RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 SH2D3AQ9BRG2 576 aa16.71■□□□□ 0.26
CNOT9-208ENST00000542068 RGL1Q9NZL6 768 aa16.71■□□□□ 0.26
CNOT9-208ENST00000542068 AJAP1Q9UKB5 411 aaPredicted RBP16.71■□□□□ 0.26
CNOT9-208ENST00000542068 A0A1B0GUL6 1792 aa16.7■□□□□ 0.26
CNOT9-208ENST00000542068 F5H6K3 240 aa16.7■□□□□ 0.26
CNOT9-208ENST00000542068 KLRC3Q07444 240 aa16.7■□□□□ 0.26
CNOT9-208ENST00000542068 EXOC3L4Q17RC7 722 aa16.7■□□□□ 0.26
CNOT9-208ENST00000542068 CCDC91Q7Z6B0 441 aa16.7■□□□□ 0.26
CNOT9-208ENST00000542068 KSR1Q8IVT5 923 aa16.7■□□□□ 0.26
CNOT9-208ENST00000542068 SUGP1Q8IWZ8 645 aaKnown RBP16.7■□□□□ 0.26
CNOT9-208ENST00000542068 TMBIM4Q9HC24 238 aa16.7■□□□□ 0.26
CNOT9-208ENST00000542068 OSGEPQ9NPF4 335 aa16.7■□□□□ 0.26
CNOT9-208ENST00000542068 ARMCX3Q9UH62 379 aaPredicted RBP16.7■□□□□ 0.26
CNOT9-208ENST00000542068 NR2E1Q9Y466 385 aa16.7■□□□□ 0.26
CNOT9-208ENST00000542068 PHLPP1O60346 1717 aa16.7■□□□□ 0.26
CNOT9-208ENST00000542068 RSPH10B2B2RC85 870 aa16.7■□□□□ 0.26
CNOT9-208ENST00000542068 HMGB1P1B2RPK0 211 aaPredicted RBP16.7■□□□□ 0.26
CNOT9-208ENST00000542068 HGSO14964 777 aaPredicted RBP16.7■□□□□ 0.26
CNOT9-208ENST00000542068 ECM2O94769 699 aaPredicted RBP16.7■□□□□ 0.26
CNOT9-208ENST00000542068 GCNT3O95395 438 aa16.7■□□□□ 0.26
CNOT9-208ENST00000542068 RSPH10BP0C881 870 aa16.7■□□□□ 0.26
CNOT9-208ENST00000542068 UCHL3P15374 230 aa16.7■□□□□ 0.26
CNOT9-208ENST00000542068 KCNA1Q09470 495 aa16.7■□□□□ 0.26
CNOT9-208ENST00000542068 GPATCH4Q5T3I0 446 aaKnown RBP16.7■□□□□ 0.26
CNOT9-208ENST00000542068 MYCBPQ99417 103 aaPredicted RBP16.7■□□□□ 0.26
CNOT9-208ENST00000542068 NCAPGQ9BPX3 1015 aa16.7■□□□□ 0.26
CNOT9-208ENST00000542068 BHMT2Q9H2M3 363 aa16.7■□□□□ 0.26
CNOT9-208ENST00000542068 HAUS2Q9NVX0 235 aa16.7■□□□□ 0.26
CNOT9-208ENST00000542068 PCDHGC5Q9Y5F6 944 aa16.7■□□□□ 0.26
CNOT9-208ENST00000542068 PGRMC1O00264 195 aaKnown RBP16.69■□□□□ 0.26
CNOT9-208ENST00000542068 MYBP10242 640 aa16.69■□□□□ 0.26
CNOT9-208ENST00000542068 AOC3Q16853 763 aa16.69■□□□□ 0.26
CNOT9-208ENST00000542068 CRY2Q49AN0 593 aa16.69■□□□□ 0.26
CNOT9-208ENST00000542068 MIGA2Q7L4E1 593 aa16.69■□□□□ 0.26
CNOT9-208ENST00000542068 RNF14Q9UBS8 474 aa16.69■□□□□ 0.26
CNOT9-208ENST00000542068 FGGP02679 453 aa16.69■□□□□ 0.26
CNOT9-208ENST00000542068 FNTAP49354 379 aa16.69■□□□□ 0.26
CNOT9-208ENST00000542068 CTTNQ14247 550 aaKnown RBP16.69■□□□□ 0.26
CNOT9-208ENST00000542068 ZCWPW2Q504Y3 356 aa16.69■□□□□ 0.26
CNOT9-208ENST00000542068 APOBEC3HQ6NTF7 200 aaKnown RBP16.69■□□□□ 0.26
CNOT9-208ENST00000542068 SFR1Q86XK3 245 aa16.69■□□□□ 0.26
CNOT9-208ENST00000542068 SP8Q8IXZ3 490 aa16.69■□□□□ 0.26
CNOT9-208ENST00000542068 NAGPAQ9UK23 515 aa16.69■□□□□ 0.26
CNOT9-208ENST00000542068 GMNCA6NCL1 334 aa16.69■□□□□ 0.26
CNOT9-208ENST00000542068 MED24O75448 989 aa16.69■□□□□ 0.26
CNOT9-208ENST00000542068 ABCB5Q2M3G0 1257 aa16.69■□□□□ 0.26
CNOT9-208ENST00000542068 CNPY4Q8N129 248 aa16.69■□□□□ 0.26
CNOT9-208ENST00000542068 PRPF38AQ8NAV1 312 aaKnown RBP16.69■□□□□ 0.26
CNOT9-208ENST00000542068 RBM46Q8TBY0 533 aaKnown RBP16.69■□□□□ 0.26
CNOT9-208ENST00000542068 CSRNP1Q96S65 589 aa16.69■□□□□ 0.26
CNOT9-208ENST00000542068 ISCUQ9H1K1 167 aa16.69■□□□□ 0.26
CNOT9-208ENST00000542068 DDX20Q9UHI6 824 aaKnown RBP16.69■□□□□ 0.26
CNOT9-208ENST00000542068 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.69■□□□□ 0.26
CNOT9-208ENST00000542068 FAM107AO95990 144 aa16.68■□□□□ 0.26
CNOT9-208ENST00000542068 SLCO1A2P46721 670 aa16.68■□□□□ 0.26
CNOT9-208ENST00000542068 ARHGAP4P98171 946 aa16.68■□□□□ 0.26
CNOT9-208ENST00000542068 TMEM119Q4V9L6 283 aa16.68■□□□□ 0.26
CNOT9-208ENST00000542068 KRT27Q7Z3Y8 459 aa16.68■□□□□ 0.26
CNOT9-208ENST00000542068 PROM2Q8N271 834 aa16.68■□□□□ 0.26
CNOT9-208ENST00000542068 GLG1Q92896 1179 aa16.68■□□□□ 0.26
CNOT9-208ENST00000542068 LRRC27Q9C0I9 530 aa16.68■□□□□ 0.26
CNOT9-208ENST00000542068 GANQ9H2C0 597 aa16.68■□□□□ 0.26
CNOT9-208ENST00000542068 TRPC5Q9UL62 973 aaPredicted RBP16.68■□□□□ 0.26
CNOT9-208ENST00000542068 FRMD3A2A2Y4 597 aa16.68■□□□□ 0.26
CNOT9-208ENST00000542068 TBCAO75347 108 aaKnown RBP16.68■□□□□ 0.26
CNOT9-208ENST00000542068 CYP11B2P19099 503 aa16.68■□□□□ 0.26
CNOT9-208ENST00000542068 TNFRSF8P28908 595 aa16.68■□□□□ 0.26
CNOT9-208ENST00000542068 HSPA9P38646 679 aaKnown RBP16.68■□□□□ 0.26
CNOT9-208ENST00000542068 PSMD2Q13200 908 aa16.68■□□□□ 0.26
CNOT9-208ENST00000542068 AADACL2Q6P093 401 aa16.68■□□□□ 0.26
CNOT9-208ENST00000542068 FBXO11Q86XK2 927 aa16.68■□□□□ 0.26
CNOT9-208ENST00000542068 NUCKS1Q9H1E3 243 aaKnown RBP16.68■□□□□ 0.26
CNOT9-208ENST00000542068 KLC4Q9NSK0 619 aa16.68■□□□□ 0.26
CNOT9-208ENST00000542068 GGT7Q9UJ14 662 aa16.68■□□□□ 0.26
CNOT9-208ENST00000542068 DNM3Q9UQ16 869 aa16.68■□□□□ 0.26
CNOT9-208ENST00000542068 RBAK-RBAKDNI3L0D1 243 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 XRCC5P13010 732 aaKnown RBP16.67■□□□□ 0.26
CNOT9-208ENST00000542068 KRT13P13646 458 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 HSPA1LP34931 641 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 USP11P51784 963 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 ARHGAP44Q17R89 818 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 NBPF9Q3BBW0 867 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 GLYCTKQ8IVS8 523 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 LRRC45Q96CN5 670 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 SLC40A1Q9NP59 571 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 GAKO14976 1311 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 ZBTB39O15060 712 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 RAD17O75943 681 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 H2AFZP0C0S5 128 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 IFNAR2P48551 515 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 SEMA3FQ13275 785 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 PDIA5Q14554 519 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 H2AFVQ71UI9 128 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 IRF2BP2Q7Z5L9 587 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 COL23A1Q86Y22 540 aaPredicted RBP16.67■□□□□ 0.26
CNOT9-208ENST00000542068 RAPGEF5Q92565 580 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 RUBCNQ92622 972 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 GCNT4Q9P109 453 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 PNMA2Q9UL42 364 aa16.67■□□□□ 0.26
CNOT9-208ENST00000542068 ROBO3Q96MS0 1386 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms