RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 KIAA0319LQ8IZA0 1049 aa17.64■□□□□ 0.41
CLSTN3-213ENST00000541953 CRYGNQ8WXF5 182 aa17.64■□□□□ 0.41
CLSTN3-213ENST00000541953 FTHL17Q9BXU8 183 aa17.64■□□□□ 0.41
CLSTN3-213ENST00000541953 MYO15AQ9UKN7 3530 aa17.64■□□□□ 0.41
CLSTN3-213ENST00000541953 SMCO2A6NFE2 343 aa17.63■□□□□ 0.41
CLSTN3-213ENST00000541953 CPA1P15085 419 aa17.63■□□□□ 0.41
CLSTN3-213ENST00000541953 KLRC1P26715 233 aa17.63■□□□□ 0.41
CLSTN3-213ENST00000541953 NDUFV1P49821 464 aa17.63■□□□□ 0.41
CLSTN3-213ENST00000541953 NFX1Q12986 1120 aaKnown RBP17.63■□□□□ 0.41
CLSTN3-213ENST00000541953 CSPP1Q1MSJ5 1256 aa17.63■□□□□ 0.41
CLSTN3-213ENST00000541953 JAKMIP3Q5VZ66 844 aa17.63■□□□□ 0.41
CLSTN3-213ENST00000541953 PPP1R18Q6NYC8 613 aa17.63■□□□□ 0.41
CLSTN3-213ENST00000541953 FBXL18Q96ME1 805 aa17.63■□□□□ 0.41
CLSTN3-213ENST00000541953 BARHL2Q9NY43 387 aa17.63■□□□□ 0.41
CLSTN3-213ENST00000541953 FAM50BQ9Y247 325 aa17.63■□□□□ 0.41
CLSTN3-213ENST00000541953 M0QZ92 97 aa17.62■□□□□ 0.41
CLSTN3-213ENST00000541953 ZBTB43O43298 467 aa17.62■□□□□ 0.41
CLSTN3-213ENST00000541953 NCK2O43639 380 aa17.62■□□□□ 0.41
CLSTN3-213ENST00000541953 EYA4O95677 639 aa17.62■□□□□ 0.41
CLSTN3-213ENST00000541953 FAM228AQ86W67 206 aa17.62■□□□□ 0.41
CLSTN3-213ENST00000541953 EFHBQ8N7U6 833 aa17.62■□□□□ 0.41
CLSTN3-213ENST00000541953 SMRP1Q8NCR6 262 aa17.62■□□□□ 0.41
CLSTN3-213ENST00000541953 ATP8B4Q8TF62 1192 aa17.62■□□□□ 0.41
CLSTN3-213ENST00000541953 NEK1Q96PY6 1258 aa17.62■□□□□ 0.41
CLSTN3-213ENST00000541953 DMDP11532 3685 aa17.62■□□□□ 0.41
CLSTN3-213ENST00000541953 KLF18A0A0U1RQI7 1052 aa17.61■□□□□ 0.41
CLSTN3-213ENST00000541953 GOLGA8AA7E2F4 631 aa17.61■□□□□ 0.41
CLSTN3-213ENST00000541953 GOLGA8BA8MQT2 603 aa17.61■□□□□ 0.41
CLSTN3-213ENST00000541953 C9IYK1 514 aa17.61■□□□□ 0.41
CLSTN3-213ENST00000541953 BACH1O14867 736 aa17.61■□□□□ 0.41
CLSTN3-213ENST00000541953 PER2O15055 1255 aa17.61■□□□□ 0.41
CLSTN3-213ENST00000541953 C22orf31O95567 290 aa17.61■□□□□ 0.41
CLSTN3-213ENST00000541953 SARSP49591 514 aaKnown RBP17.61■□□□□ 0.41
CLSTN3-213ENST00000541953 NHLH1Q02575 133 aa17.61■□□□□ 0.41
CLSTN3-213ENST00000541953 KIZQ2M2Z5 673 aa17.61■□□□□ 0.41
CLSTN3-213ENST00000541953 HERC4Q5GLZ8 1057 aaPredicted RBP17.61■□□□□ 0.41
CLSTN3-213ENST00000541953 TRMT1LQ7Z2T5 733 aaKnown RBP17.61■□□□□ 0.41
CLSTN3-213ENST00000541953 PLA2G4DQ86XP0 818 aa17.61■□□□□ 0.41
CLSTN3-213ENST00000541953 OSMRQ99650 979 aa17.61■□□□□ 0.41
CLSTN3-213ENST00000541953 ADAM2Q99965 735 aa17.61■□□□□ 0.41
CLSTN3-213ENST00000541953 RNF19AQ9NV58 838 aa17.61■□□□□ 0.41
CLSTN3-213ENST00000541953 RBM28Q9NW13 759 aaKnown RBP17.61■□□□□ 0.41
CLSTN3-213ENST00000541953 ST3GAL5Q9UNP4 418 aa17.61■□□□□ 0.41
CLSTN3-213ENST00000541953 MYH9P35579 1960 aaKnown RBP17.6■□□□□ 0.41
CLSTN3-213ENST00000541953 TBKBP1A7MCY6 615 aa17.6■□□□□ 0.41
CLSTN3-213ENST00000541953 EDIL3O43854 480 aa17.6■□□□□ 0.41
CLSTN3-213ENST00000541953 RPS6KA5O75582 802 aa17.6■□□□□ 0.41
CLSTN3-213ENST00000541953 FOSP01100 380 aaPredicted RBP17.6■□□□□ 0.41
CLSTN3-213ENST00000541953 VTNP04004 478 aa17.6■□□□□ 0.41
CLSTN3-213ENST00000541953 STAG3L1P0CL83 205 aa17.6■□□□□ 0.41
CLSTN3-213ENST00000541953 FGFR1P11362 822 aa17.6■□□□□ 0.41
CLSTN3-213ENST00000541953 ADD1P35611 737 aaKnown RBP17.6■□□□□ 0.41
CLSTN3-213ENST00000541953 ERVFC1P60507 584 aa17.6■□□□□ 0.41
CLSTN3-213ENST00000541953 APOBRQ0VD83 1088 aa17.6■□□□□ 0.41
CLSTN3-213ENST00000541953 AP3B2Q13367 1082 aa17.6■□□□□ 0.41
CLSTN3-213ENST00000541953 SWSAP1Q6NVH7 229 aa17.6■□□□□ 0.41
CLSTN3-213ENST00000541953 PDXDC2PQ6P474 469 aa17.6■□□□□ 0.41
CLSTN3-213ENST00000541953 RASGRP4Q8TDF6 673 aa17.6■□□□□ 0.41
CLSTN3-213ENST00000541953 ZNF302Q9NR11 478 aa17.6■□□□□ 0.41
CLSTN3-213ENST00000541953 LRFN2Q9ULH4 789 aa17.6■□□□□ 0.41
CLSTN3-213ENST00000541953 USP15Q9Y4E8 981 aaPredicted RBP17.6■□□□□ 0.41
CLSTN3-213ENST00000541953 KMT2EQ8IZD2 1858 aa17.6■□□□□ 0.41
CLSTN3-213ENST00000541953 HBP1O60381 514 aa17.59■□□□□ 0.41
CLSTN3-213ENST00000541953 GPR32O75388 356 aa17.59■□□□□ 0.41
CLSTN3-213ENST00000541953 RPLP2P05387 115 aaKnown RBP17.59■□□□□ 0.41
CLSTN3-213ENST00000541953 PBX3P40426 434 aa17.59■□□□□ 0.41
CLSTN3-213ENST00000541953 CLCN3P51790 818 aa17.59■□□□□ 0.41
CLSTN3-213ENST00000541953 DSC3Q14574 896 aa17.59■□□□□ 0.41
CLSTN3-213ENST00000541953 NAALADL2Q58DX5 795 aa17.59■□□□□ 0.41
CLSTN3-213ENST00000541953 SYNE3Q6ZMZ3 975 aa17.59■□□□□ 0.41
CLSTN3-213ENST00000541953 DHX32Q7L7V1 743 aaKnown RBP17.59■□□□□ 0.41
CLSTN3-213ENST00000541953 NME8Q8N427 588 aa17.59■□□□□ 0.41
CLSTN3-213ENST00000541953 ZNF668Q96K58 619 aaPredicted RBP17.59■□□□□ 0.41
CLSTN3-213ENST00000541953 PHOX2BQ99453 314 aa17.59■□□□□ 0.41
CLSTN3-213ENST00000541953 CWH43Q9H720 699 aa17.59■□□□□ 0.41
CLSTN3-213ENST00000541953 RGS18Q9NS28 235 aa17.59■□□□□ 0.41
CLSTN3-213ENST00000541953 CDH22Q9UJ99 828 aa17.59■□□□□ 0.41
CLSTN3-213ENST00000541953 COL1A2P08123 1366 aa17.58■□□□□ 0.4
CLSTN3-213ENST00000541953 LOC730098B7Z3J9 87 aa17.58■□□□□ 0.4
CLSTN3-213ENST00000541953 IPO5O00410 1097 aaKnown RBP17.58■□□□□ 0.4
CLSTN3-213ENST00000541953 ZNF76P36508 570 aa17.58■□□□□ 0.4
CLSTN3-213ENST00000541953 SLC26A2P50443 739 aa17.58■□□□□ 0.4
CLSTN3-213ENST00000541953 COASYQ13057 564 aa17.58■□□□□ 0.4
CLSTN3-213ENST00000541953 PKN1Q16512 942 aa17.58■□□□□ 0.4
CLSTN3-213ENST00000541953 PFKFB3Q16875 520 aaPredicted RBP17.58■□□□□ 0.4
CLSTN3-213ENST00000541953 LRRC55Q6ZSA7 311 aa17.58■□□□□ 0.4
CLSTN3-213ENST00000541953 NIPA1Q7RTP0 329 aa17.58■□□□□ 0.4
CLSTN3-213ENST00000541953 COLGALT1Q8NBJ5 622 aa17.58■□□□□ 0.4
CLSTN3-213ENST00000541953 LENG9Q96B70 501 aa17.58■□□□□ 0.4
CLSTN3-213ENST00000541953 POP1Q99575 1024 aaKnown RBP17.58■□□□□ 0.4
CLSTN3-213ENST00000541953 TYW1Q9NV66 732 aaKnown RBP17.58■□□□□ 0.4
CLSTN3-213ENST00000541953 PCDHB7Q9Y5E2 793 aa17.58■□□□□ 0.4
CLSTN3-213ENST00000541953 DENND3A2RUS2 1198 aa17.57■□□□□ 0.4
CLSTN3-213ENST00000541953 FGF18O76093 207 aa17.57■□□□□ 0.4
CLSTN3-213ENST00000541953 CYP3A4P08684 503 aa17.57■□□□□ 0.4
CLSTN3-213ENST00000541953 MRE11P49959 708 aa17.57■□□□□ 0.4
CLSTN3-213ENST00000541953 BMP2KLQ5H9B9 411 aa17.57■□□□□ 0.4
CLSTN3-213ENST00000541953 ZNF484Q5JVG2 852 aa17.57■□□□□ 0.4
CLSTN3-213ENST00000541953 FAM160B1Q5W0V3 765 aa17.57■□□□□ 0.4
CLSTN3-213ENST00000541953 LINC01465Q8N7H1 131 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms