-219ENST00000542930 SUMF1Q8NBK3 374 aa10.81□□□□□ -0.68
C2CD3-219ENST00000542930 GPRASP2Q96D09 838 aa10.81□□□□□ -0.68
C2CD3-219ENST00000542930 BORCS6Q96GS4 357 aa10.81□□□□□ -0.68
C2CD3-219ENST00000542930 CDHR1Q96JP9 859 aa10.81□□□□□ -0.68
C2CD3-219ENST00000542930 TMEM117Q9H0C3 514 aa10.81□□□□□ -0.68
C2CD3-219ENST00000542930 IGSF9Q9P2J2 1179 aa10.81□□□□□ -0.68
C2CD3-219ENST00000542930 MAD2L2Q9UI95 211 aa10.81□□□□□ -0.68
C2CD3-219ENST00000542930 NOC2LQ9Y3T9 749 aaKnown RBP10.81□□□□□ -0.68
C2CD3-219ENST00000542930 KRBA1A5PL33 1030 aa10.8□□□□□ -0.68
C2CD3-219ENST00000542930 PALM3A6NDB9 673 aaPredicted RBP10.8□□□□□ -0.68
C2CD3-219ENST00000542930 GPR182O15218 404 aa10.8□□□□□ -0.68
C2CD3-219ENST00000542930 HOXA2O43364 376 aa10.8□□□□□ -0.68
C2CD3-219ENST00000542930 RFX1P22670 979 aa10.8□□□□□ -0.68
C2CD3-219ENST00000542930 PBX3P40426 434 aa10.8□□□□□ -0.68
C2CD3-219ENST00000542930 CCDC149Q6ZUS6 474 aa10.8□□□□□ -0.68
C2CD3-219ENST00000542930 ZNF589Q86UQ0 364 aaPredicted RBP10.8□□□□□ -0.68
C2CD3-219ENST00000542930 TICAM2Q86XR7 235 aa10.8□□□□□ -0.68
C2CD3-219ENST00000542930 C1orf210Q8IVY1 113 aa10.8□□□□□ -0.68
C2CD3-219ENST00000542930 LRRC43Q8N309 656 aa10.8□□□□□ -0.68
C2CD3-219ENST00000542930 CASD1Q96PB1 797 aa10.8□□□□□ -0.68
C2CD3-219ENST00000542930 PIGSQ96S52 555 aa10.8□□□□□ -0.68
C2CD3-219ENST00000542930 ZSWIM5Q9P217 1185 aa10.8□□□□□ -0.68
C2CD3-219ENST00000542930 ST3GAL5Q9UNP4 418 aa10.8□□□□□ -0.68
C2CD3-219ENST00000542930 LOXHD1Q8IVV2 1947 aa10.8□□□□□ -0.68
C2CD3-219ENST00000542930 FANCMQ8IYD8 2048 aa10.79□□□□□ -0.68
C2CD3-219ENST00000542930 PNMA6FA0A0J9YX94 578 aa10.79□□□□□ -0.68
C2CD3-219ENST00000542930 PRR5-ARHGAP8B1AHC4 643 aa10.79□□□□□ -0.68
C2CD3-219ENST00000542930 B4E1Z4 1266 aa10.79□□□□□ -0.68
C2CD3-219ENST00000542930 NARSO43776 548 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms