RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 TBC1D22BQ9NU19 505 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 ZNF446Q9NWS9 450 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 PKD2L1Q9P0L9 805 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 ZNF112Q9UJU3 913 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 SAR1BQ9Y6B6 198 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 KIAA1217Q5T5P2 1943 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 ZMYM2Q9UBW7 1377 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 MACROD2A1Z1Q3 448 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 CLIC2O15247 247 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 DHX15O43143 795 aaKnown RBP11.89□□□□□ -0.51
NECAP1-206ENST00000542095 TGFB1I1O43294 461 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 PPP1R12BO60237 982 aaPredicted RBP11.89□□□□□ -0.51
NECAP1-206ENST00000542095 TACC1O75410 805 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 ATP1A1P05023 1023 aaKnown RBP11.89□□□□□ -0.51
NECAP1-206ENST00000542095 EIF2AK2P19525 551 aaKnown RBP11.89□□□□□ -0.51
NECAP1-206ENST00000542095 MAGEA1P43355 309 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 KCNA1Q09470 495 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 PGM5Q15124 567 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 DCAF17Q5H9S7 520 aaPredicted RBP11.89□□□□□ -0.51
NECAP1-206ENST00000542095 ODR4Q5SWX8 454 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 RNF207Q6ZRF8 634 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 ZNF720Q7Z2F6 126 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 ZNF280CQ8ND82 737 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 TRIM58Q8NG06 486 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 TAAR1Q96RJ0 339 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 PARD6BQ9BYG5 372 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 LUC7LQ9NQ29 371 aaKnown RBP11.89□□□□□ -0.51
NECAP1-206ENST00000542095 PCDHB13Q9Y5F0 798 aa11.89□□□□□ -0.51
NECAP1-206ENST00000542095 RBAK-RBAKDNI3L0D1 243 aa11.88□□□□□ -0.51
NECAP1-206ENST00000542095 TULP1O00294 542 aaPredicted RBP11.88□□□□□ -0.51
NECAP1-206ENST00000542095 VWA5AO00534 786 aa11.88□□□□□ -0.51
NECAP1-206ENST00000542095 ENC1O14682 589 aa11.88□□□□□ -0.51
NECAP1-206ENST00000542095 ZSCAN20P17040 1043 aaPredicted RBP11.88□□□□□ -0.51
NECAP1-206ENST00000542095 PSMC2P35998 433 aaKnown RBP11.88□□□□□ -0.51
NECAP1-206ENST00000542095 RAPGEF1Q13905 1077 aa11.88□□□□□ -0.51
NECAP1-206ENST00000542095 EXOC3L4Q17RC7 722 aa11.88□□□□□ -0.51
NECAP1-206ENST00000542095 ZC2HC1CQ53FD0 456 aaPredicted RBP11.88□□□□□ -0.51
NECAP1-206ENST00000542095 TCERG1LQ5VWI1 586 aa11.88□□□□□ -0.51
NECAP1-206ENST00000542095 HS2ST1Q7LGA3 356 aa11.88□□□□□ -0.51
NECAP1-206ENST00000542095 WRNIP1Q96S55 665 aa11.88□□□□□ -0.51
NECAP1-206ENST00000542095 FIZ1Q96SL8 496 aa11.88□□□□□ -0.51
NECAP1-206ENST00000542095 MKNK1Q9BUB5 465 aa11.88□□□□□ -0.51
NECAP1-206ENST00000542095 EPC1Q9H2F5 836 aa11.88□□□□□ -0.51
NECAP1-206ENST00000542095 AIPL1Q9NZN9 384 aa11.88□□□□□ -0.51
NECAP1-206ENST00000542095 DBR1Q9UK59 544 aaKnown RBP11.88□□□□□ -0.51
NECAP1-206ENST00000542095 SAMM50Q9Y512 469 aa11.88□□□□□ -0.51
NECAP1-206ENST00000542095 DUSP10Q9Y6W6 482 aa11.88□□□□□ -0.51
NECAP1-206ENST00000542095 ZNF541Q9H0D2 1346 aa11.88□□□□□ -0.51
NECAP1-206ENST00000542095 PJA2O43164 708 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 HIP1RO75146 1068 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 MYCLP12524 364 aaPredicted RBP11.87□□□□□ -0.51
NECAP1-206ENST00000542095 PTPRAP18433 802 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 CASP4P49662 377 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 GFPT1Q06210 699 aaPredicted RBP11.87□□□□□ -0.51
NECAP1-206ENST00000542095 ITGB3BPQ13352 177 aaPredicted RBP11.87□□□□□ -0.51
NECAP1-206ENST00000542095 ASIC2Q16515 512 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 ANGEL2Q5VTE6 544 aaKnown RBP11.87□□□□□ -0.51
NECAP1-206ENST00000542095 PADI6Q6TGC4 694 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 GBP6Q6ZN66 633 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 GOLGA5Q8TBA6 731 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 ATG4CQ96DT6 458 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 RMDN3Q96TC7 470 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 PXMP2Q9NR77 195 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 TLR2O60603 784 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 QARSP47897 775 aaKnown RBP11.87□□□□□ -0.51
NECAP1-206ENST00000542095 CKAP4Q07065 602 aaKnown RBP11.87□□□□□ -0.51
NECAP1-206ENST00000542095 ARHGEF16Q5VV41 709 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 NSMFQ6X4W1 530 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 GPIHBP1Q8IV16 184 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 FAM186BQ8IYM0 893 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 KRT222Q8N1A0 295 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 ZKSCAN4Q969J2 545 aaPredicted RBP11.87□□□□□ -0.51
NECAP1-206ENST00000542095 SLC35C1Q96A29 364 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 ALS2CR12Q96Q35 445 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 SGIP1Q9BQI5 828 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 PDCD2LQ9BRP1 358 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 GBP3Q9H0R5 595 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 RNF146Q9NTX7 359 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 HDAC6Q9UBN7 1215 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 TCEAL9Q9UHQ7 104 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 JRKLQ9Y4A0 524 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 ZHX2Q9Y6X8 837 aa11.87□□□□□ -0.51
NECAP1-206ENST00000542095 POLR2AP24928 1970 aaKnown RBP11.87□□□□□ -0.51
NECAP1-206ENST00000542095 GTPBP10A4D1E9 387 aaKnown RBP11.86□□□□□ -0.51
NECAP1-206ENST00000542095 C19orf81C9J6K1 198 aa11.86□□□□□ -0.51
NECAP1-206ENST00000542095 ATP8B1O43520 1251 aa11.86□□□□□ -0.51
NECAP1-206ENST00000542095 ZRANB2O95218 330 aaKnown RBP eCLIP11.86□□□□□ -0.51
NECAP1-206ENST00000542095 LYPLA2O95372 231 aa11.86□□□□□ -0.51
NECAP1-206ENST00000542095 SLC9A1P19634 815 aa11.86□□□□□ -0.51
NECAP1-206ENST00000542095 PON1P27169 355 aa11.86□□□□□ -0.51
NECAP1-206ENST00000542095 OAZ1P54368 228 aa11.86□□□□□ -0.51
NECAP1-206ENST00000542095 APBA1Q02410 837 aa11.86□□□□□ -0.51
NECAP1-206ENST00000542095 KLHL30Q0D2K2 578 aa11.86□□□□□ -0.51
NECAP1-206ENST00000542095 ALCAMQ13740 583 aa11.86□□□□□ -0.51
NECAP1-206ENST00000542095 BRD3Q15059 726 aa11.86□□□□□ -0.51
NECAP1-206ENST00000542095 KLHDC7AQ5VTJ3 777 aa11.86□□□□□ -0.51
NECAP1-206ENST00000542095 XRRA1Q6P2D8 792 aa11.86□□□□□ -0.51
NECAP1-206ENST00000542095 MSANTD4Q8NCY6 345 aa11.86□□□□□ -0.51
NECAP1-206ENST00000542095 C12orf42Q96LP6 360 aa11.86□□□□□ -0.51
NECAP1-206ENST00000542095 CCDC43Q96MW1 224 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms