RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 DRD4P21917 467 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 ECHS1P30084 290 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 GCKP35557 465 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 PEX19P40855 299 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 IFNAR2P48551 515 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 MRPL12P52815 198 aaKnown RBP5.78□□□□□ -1.48
KDM3B-209ENST00000542866 XRCC4Q13426 336 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 DLGAP5Q15398 846 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 AGBL2Q5U5Z8 902 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 CIAPIN1Q6FI81 312 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 PEX26Q7Z412 305 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 GUF1Q8N442 669 aaKnown RBP5.78□□□□□ -1.48
KDM3B-209ENST00000542866 C1orf131Q8NDD1 294 aaKnown RBP5.78□□□□□ -1.48
KDM3B-209ENST00000542866 CCDC26Q8TAB7 109 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 TBCKQ8TEA7 893 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 CCT6BQ92526 530 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 DDX12PQ92771 950 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 CUL5Q93034 780 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 XPO6Q96QU8 1125 aaKnown RBP5.78□□□□□ -1.48
KDM3B-209ENST00000542866 TRIM51Q9BSJ1 452 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 NUCKS1Q9H1E3 243 aaKnown RBP5.78□□□□□ -1.48
KDM3B-209ENST00000542866 ATP6V0A4Q9HBG4 840 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 DCP1AQ9NPI6 582 aaPredicted RBP5.78□□□□□ -1.48
KDM3B-209ENST00000542866 SH3GLB2Q9NR46 395 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 RNF181Q9P0P0 153 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 SAMD15Q9P1V8 674 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 UTP11Q9Y3A2 253 aaKnown RBP5.78□□□□□ -1.48
KDM3B-209ENST00000542866 PCDHGC5Q9Y5F6 944 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 POTEMA6NI47 508 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 CAND2O75155 1236 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 HLA-DOAP06340 250 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 MMEP08473 750 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 ACTN1P12814 892 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 CHN1P15882 459 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 PRPHP41219 470 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 GNAQP50148 359 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 FKBP3Q00688 224 aaKnown RBP5.78□□□□□ -1.48
KDM3B-209ENST00000542866 CACNB1Q02641 598 aaPredicted RBP5.78□□□□□ -1.48
KDM3B-209ENST00000542866 LRRC63Q05C16 580 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 PICALMQ13492 652 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 RCSD1Q6JBY9 416 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 ARMC9Q7Z3E5 817 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 NEK8Q86SG6 692 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 MYOCDQ8IZQ8 938 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 METTL13Q8N6R0 699 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 C3orf20Q8ND61 904 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 SNX29Q8TEQ0 813 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 FAXDC2Q96IV6 333 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 PBKQ96KB5 322 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 MMTAG2Q9BU76 263 aaKnown RBP5.78□□□□□ -1.48
KDM3B-209ENST00000542866 EIF4E1BA6NMX2 242 aaKnown RBP5.78□□□□□ -1.48
KDM3B-209ENST00000542866 STXBP3O00186 592 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 CYTH3O43739 400 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 MGRN1O60291 552 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 NOL4O94818 638 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 TSPY3P0CV98 308 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 TSPY8P0CW00 308 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 PCP11498 1178 aaKnown RBP5.78□□□□□ -1.48
KDM3B-209ENST00000542866 SCNN1DP51172 638 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 GRB10Q13322 594 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 LACTB2Q53H82 288 aaPredicted RBP5.78□□□□□ -1.48
KDM3B-209ENST00000542866 LRRC55Q6ZSA7 311 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 KRT25Q7Z3Z0 450 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.78□□□□□ -1.487e-8■■■□□ 16.4
KDM3B-209ENST00000542866 KDM4CQ9H3R0 1056 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 C6orf50Q9HD87 102 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 BLOC1S4Q9NUP1 217 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 TMEM260Q9NX78 707 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 BARHL2Q9NY43 387 aa5.78□□□□□ -1.48
KDM3B-209ENST00000542866 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.78□□□□□ -1.48
KDM3B-209ENST00000542866 NUP188Q5SRE5 1749 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 CHD4Q14839 1912 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 PVALEFA0A1B0GWK0 134 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 KLRF2D3W0D1 207 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 F8VZ95 297 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 RBAK-RBAKDNI3L0D1 243 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 PPP1R12AO14974 1030 aaPredicted RBP5.77□□□□□ -1.49
KDM3B-209ENST00000542866 DNAJC8O75937 253 aaPredicted RBP5.77□□□□□ -1.49
KDM3B-209ENST00000542866 ANP32DO95626 131 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 COPB2P35606 906 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 SLCO1A2P46721 670 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 USP11P51784 963 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 PTK2Q05397 1052 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 CALCRLQ16602 461 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 IFI16Q16666 785 aaKnown RBP5.77□□□□□ -1.49
KDM3B-209ENST00000542866 TMEM266Q2M3C6 531 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 KRT79Q5XKE5 535 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 ARMCX6Q7L4S7 300 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 TMC3Q7Z5M5 1100 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 LRRC34Q8IZ02 419 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 ZNF444Q8N0Y2 327 aaPredicted RBP5.77□□□□□ -1.49
KDM3B-209ENST00000542866 MICAL1Q8TDZ2 1067 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 SCFD2Q8WU76 684 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.77□□□□□ -1.493e-6■■■■□ 21.4
KDM3B-209ENST00000542866 SPDL1Q96EA4 605 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 NUDT12Q9BQG2 462 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 SYT17Q9BSW7 474 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 EDEM3Q9BZQ6 932 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 ZNRF3Q9ULT6 936 aa5.77□□□□□ -1.49
KDM3B-209ENST00000542866 STK38LQ9Y2H1 464 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms